FFCP PHASE1:Hg19::chr13:100623360..100623373,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:100623360..100623373,-
|short_description=p2@ZIC5
|description=CAGE_peak_2_at_ZIC5_5end
|association_with_transcript=-388bp_to_ENST00000397451_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85416 | |EntrezGene=85416 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20322 | |HGNC=20322 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-388bp_to_ENST00000397451_5end | |||
|cluster_id=chr13:100623360..100623373,- | |||
|coexpression_cluster_id=C1024 | |||
|description=CAGE_peak_2_at_ZIC5_5end | |||
|id=chr13:100623360..100623373,- | |||
|ontology_enrichment_celltype=CL:0002322!5.38e-11!5;CL:0000047!7.64e-09!8;CL:0000540!1.94e-08!6;CL:0000031!1.94e-08!6;CL:0000404!1.94e-08!6;CL:0002319!6.78e-08!25;CL:0000133!1.19e-07!59;CL:0002603!4.69e-07!3;CL:0000128!6.05e-07!7;CL:0000126!6.05e-07!7;CL:0000127!6.05e-07!7;CL:0002453!6.05e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.44e-26;5!CL:0002321;2.42e-16;15!CL:0002603;6.60e-16;3!CL:0000540;9.85e-09;6!CL:0000404;9.85e-09;6!CL:0002319;1.16e-08;25!CL:0000128;4.44e-07;7!CL:0000126;4.44e-07;7!CL:0000127;4.44e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.47e-26,5;CL:0002603,6.63e-16,3;CL:0000047,4.98e-11,8;CL:0000133,6.52e-10,59;CL:0000540,1.00e-08,6;CL:0000031,1.00e-08,6;CL:0000404,1.00e-08,6;CL:0002319,1.18e-08,25;CL:0000221,9.45e-08,72;CL:0000128,4.44e-07,7;CL:0000126,4.44e-07,7;CL:0000127,4.44e-07,7;CL:0002453,4.44e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;9.85e-09;6!UBERON:0006215;1.80e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.44e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.83e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.68e-44!82;UBERON:0005743!1.79e-43!86;UBERON:0000073!5.25e-42!94;UBERON:0001016!5.25e-42!94;UBERON:0002346!1.36e-38!90;UBERON:0002616!1.49e-36!59;UBERON:0001049!4.16e-36!57;UBERON:0005068!4.16e-36!57;UBERON:0006241!4.16e-36!57;UBERON:0007135!4.16e-36!57;UBERON:0003075!3.12e-35!86;UBERON:0007284!3.12e-35!86;UBERON:0000955!1.43e-34!69;UBERON:0006238!1.43e-34!69;UBERON:0001893!4.97e-29!34;UBERON:0001869!1.50e-28!32;UBERON:0002791!1.71e-27!33;UBERON:0000924!5.71e-27!173;UBERON:0006601!5.71e-27!173;UBERON:0000956!9.91e-27!25;UBERON:0000203!9.91e-27!25;UBERON:0003056!3.28e-26!61;UBERON:0002020!3.31e-26!34;UBERON:0003528!3.31e-26!34;UBERON:0000033!4.71e-26!123;UBERON:0002619!3.57e-25!22;UBERON:0002780!4.89e-25!41;UBERON:0001890!4.89e-25!41;UBERON:0006240!4.89e-25!41;UBERON:0004121!2.06e-24!169;UBERON:0003080!2.94e-24!42;UBERON:0000153!3.75e-24!129;UBERON:0007811!3.75e-24!129;UBERON:0001950!5.86e-22!20;UBERON:0004733!8.61e-14!12;UBERON:0002028!8.61e-14!12;UBERON:0007277!8.61e-14!12;UBERON:0003076!4.81e-13!15;UBERON:0003057!4.81e-13!15;UBERON:0004732!1.52e-12!13;UBERON:0000200!1.71e-11!6;UBERON:0007023!1.87e-10!115;UBERON:0002680!9.35e-10!9;UBERON:0001895!9.35e-10!9;UBERON:0010092!9.35e-10!9;UBERON:0002037!1.09e-08!6;UBERON:0006215!1.09e-08!6;UBERON:0001871!3.11e-08!7;UBERON:0000488!2.46e-07!4;UBERON:0000064!7.04e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.47e-21;6!UBERON:0004733;1.84e-14;12!UBERON:0002028;1.84e-14;12!UBERON:0002680;9.04e-14;9!UBERON:0001895;9.04e-14;9!UBERON:0004732;2.63e-13;13!UBERON:0000073;7.28e-11;53!UBERON:0002616;7.28e-11;53!UBERON:0002771;8.69e-11;2!UBERON:0001017;5.73e-09;75!UBERON:0000200;6.64e-08;6!UBERON:0002619;3.37e-07;22!UBERON:0001893;8.55e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.84e-24,89;UBERON:0001017,8.13e-22,81;UBERON:0002037,7.74e-21,6;UBERON:0006215,7.74e-21,6;UBERON:0001049,1.79e-18,56;UBERON:0005068,1.79e-18,56;UBERON:0006241,1.79e-18,56;UBERON:0007135,1.79e-18,56;UBERON:0000073,4.08e-17,53;UBERON:0002616,4.08e-17,53;UBERON:0003076,1.93e-15,15;UBERON:0003057,1.93e-15,15;UBERON:0004733,1.99e-14,12;UBERON:0002028,1.99e-14,12;UBERON:0007277,1.99e-14,12;UBERON:0000955,2.05e-14,68;UBERON:0006238,2.05e-14,68;UBERON:0002346,3.55e-14,86;UBERON:0002680,7.92e-14,9;UBERON:0001895,7.92e-14,9;UBERON:0010092,7.92e-14,9;UBERON:0004732,2.82e-13,13;UBERON:0004121,1.90e-12,171;UBERON:0000924,1.90e-12,171;UBERON:0006601,1.90e-12,171;UBERON:0003075,1.30e-11,82;UBERON:0007284,1.30e-11,82;UBERON:0002771,7.88e-11,2;UBERON:0010371,1.74e-08,104;UBERON:0002780,7.08e-08,41;UBERON:0001890,7.08e-08,41;UBERON:0003080,7.08e-08,41;UBERON:0006240,7.08e-08,41;UBERON:0000200,7.51e-08,6;UBERON:0001893,1.09e-07,34;UBERON:0011216,1.84e-07,223;UBERON:0002619,4.19e-07,22;UBERON:0010314,5.55e-07,132 | |||
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| ||
|short_description=p2@ZIC5 | |||
}} | }} |
Latest revision as of 07:38, 16 September 2015
Short description: | p2@ZIC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZIC5_5end |
Coexpression cluster: | C1024_Pericytes_cerebellum_neuroblastoma_HES3GFP_iPS_extraskeletal_teratocarcinoma |
Association with transcript: | -388bp_to_ENST00000397451_5end |
EntrezGene: | ZIC5 |
HGNC: | 20322 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.47e-26 | 5 |
astrocyte of the cerebellum | 6.63e-16 | 3 |
neuronal stem cell | 4.98e-11 | 8 |
neurectodermal cell | 6.52e-10 | 59 |
neuron | 1.00e-08 | 6 |
neuroblast | 1.00e-08 | 6 |
electrically signaling cell | 1.00e-08 | 6 |
neural cell | 1.18e-08 | 25 |
ectodermal cell | 9.45e-08 | 72 |
oligodendrocyte | 4.44e-07 | 7 |
macroglial cell | 4.44e-07 | 7 |
astrocyte | 4.44e-07 | 7 |
oligodendrocyte precursor cell | 4.44e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.83e-08 | 10 |