FFCP PHASE1:Hg19::chr20:43030047..43030056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3172 | |EntrezGene=3172 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5024 | |HGNC=5024 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=123bp_to_uc010ggq.2_5end | |association_with_transcript=123bp_to_uc010ggq.2_5end | ||
|cluster_id=chr20:43030047..43030056,+ | |||
|coexpression_cluster_id=C3944 | |coexpression_cluster_id=C3944 | ||
|description=CAGE_peak_7_at_HNF4A_5end | |description=CAGE_peak_7_at_HNF4A_5end | ||
|id=chr20:43030047..43030056,+ | |id=chr20:43030047..43030056,+ | ||
|ontology_enrichment_celltype=CL:0000182;2.94e-14;12 | |ontology_enrichment_celltype=CL:0000181!3.70e-19!12;CL:0000417!3.70e-19!12;CL:0000668!3.70e-19!12;CL:0000414!3.70e-19!12;CL:0000412!3.70e-19!12;CL:0000182!3.70e-19!12;CL:0000223!7.51e-09!59 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;2.94e-14;12 | ||
| | |ontology_enrichment_celltype_v019_2=CL:0000182,3.14e-14,12 | ||
|ontology_enrichment_uberon=UBERON:0002107;2.17e-09;19!UBERON:0006925;2.17e-09;19!UBERON:0002423;2.28e-07;25!UBERON:0005172;4.53e-07;52!UBERON:0005173;4.53e-07;52 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!6.62e-19!23;UBERON:0002107!4.11e-17!19;UBERON:0006925!4.11e-17!19;UBERON:0008836!4.11e-17!19;UBERON:0009856!1.21e-16!26;UBERON:0001155!3.24e-16!9;UBERON:0008835!1.01e-14!22;UBERON:0003894!1.01e-14!22;UBERON:0000059!2.59e-13!11;UBERON:0007499!6.62e-13!25;UBERON:0009497!6.62e-13!25;UBERON:0000015!6.62e-13!25;UBERON:0002423!6.62e-13!25;UBERON:0006235!6.62e-13!25;UBERON:0004161!6.62e-13!25;UBERON:0005057!2.16e-12!26;UBERON:0005172!2.58e-12!55;UBERON:0005173!2.58e-12!55;UBERON:0000160!4.28e-11!27;UBERON:0002417!5.59e-11!61;UBERON:0000916!5.59e-11!61;UBERON:0001154!2.28e-10!1;UBERON:0001153!2.28e-10!1;UBERON:0002365!2.55e-10!31;UBERON:0002330!2.55e-10!31;UBERON:0001301!3.01e-10!1;UBERON:0003929!7.60e-10!54;UBERON:0004921!1.20e-09!129;UBERON:0004185!1.20e-09!129;UBERON:0000949!2.87e-09!45;UBERON:0002368!4.36e-09!35;UBERON:0005409!1.56e-08!35;UBERON:0004907!4.53e-08!5;UBERON:0001007!1.12e-07!155;UBERON:0001555!1.12e-07!155;UBERON:0007026!1.12e-07!155;UBERON:0005177!4.66e-07!107;UBERON:0002530!6.54e-07!59;UBERON:0004119!7.22e-07!169;UBERON:0000925!7.22e-07!169;UBERON:0006595!7.22e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.17e-09;19!UBERON:0006925;2.17e-09;19!UBERON:0002423;2.28e-07;25!UBERON:0005172;4.53e-07;52!UBERON:0005173;4.53e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.26e-09,19;UBERON:0006925,2.26e-09,19;UBERON:0008836,2.26e-09,19;UBERON:0008835,3.15e-08,22;UBERON:0003894,3.15e-08,22;UBERON:0009854,6.52e-08,23;UBERON:0005172,2.08e-07,54;UBERON:0005173,2.08e-07,54;UBERON:0007499,2.35e-07,25;UBERON:0009497,2.35e-07,25;UBERON:0000015,2.35e-07,25;UBERON:0002423,2.35e-07,25;UBERON:0006235,2.35e-07,25;UBERON:0004161,2.35e-07,25;UBERON:0009856,4.15e-07,26;UBERON:0002417,9.72e-07,60;UBERON:0000916,9.72e-07,60 | |||
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|short_description=p7@HNF4A | |short_description=p7@HNF4A | ||
}} | }} |
Latest revision as of 08:02, 16 September 2015
Short description: | p7@HNF4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HNF4A_5end |
Coexpression cluster: | C3944_Hepatocyte_kidney_xeroderma_epididymis_acute_diaphragm_colon |
Association with transcript: | 123bp_to_uc010ggq.2_5end |
EntrezGene: | HNF4A |
HGNC: | 5024 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.14e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.26e-09 | 19 |
digestive gland | 2.26e-09 | 19 |
liver bud | 2.26e-09 | 19 |
hepatic diverticulum | 3.15e-08 | 22 |
liver primordium | 3.15e-08 | 22 |
digestive tract diverticulum | 6.52e-08 | 23 |
abdomen element | 2.08e-07 | 54 |
abdominal segment element | 2.08e-07 | 54 |
epithelial sac | 2.35e-07 | 25 |
epithelium of foregut-midgut junction | 2.35e-07 | 25 |
anatomical boundary | 2.35e-07 | 25 |
hepatobiliary system | 2.35e-07 | 25 |
foregut-midgut junction | 2.35e-07 | 25 |
septum transversum | 2.35e-07 | 25 |
sac | 4.15e-07 | 26 |
abdominal segment of trunk | 9.72e-07 | 60 |
abdomen | 9.72e-07 | 60 |