FFCP PHASE1:Hg19::chr1:116311323..116311346,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=845 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1513 | |||
|TSSclassifier=strong | |||
|UniProt=B4DIB0 | |||
|association_with_transcript=0bp_to_ENST00000456138_5end | |||
|cluster_id=chr1:116311323..116311346,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_CASQ2_5end | |||
|id=chr1:116311323..116311346,- | |||
|ontology_enrichment_celltype=CL:0000188!2.93e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.45e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.38e-10,9 | |||
|ontology_enrichment_development_v019=UBERON:0006603;3.89e-09;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.63e-85!115;UBERON:0001049!6.71e-26!57;UBERON:0005068!6.71e-26!57;UBERON:0006241!6.71e-26!57;UBERON:0007135!6.71e-26!57;UBERON:0002616!1.52e-21!59;UBERON:0003075!7.88e-21!86;UBERON:0007284!7.88e-21!86;UBERON:0001017!7.66e-20!82;UBERON:0005743!1.21e-19!86;UBERON:0002346!2.50e-19!90;UBERON:0000955!7.79e-19!69;UBERON:0006238!7.79e-19!69;UBERON:0003080!6.31e-18!42;UBERON:0002780!6.61e-17!41;UBERON:0001890!6.61e-17!41;UBERON:0006240!6.61e-17!41;UBERON:0000073!1.27e-16!94;UBERON:0001016!1.27e-16!94;UBERON:0001893!4.69e-15!34;UBERON:0002020!7.76e-15!34;UBERON:0003528!7.76e-15!34;UBERON:0000153!7.97e-15!129;UBERON:0007811!7.97e-15!129;UBERON:0002791!4.03e-14!33;UBERON:0001869!2.56e-13!32;UBERON:0000481!6.24e-13!347;UBERON:0000033!1.14e-12!123;UBERON:0003056!3.96e-11!61;UBERON:0004121!7.84e-11!169;UBERON:0000924!2.87e-10!173;UBERON:0006601!2.87e-10!173;UBERON:0002308!2.90e-10!9;UBERON:0000125!2.90e-10!9;UBERON:0000475!8.44e-10!365;UBERON:0003076!3.04e-09!15;UBERON:0003057!3.04e-09!15;UBERON:0002619!3.76e-09!22;UBERON:0001950!6.75e-09!20;UBERON:0000468!6.99e-09!659;UBERON:0000483!1.47e-08!309;UBERON:0009663!2.17e-08!7;UBERON:0000119!2.64e-08!312;UBERON:0004111!3.24e-08!241;UBERON:0000922!3.70e-08!612;UBERON:0000477!3.74e-08!286;UBERON:0002420!4.68e-08!9;UBERON:0007245!4.68e-08!9;UBERON:0010009!4.68e-08!9;UBERON:0010011!4.68e-08!9;UBERON:0000454!4.68e-08!9;UBERON:0002298!9.99e-08!8;UBERON:0000956!1.07e-07!25;UBERON:0000203!1.07e-07!25;UBERON:0002050!1.49e-07!605;UBERON:0005423!1.49e-07!605;UBERON:0000467!1.89e-07!625;UBERON:0000480!2.17e-07!626;UBERON:0000062!3.01e-07!511;UBERON:0000923!3.58e-07!604;UBERON:0005291!3.58e-07!604;UBERON:0006598!3.58e-07!604;UBERON:0002532!3.58e-07!604;UBERON:0000025!4.17e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;9.40e-20;16!UBERON:0002036;9.40e-20;16!UBERON:0007023;3.31e-15;114!UBERON:0002385;1.71e-11;31!UBERON:0001015;1.71e-11;31!UBERON:0000383;1.71e-11;31!UBERON:0004151;6.65e-08;3!UBERON:0003978;8.66e-08;3!UBERON:0000946;8.66e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.42e-59,114;UBERON:0004151,6.66e-08,3;UBERON:0003978,8.67e-08,3;UBERON:0009751,8.67e-08,3;UBERON:0000946,8.67e-08,3;UBERON:0002523,8.67e-08,3;UBERON:0005983,8.67e-08,3;UBERON:0002165,8.67e-08,3;UBERON:0002062,8.67e-08,3;UBERON:0007280,8.67e-08,3;UBERON:0001049,1.08e-07,56;UBERON:0005068,1.08e-07,56;UBERON:0006241,1.08e-07,56;UBERON:0007135,1.08e-07,56;UBERON:0000073,2.43e-07,53;UBERON:0002616,2.43e-07,53;UBERON:0010314,2.49e-07,132;UBERON:0003075,7.00e-07,82;UBERON:0007284,7.00e-07,82 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83370705696798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32997005335432,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,8.23544217146054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,5.7035723792352,2.31072925671967,3.99109554287937,6.20264576180388,0.107420244868274,4.35050081742686,10.9090083092609,188.56985149979,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4276379832077,0,0,0,0,0,0,0,0.281338832821026,0,0,0,18.5300629073495,4.97311047956066,0,0,0,0,0,0,0,66.9788724274779,0,0,0.969332746095218,0.927680981618513,0,0,0,3.62499787717397,0,0,0,0,0,0,0.885741385813839,0.60298219312704,1.52581736317083,2.65390223834939,4.43321428430321,3.29078095730959,0,0,8.38757817691388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.95735737970654,9.37650183735395,3.05515072466813,0,0,0,1.7524294574976,116.373758858324,0,0,0,0,1.57833761139756,1.20990716048664,0,12.0054501294127,0,0,0,0,0,0,0,0,0,0,0,15.0264934688146,0,0,0,0,28.5147708475953,0,24.4059200042975,0,0,1.51945910294109,0,0,3.84215390530835,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,125.956362973787,262.617845917389,27.2791749339189,231.028603577333,649.848236878768,313.779069163273,542.170622967881,0.720599767084807,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,1.64023802976667,0,1.26089131678717,0.0524545881349981,0,0,0,381.647304283378,448.236263937397,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.3223260174269,0,0,3.20362237703084,4.87333345808964,1.24271716604159,0,0,0,0,1.08803560673895,7.520696820681,1.22538230705385,1.31149052283922,0,0,0.366078794705889,0.1251909307065,0,0.998361463831671,3.35320575883471,0,0,0,0,0,0,0,0,0,0,0.189403005275089,1.0062716070103,1.77962244319307,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11956442818316,0,0.159633859057151,0.615349092722265,0,1.03735878696327,1.93770774758221,0,0,0,0,0,0,0,0,9.47650137200641,0,0,0,0,0,1.68843961545987,0.781078098613847,0,1.71222687523548,0,3.28954660114309,55.575651979601,0,0,0,2.35398605553177,0.606965604236632,0,0.887023701626388,0,0,1.90315252335129,1.18390992413128,0,0,28.257513426185,0.471346769748006,0,1.82631744101899,0,0,11.1503408915584,0,0,0,0,0,0,0,1.29068207646083,0,0,2.11693525095465,0,0,0,0,0,0,63.4480260444137,136.438870311952,293.433051128564,74.7994929311075,0,0,0,0,0,0,5.55653938377201,0.655678681511872,0,92.1757689794685,0,0.588925401344836,0.891139200981258,5.0718687310008,0,0.0939839179798536,0.0644578879735772,0,0,0,0,7.30336388246517,3.21110498383179,0.573358332605805,0,1.01987235286372,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,4.92561538418556,0.267964130156178,6.63335551567024,0.310298987585686,46.2717740725129,121.650924477971,0.193766729508018,1.48979314310059,0,3.75518233841173,11.5206797706185,44.6319333188771,241.274477265123,5.99433271829829,8.53494244172849,35.9273185069694,0,0,0,0,107.934833505589,12.2241444182866,2.03448089157869,5.99181096766961,6.44076139491284,0 | |||
|short_description=p1@CASQ2 | |||
}} |
Latest revision as of 08:07, 16 September 2015
Short description: | p1@CASQ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CASQ2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000456138_5end |
EntrezGene: | CASQ2 |
HGNC: | 1513 |
UniProt: | B4DIB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.38e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.42e-59 | 114 |
cardiac chamber | 6.66e-08 | 3 |
valve | 8.67e-08 | 3 |
cardiac mesenchyme | 8.67e-08 | 3 |
cardial valve | 8.67e-08 | 3 |
tunica intima | 8.67e-08 | 3 |
heart layer | 8.67e-08 | 3 |
endocardium | 8.67e-08 | 3 |
endocardial cushion | 8.67e-08 | 3 |
presumptive endocardium | 8.67e-08 | 3 |
neural tube | 1.08e-07 | 56 |
neural rod | 1.08e-07 | 56 |
future spinal cord | 1.08e-07 | 56 |
neural keel | 1.08e-07 | 56 |
regional part of nervous system | 2.43e-07 | 53 |
regional part of brain | 2.43e-07 | 53 |
structure with developmental contribution from neural crest | 2.49e-07 | 132 |
neural plate | 7.00e-07 | 82 |
presumptive neural plate | 7.00e-07 | 82 |