FFCP PHASE1:Hg19::chr8:130253461..130253480,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=728724 | |EntrezGene=728724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_NR_033916_5end | |association_with_transcript=5bp_to_NR_033916_5end | ||
|cluster_id=chr8:130253461..130253480,- | |||
|coexpression_cluster_id=C141 | |coexpression_cluster_id=C141 | ||
|description=CAGE_peak_2_at_LOC728724_5end | |description=CAGE_peak_2_at_LOC728724_5end | ||
|id=chr8:130253461..130253480,- | |id=chr8:130253461..130253480,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000817;2.37e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,9.90e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.74e-15;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2531;3.83e-07;51!DOID:0060083;3.83e-07;51!DOID:1240;3.91e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.13e-09,51;DOID:0060083,2.13e-09,51;DOID:1240,3.11e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.42e-14!7;UBERON:0002370!8.65e-12!4;UBERON:0005058!8.65e-12!4;UBERON:0009113!8.65e-12!4;UBERON:0003295!8.65e-12!4;UBERON:0005562!8.65e-12!4;UBERON:0000974!2.92e-10!10;UBERON:0003351!3.77e-08!6 | |ontology_enrichment_uberon=UBERON:0004177!2.42e-14!7;UBERON:0002370!8.65e-12!4;UBERON:0005058!8.65e-12!4;UBERON:0009113!8.65e-12!4;UBERON:0003295!8.65e-12!4;UBERON:0005562!8.65e-12!4;UBERON:0000974!2.92e-10!10;UBERON:0003351!3.77e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.58e-57;2!UBERON:0005058;3.58e-57;2!UBERON:0009113;3.58e-57;2!UBERON:0004177;1.28e-23;5!UBERON:0005057;1.28e-23;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.16e-29,4;UBERON:0005058,3.16e-29,4;UBERON:0009113,3.16e-29,4;UBERON:0003295,3.16e-29,4;UBERON:0005562,3.16e-29,4;UBERON:0003351,7.13e-20,6;UBERON:0004177,3.42e-17,7;UBERON:0005057,3.42e-17,7;UBERON:0000974,2.37e-12,10;UBERON:0003408,2.37e-12,10;UBERON:0001042,2.37e-12,10;UBERON:0009145,2.37e-12,10;UBERON:0006562,2.55e-11,11;UBERON:0009722,2.55e-11,11;UBERON:0007690,2.55e-11,11;UBERON:0008814,2.77e-07,18;UBERON:0001557,6.01e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5780276607816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94469120453958,36.6380493244333,2.71024663638998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,15.3721605409695,12.8494658592426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5780276607816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94469120453958,36.6380493244333,2.71024663638998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,15.3721605409695,12.8494658592426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | ||
|short_description=p2@LOC728724 | |short_description=p2@LOC728724 | ||
}} | }} |
Latest revision as of 08:27, 16 September 2015
Short description: | p2@LOC728724 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC728724_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | 5bp_to_NR_033916_5end |
EntrezGene: | LOC728724 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.16e-29 | 4 |
hemolymphoid system gland | 3.16e-29 | 4 |
thymic region | 3.16e-29 | 4 |
pharyngeal gland | 3.16e-29 | 4 |
thymus primordium | 3.16e-29 | 4 |
pharyngeal epithelium | 7.13e-20 | 6 |
hemopoietic organ | 3.42e-17 | 7 |
immune organ | 3.42e-17 | 7 |
neck | 2.37e-12 | 10 |
gland of gut | 2.37e-12 | 10 |
chordate pharynx | 2.37e-12 | 10 |
pharyngeal region of foregut | 2.37e-12 | 10 |
pharynx | 2.55e-11 | 11 |
entire pharyngeal arch endoderm | 2.55e-11 | 11 |
early pharyngeal endoderm | 2.55e-11 | 11 |
pharyngeal arch system | 2.77e-07 | 18 |
upper respiratory tract | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.13e-09 | 51 |
immune system cancer | 2.13e-09 | 51 |
leukemia | 3.11e-07 | 39 |