FFCP PHASE1:Hg19::chr19:1592714..1592762,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53615 | |EntrezGene=53615 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6918 | |HGNC=6918 | ||
|TSSclassifier=strong | |||
|UniProt=O95983 | |UniProt=O95983 | ||
|association_with_transcript=-4bp_to_ENST00000434436,uc002ltk.2_5end | |association_with_transcript=-4bp_to_ENST00000434436,uc002ltk.2_5end | ||
|cluster_id=chr19:1592714..1592762,- | |||
|description=CAGE_peak_1_at_MBD3_5end | |description=CAGE_peak_1_at_MBD3_5end | ||
|id=chr19:1592714..1592762,- | |id=chr19:1592714..1592762,- | ||
|ontology_enrichment_celltype=CL:0002321!8.49e-18!248;CL:0000220!3.47e-17!246;CL:0000548!8.48e-17!679;CL:0000004!8.48e-17!679;CL:0000255!8.48e-17!679;CL:0000012!9.71e-17!682;CL:0000066!1.31e-15!254;CL:0000133!1.09e-11!59;CL:0000144!4.15e-11!625;CL:0000333!1.46e-10!41;CL:0000221!3.25e-09!71;CL:0000115!1.01e-08!35;CL:0002078!1.54e-08!44;CL:0002319!1.64e-08!25;CL:0000055!2.79e-08!180;CL:0002371!4.14e-08!591;CL:0000213!1.37e-07!57;CL:0000215!1.37e-07!57;CL:0000003!2.47e-07!722;CL:0000222!3.34e-07!119 | |ontology_enrichment_celltype=CL:0002321!8.49e-18!248;CL:0000220!3.47e-17!246;CL:0000548!8.48e-17!679;CL:0000004!8.48e-17!679;CL:0000255!8.48e-17!679;CL:0000012!9.71e-17!682;CL:0000066!1.31e-15!254;CL:0000133!1.09e-11!59;CL:0000144!4.15e-11!625;CL:0000333!1.46e-10!41;CL:0000221!3.25e-09!71;CL:0000115!1.01e-08!35;CL:0002078!1.54e-08!44;CL:0002319!1.64e-08!25;CL:0000055!2.79e-08!180;CL:0002371!4.14e-08!591;CL:0000213!1.37e-07!57;CL:0000215!1.37e-07!57;CL:0000003!2.47e-07!722;CL:0000222!3.34e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.33e-08;25!CL:0000115;1.82e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.07e-18,250;CL:0000066,1.03e-15,253;CL:0000133,1.08e-11,59;CL:0000333,1.45e-10,41;CL:0000221,3.47e-09,72;CL:0000115,4.39e-09,36;CL:0002078,6.97e-09,45;CL:0002319,1.64e-08,25;CL:0000213,6.43e-08,58;CL:0000215,6.43e-08,58;CL:0000222,2.32e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.02e-16!235;DOID:14566!6.93e-16!239;DOID:2531!2.11e-09!51;DOID:0060083!2.11e-09!51;DOID:0050686!3.86e-08!137;DOID:0050687!5.54e-08!143;DOID:1240!1.19e-07!39;DOID:8692!9.44e-07!31 | |ontology_enrichment_disease=DOID:162!1.02e-16!235;DOID:14566!6.93e-16!239;DOID:2531!2.11e-09!51;DOID:0060083!2.11e-09!51;DOID:0050686!3.86e-08!137;DOID:0050687!5.54e-08!143;DOID:1240!1.19e-07!39;DOID:8692!9.44e-07!31 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.02e-16,235;DOID:14566,6.91e-16,239;DOID:2531,2.10e-09,51;DOID:0060083,2.10e-09,51;DOID:0050686,3.86e-08,137;DOID:0050687,5.53e-08,143;DOID:1240,1.19e-07,39;DOID:8692,9.43e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000490;7.87e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,7.47e-07,148 | |||
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| ||
|short_description=p1@MBD3 | |short_description=p1@MBD3 | ||
}} | }} |
Latest revision as of 08:30, 16 September 2015
Short description: | p1@MBD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MBD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000434436, uc002ltk.2_5end |
EntrezGene: | MBD3 |
HGNC: | 6918 |
UniProt: | O95983 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.07e-18 | 250 |
epithelial cell | 1.03e-15 | 253 |
neurectodermal cell | 1.08e-11 | 59 |
migratory neural crest cell | 1.45e-10 | 41 |
ectodermal cell | 3.47e-09 | 72 |
endothelial cell | 4.39e-09 | 36 |
meso-epithelial cell | 6.97e-09 | 45 |
neural cell | 1.64e-08 | 25 |
lining cell | 6.43e-08 | 58 |
barrier cell | 6.43e-08 | 58 |
mesodermal cell | 2.32e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 7.47e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.02e-16 | 235 |
disease of cellular proliferation | 6.91e-16 | 239 |
hematologic cancer | 2.10e-09 | 51 |
immune system cancer | 2.10e-09 | 51 |
organ system cancer | 3.86e-08 | 137 |
cell type cancer | 5.53e-08 | 143 |
leukemia | 1.19e-07 | 39 |
myeloid leukemia | 9.43e-07 | 31 |