FFCP PHASE1:Hg19::chr19:15939963..15939981,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=652995 | |EntrezGene=652995 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37126 | |HGNC=37126 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=206bp_to_ENST00000397381,NR_015379,uc002nbr.3_5end | |association_with_transcript=206bp_to_ENST00000397381,NR_015379,uc002nbr.3_5end | ||
|cluster_id=chr19:15939963..15939981,+ | |||
|coexpression_cluster_id=C2479 | |coexpression_cluster_id=C2479 | ||
|description=CAGE_peak_3_at_UCA1_5end | |description=CAGE_peak_3_at_UCA1_5end | ||
|id=chr19:15939963..15939981,+ | |id=chr19:15939963..15939981,+ | ||
|ontology_enrichment_celltype=CL:0002150!8.72e-12!3;CL:0000861!8.72e-12!3 | |ontology_enrichment_celltype=CL:0002150!8.72e-12!3;CL:0000861!8.72e-12!3 | ||
|ontology_enrichment_celltype_v019=CL:1001319;2.75e-15;1!CL:1000600;2.75e-15;1!CL:0002535;1.50e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,3.66e-15,1;CL:1000600,3.66e-15,1;CL:0002535,1.50e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.22e-21!14;DOID:305!4.33e-18!106;DOID:162!3.74e-17!235;DOID:14566!1.32e-16!239;DOID:0050687!1.57e-15!143;DOID:1036!1.62e-12!8;DOID:74!3.77e-08!2;DOID:299!6.09e-07!25 | |ontology_enrichment_disease=DOID:1749!5.22e-21!14;DOID:305!4.33e-18!106;DOID:162!3.74e-17!235;DOID:14566!1.32e-16!239;DOID:0050687!1.57e-15!143;DOID:1036!1.62e-12!8;DOID:74!3.77e-08!2;DOID:299!6.09e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.84e-16;8!DOID:4468;1.34e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.65e-16,8;DOID:4468,1.39e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000344!5.32e-15!12;UBERON:0003343!2.54e-09!4;UBERON:0004785!2.54e-09!4;UBERON:0003350!1.23e-07!5;UBERON:0003729!1.54e-07!5 | |ontology_enrichment_uberon=UBERON:0000344!5.32e-15!12;UBERON:0003343!2.54e-09!4;UBERON:0004785!2.54e-09!4;UBERON:0003350!1.23e-07!5;UBERON:0003729!1.54e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.75e-15;1!UBERON:0001256;2.75e-15;1!UBERON:0001259;2.75e-15;1!UBERON:0006955;1.50e-08;2!UBERON:0004801;1.50e-08;2!UBERON:0001255;2.67e-08;2!UBERON:0001556;2.67e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.66e-15,1;UBERON:0001256,3.66e-15,1;UBERON:0001259,3.66e-15,1;UBERON:0006955,1.50e-08,2;UBERON:0004801,1.50e-08,2;UBERON:0001255,3.08e-08,2;UBERON:0001556,3.08e-08,2 | |||
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| ||
|short_description=p3@UCA1 | |short_description=p3@UCA1 | ||
}} | }} |
Latest revision as of 08:33, 16 September 2015
Short description: | p3@UCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UCA1_5end |
Coexpression cluster: | C2479_Wilms_clear_rectal_chorionic_epidermoid_acantholytic_liposarcoma |
Association with transcript: | 206bp_to_ENST00000397381, NR_015379, uc002nbr.3_5end |
EntrezGene: | UCA1 |
HGNC: | 37126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 3.66e-15 | 1 |
lower urinary tract cell | 3.66e-15 | 1 |
epithelial cell of cervix | 1.50e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 3.66e-15 | 1 |
wall of urinary bladder | 3.66e-15 | 1 |
mucosa of urinary bladder | 3.66e-15 | 1 |
uterine epithelium | 1.50e-08 | 2 |
cervix epithelium | 1.50e-08 | 2 |
urinary bladder | 3.08e-08 | 2 |
lower urinary tract | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.65e-16 | 8 |
clear cell adenocarcinoma | 1.39e-08 | 2 |