FFCP PHASE1:Hg19::chr6:154831810..154831825,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=154043 | |EntrezGene=154043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23034 | |HGNC=23034 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P9H4 | |UniProt=Q6P9H4 | ||
|association_with_transcript=-17bp_to_ENST00000367213_5end | |association_with_transcript=-17bp_to_ENST00000367213_5end | ||
|cluster_id=chr6:154831810..154831825,- | |||
|coexpression_cluster_id=C97 | |coexpression_cluster_id=C97 | ||
|description=CAGE_peak_3_at_CNKSR3_5end | |description=CAGE_peak_3_at_CNKSR3_5end | ||
|id=chr6:154831810..154831825,- | |id=chr6:154831810..154831825,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.98e-07;10!CL:1000494;3.98e-07;10!CL:1000497;7.85e-07;17!CL:0002518;7.85e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.04e-07,10;CL:1000494,4.04e-07,10;CL:1000497,8.59e-07,17;CL:0002518,8.59e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.57e-11;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!3.01e-14!286;UBERON:0000481!5.63e-13!347;UBERON:0007023!1.71e-11!115;UBERON:0004111!4.90e-11!241;UBERON:0005172!8.00e-10!55;UBERON:0005173!8.00e-10!55;UBERON:0000475!1.03e-09!365;UBERON:0000489!3.48e-09!32;UBERON:0005743!2.09e-08!86;UBERON:0000468!2.48e-08!659;UBERON:0000062!3.23e-08!511;UBERON:0005177!7.10e-08!107;UBERON:0000119!7.40e-08!312;UBERON:0000153!7.74e-08!129;UBERON:0007811!7.74e-08!129;UBERON:0001017!7.78e-08!82;UBERON:0000033!8.79e-08!123;UBERON:0004121!8.81e-08!169;UBERON:0000025!9.31e-08!194;UBERON:0000064!1.19e-07!219;UBERON:0000073!1.25e-07!94;UBERON:0001016!1.25e-07!94;UBERON:0000483!1.61e-07!309;UBERON:0000924!1.76e-07!173;UBERON:0006601!1.76e-07!173;UBERON:0003103!1.83e-07!69;UBERON:0002113!2.32e-07!27;UBERON:0003918!2.32e-07!27;UBERON:0005095!2.32e-07!27;UBERON:0007687!2.32e-07!27;UBERON:0002417!4.20e-07!61;UBERON:0000916!4.20e-07!61;UBERON:0003075!9.75e-07!86;UBERON:0007284!9.75e-07!86 | |ontology_enrichment_uberon=UBERON:0000477!3.01e-14!286;UBERON:0000481!5.63e-13!347;UBERON:0007023!1.71e-11!115;UBERON:0004111!4.90e-11!241;UBERON:0005172!8.00e-10!55;UBERON:0005173!8.00e-10!55;UBERON:0000475!1.03e-09!365;UBERON:0000489!3.48e-09!32;UBERON:0005743!2.09e-08!86;UBERON:0000468!2.48e-08!659;UBERON:0000062!3.23e-08!511;UBERON:0005177!7.10e-08!107;UBERON:0000119!7.40e-08!312;UBERON:0000153!7.74e-08!129;UBERON:0007811!7.74e-08!129;UBERON:0001017!7.78e-08!82;UBERON:0000033!8.79e-08!123;UBERON:0004121!8.81e-08!169;UBERON:0000025!9.31e-08!194;UBERON:0000064!1.19e-07!219;UBERON:0000073!1.25e-07!94;UBERON:0001016!1.25e-07!94;UBERON:0000483!1.61e-07!309;UBERON:0000924!1.76e-07!173;UBERON:0006601!1.76e-07!173;UBERON:0003103!1.83e-07!69;UBERON:0002113!2.32e-07!27;UBERON:0003918!2.32e-07!27;UBERON:0005095!2.32e-07!27;UBERON:0007687!2.32e-07!27;UBERON:0002417!4.20e-07!61;UBERON:0000916!4.20e-07!61;UBERON:0003075!9.75e-07!86;UBERON:0007284!9.75e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000489;2.31e-11;29!UBERON:0002113;7.57e-09;24!UBERON:0011143;7.57e-09;24!UBERON:0006554;9.89e-08;30!UBERON:0001008;9.89e-08;30!UBERON:0004211;3.98e-07;10!UBERON:0009773;3.98e-07;10!UBERON:0001231;3.98e-07;10!UBERON:0004810;3.98e-07;10!UBERON:0005172;7.64e-07;52!UBERON:0005173;7.64e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,8.41e-13,31;UBERON:0005172,8.51e-11,54;UBERON:0005173,8.51e-11,54;UBERON:0003103,3.39e-10,68;UBERON:0011216,3.99e-10,223;UBERON:0002113,4.91e-10,26;UBERON:0003918,4.91e-10,26;UBERON:0011143,4.91e-10,26;UBERON:0005095,4.91e-10,26;UBERON:0007687,4.91e-10,26;UBERON:0002417,1.12e-08,60;UBERON:0000916,1.12e-08,60;UBERON:0007023,1.13e-08,114;UBERON:0005177,3.58e-08,101;UBERON:0004810,4.04e-07,10;UBERON:0006554,4.77e-07,47;UBERON:0001008,9.57e-07,48 | |||
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| ||
|short_description=p3@CNKSR3 | |short_description=p3@CNKSR3 | ||
}} | }} |
Latest revision as of 08:33, 16 September 2015
Short description: | p3@CNKSR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CNKSR3_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | -17bp_to_ENST00000367213_5end |
EntrezGene: | CNKSR3 |
HGNC: | 23034 |
UniProt: | Q6P9H4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.04e-07 | 10 |
nephron tubule epithelial cell | 4.04e-07 | 10 |
kidney cell | 8.59e-07 | 17 |
kidney epithelial cell | 8.59e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 8.41e-13 | 31 |
abdomen element | 8.51e-11 | 54 |
abdominal segment element | 8.51e-11 | 54 |
compound organ | 3.39e-10 | 68 |
organ system subdivision | 3.99e-10 | 223 |
kidney | 4.91e-10 | 26 |
kidney mesenchyme | 4.91e-10 | 26 |
upper urinary tract | 4.91e-10 | 26 |
kidney rudiment | 4.91e-10 | 26 |
kidney field | 4.91e-10 | 26 |
abdominal segment of trunk | 1.12e-08 | 60 |
abdomen | 1.12e-08 | 60 |
adult organism | 1.13e-08 | 114 |
trunk region element | 3.58e-08 | 101 |
nephron tubule epithelium | 4.04e-07 | 10 |
urinary system structure | 4.77e-07 | 47 |
renal system | 9.57e-07 | 48 |