FFCP PHASE1:Hg19::chr6:155334892..155334903,+: Difference between revisions
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|id=chr6:155334892..155334903,+
|short_description=p18@TIAM2
|description=CAGE_peak_18_at_TIAM2_5end
|association_with_transcript=0bp_to_ENST00000535231_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26230 | |EntrezGene=26230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11806 | |HGNC=11806 | ||
|TSSclassifier=strong | |||
|UniProt=F5H8H5 | |UniProt=F5H8H5 | ||
|association_with_transcript=0bp_to_ENST00000535231_5end | |||
|cluster_id=chr6:155334892..155334903,+ | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_18_at_TIAM2_5end | |||
|id=chr6:155334892..155334903,+ | |||
|ontology_enrichment_celltype=CL:0000047!8.48e-26!8;CL:0000540!9.12e-20!6;CL:0000031!9.12e-20!6;CL:0000404!9.12e-20!6;CL:0002319!1.78e-16!25;CL:0000133!4.24e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.30e-38;6!CL:0000404;6.30e-38;6!CL:0002319;2.95e-15;25!CL:0000047;7.30e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.86e-50,8;CL:0000540,6.30e-38,6;CL:0000031,6.30e-38,6;CL:0000404,6.30e-38,6;CL:0002319,2.95e-15,25;CL:0000133,5.60e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;6.30e-38;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.13e-16!82;UBERON:0005743!7.44e-16!86;UBERON:0000073!2.94e-14!94;UBERON:0001016!2.94e-14!94;UBERON:0000955!5.69e-08!69;UBERON:0006238!5.69e-08!69;UBERON:0004121!2.03e-07!169;UBERON:0000924!3.23e-07!173;UBERON:0006601!3.23e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;1.81e-09;2!UBERON:0000922;1.33e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.11e-14,81;UBERON:0001016,3.00e-13,89;UBERON:0002114,1.81e-09,2;UBERON:0004121,5.65e-07,171;UBERON:0000924,5.65e-07,171;UBERON:0006601,5.65e-07,171;UBERON:0011216,6.23e-07,223 | |||
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|short_description=p18@TIAM2 | |||
}} | }} |
Latest revision as of 08:48, 16 September 2015
Short description: | p18@TIAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TIAM2_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 0bp_to_ENST00000535231_5end |
EntrezGene: | TIAM2 |
HGNC: | 11806 |
UniProt: | F5H8H5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.86e-50 | 8 |
neuron | 6.30e-38 | 6 |
neuroblast | 6.30e-38 | 6 |
electrically signaling cell | 6.30e-38 | 6 |
neural cell | 2.95e-15 | 25 |
neurectodermal cell | 5.60e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.11e-14 | 81 |
nervous system | 3.00e-13 | 89 |
duodenum | 1.81e-09 | 2 |
ectoderm-derived structure | 5.65e-07 | 171 |
ectoderm | 5.65e-07 | 171 |
presumptive ectoderm | 5.65e-07 | 171 |
organ system subdivision | 6.23e-07 | 223 |