FFCP PHASE1:Hg19::chr16:3070336..3070347,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51330 | |EntrezGene=51330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18152 | |HGNC=18152 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP84 | |UniProt=Q9NP84 | ||
|association_with_transcript=23bp_to_ENST00000326577,NM_016639,uc002csv.3,uc002csw.3_5end | |association_with_transcript=23bp_to_ENST00000326577,NM_016639,uc002csv.3,uc002csw.3_5end | ||
|cluster_id=chr16:3070336..3070347,+ | |||
|coexpression_cluster_id=C1761 | |||
|description=CAGE_peak_2_at_TNFRSF12A_5end | |description=CAGE_peak_2_at_TNFRSF12A_5end | ||
|id=chr16:3070336..3070347,+ | |id=chr16:3070336..3070347,+ | ||
|ontology_enrichment_celltype=CL:0000220!5.39e-31!246;CL:0002321!5.56e-31!248;CL:0000548!2.90e-29!679;CL:0000004!2.90e-29!679;CL:0000255!2.90e-29!679;CL:0000012!3.81e-28!682;CL:0000055!1.31e-27!180;CL:0000066!1.39e-24!254;CL:0000144!8.03e-19!625;CL:0000222!3.65e-18!119;CL:0002371!2.32e-15!591;CL:0000003!2.86e-15!722;CL:0000680!5.50e-14!57;CL:0000056!5.50e-14!57;CL:0000355!5.50e-14!57;CL:0000183!1.23e-13!59;CL:0000187!5.43e-13!54;CL:0000192!7.20e-13!42;CL:0000514!7.20e-13!42;CL:0000393!8.00e-13!60;CL:0000211!8.00e-13!60;CL:0000057!1.52e-11!75;CL:0000359!2.82e-11!32;CL:0000063!6.83e-09!578;CL:1000497!5.32e-07!18;CL:0002518!5.32e-07!18;CL:0000076!6.74e-07!62;CL:0000221!6.80e-07!71;CL:0000077!9.55e-07!19 | |ontology_enrichment_celltype=CL:0000220!5.39e-31!246;CL:0002321!5.56e-31!248;CL:0000548!2.90e-29!679;CL:0000004!2.90e-29!679;CL:0000255!2.90e-29!679;CL:0000012!3.81e-28!682;CL:0000055!1.31e-27!180;CL:0000066!1.39e-24!254;CL:0000144!8.03e-19!625;CL:0000222!3.65e-18!119;CL:0002371!2.32e-15!591;CL:0000003!2.86e-15!722;CL:0000680!5.50e-14!57;CL:0000056!5.50e-14!57;CL:0000355!5.50e-14!57;CL:0000183!1.23e-13!59;CL:0000187!5.43e-13!54;CL:0000192!7.20e-13!42;CL:0000514!7.20e-13!42;CL:0000393!8.00e-13!60;CL:0000211!8.00e-13!60;CL:0000057!1.52e-11!75;CL:0000359!2.82e-11!32;CL:0000063!6.83e-09!578;CL:1000497!5.32e-07!18;CL:0002518!5.32e-07!18;CL:0000076!6.74e-07!62;CL:0000221!6.80e-07!71;CL:0000077!9.55e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.40e-11;32!CL:0000192;1.77e-09;43!CL:0000187;6.78e-08;55!CL:1000497;1.31e-07;17!CL:0002518;1.31e-07;17!CL:1000449;3.38e-07;15!CL:0000077;5.43e-07;19!CL:0000134;6.87e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.32e-32,250;CL:0000066,1.15e-25,253;CL:0000222,6.45e-19,121;CL:0000680,2.27e-14,58;CL:0000056,2.27e-14,58;CL:0000355,2.27e-14,58;CL:0000187,2.47e-13,55;CL:0000393,3.51e-13,61;CL:0000211,3.51e-13,61;CL:0000192,3.79e-13,43;CL:0000514,3.79e-13,43;CL:0000057,2.36e-12,76;CL:0000359,9.71e-12,32;CL:1000497,1.38e-07,17;CL:0002518,1.38e-07,17;CL:0000076,2.30e-07,63;CL:1000449,3.34e-07,15;CL:0000221,4.01e-07,72;CL:0000077,5.39e-07,19;CL:0002076,6.86e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000514;1.77e-09;43!CL:0000355;5.96e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:193;4.11e-07;29!DOID:120;4.97e-07;27!DOID:2394;8.79e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:193,5.24e-07,29;DOID:120,6.09e-07,27;DOID:2394,8.03e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!2.97e-19!143;UBERON:0002100!1.17e-18!216;UBERON:0000486!2.41e-16!82;UBERON:0003104!3.29e-16!238;UBERON:0009142!3.29e-16!238;UBERON:0000914!8.26e-15!83;UBERON:0002329!8.26e-15!83;UBERON:0003077!8.26e-15!83;UBERON:0003059!8.26e-15!83;UBERON:0007282!8.26e-15!83;UBERON:0009618!8.26e-15!83;UBERON:0007285!8.26e-15!83;UBERON:0004290!2.76e-14!70;UBERON:0003914!2.65e-13!118;UBERON:0000475!2.27e-12!365;UBERON:0000119!4.36e-12!312;UBERON:0001134!4.68e-12!61;UBERON:0002036!4.68e-12!61;UBERON:0003082!4.68e-12!61;UBERON:0000481!7.21e-12!347;UBERON:0000490!7.96e-12!138;UBERON:0000483!1.05e-11!309;UBERON:0002385!2.11e-11!63;UBERON:0001015!2.11e-11!63;UBERON:0000383!2.11e-11!63;UBERON:0002049!8.15e-11!79;UBERON:0007798!8.15e-11!79;UBERON:0000468!9.46e-11!659;UBERON:0000467!2.92e-10!625;UBERON:0000480!4.55e-10!626;UBERON:0001048!1.03e-09!168;UBERON:0001637!1.75e-09!42;UBERON:0003509!1.75e-09!42;UBERON:0004572!1.75e-09!42;UBERON:0004872!1.95e-09!84;UBERON:0000926!3.72e-09!448;UBERON:0004120!3.72e-09!448;UBERON:0006603!3.72e-09!448;UBERON:0001981!8.78e-09!60;UBERON:0007500!8.78e-09!60;UBERON:0004537!8.78e-09!60;UBERON:0006965!8.78e-09!60;UBERON:0000055!1.39e-08!69;UBERON:0005085!2.87e-08!29;UBERON:0004573!3.30e-08!33;UBERON:0004571!3.30e-08!33;UBERON:0000923!1.03e-07!604;UBERON:0005291!1.03e-07!604;UBERON:0006598!1.03e-07!604;UBERON:0002532!1.03e-07!604;UBERON:0002050!1.39e-07!605;UBERON:0005423!1.39e-07!605;UBERON:0000922!1.59e-07!612;UBERON:0003102!2.06e-07!95;UBERON:0003100!2.21e-07!41;UBERON:0009569!6.67e-07!113 | |ontology_enrichment_uberon=UBERON:0005256!2.97e-19!143;UBERON:0002100!1.17e-18!216;UBERON:0000486!2.41e-16!82;UBERON:0003104!3.29e-16!238;UBERON:0009142!3.29e-16!238;UBERON:0000914!8.26e-15!83;UBERON:0002329!8.26e-15!83;UBERON:0003077!8.26e-15!83;UBERON:0003059!8.26e-15!83;UBERON:0007282!8.26e-15!83;UBERON:0009618!8.26e-15!83;UBERON:0007285!8.26e-15!83;UBERON:0004290!2.76e-14!70;UBERON:0003914!2.65e-13!118;UBERON:0000475!2.27e-12!365;UBERON:0000119!4.36e-12!312;UBERON:0001134!4.68e-12!61;UBERON:0002036!4.68e-12!61;UBERON:0003082!4.68e-12!61;UBERON:0000481!7.21e-12!347;UBERON:0000490!7.96e-12!138;UBERON:0000483!1.05e-11!309;UBERON:0002385!2.11e-11!63;UBERON:0001015!2.11e-11!63;UBERON:0000383!2.11e-11!63;UBERON:0002049!8.15e-11!79;UBERON:0007798!8.15e-11!79;UBERON:0000468!9.46e-11!659;UBERON:0000467!2.92e-10!625;UBERON:0000480!4.55e-10!626;UBERON:0001048!1.03e-09!168;UBERON:0001637!1.75e-09!42;UBERON:0003509!1.75e-09!42;UBERON:0004572!1.75e-09!42;UBERON:0004872!1.95e-09!84;UBERON:0000926!3.72e-09!448;UBERON:0004120!3.72e-09!448;UBERON:0006603!3.72e-09!448;UBERON:0001981!8.78e-09!60;UBERON:0007500!8.78e-09!60;UBERON:0004537!8.78e-09!60;UBERON:0006965!8.78e-09!60;UBERON:0000055!1.39e-08!69;UBERON:0005085!2.87e-08!29;UBERON:0004573!3.30e-08!33;UBERON:0004571!3.30e-08!33;UBERON:0000923!1.03e-07!604;UBERON:0005291!1.03e-07!604;UBERON:0006598!1.03e-07!604;UBERON:0002532!1.03e-07!604;UBERON:0002050!1.39e-07!605;UBERON:0005423!1.39e-07!605;UBERON:0000922!1.59e-07!612;UBERON:0003102!2.06e-07!95;UBERON:0003100!2.21e-07!41;UBERON:0009569!6.67e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.17e-07;33!UBERON:0004571;1.17e-07;33!UBERON:0006555;3.38e-07;15!UBERON:0004819;3.38e-07;15!UBERON:0001285;3.38e-07;15!UBERON:0007684;3.38e-07;15!UBERON:0003914;3.67e-07;74!UBERON:0001637;4.83e-07;42!UBERON:0003509;4.83e-07;42!UBERON:0004572;4.83e-07;42 | |||
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| ||
|short_description=p2@TNFRSF12A | |short_description=p2@TNFRSF12A | ||
}} | }} |
Latest revision as of 09:00, 16 September 2015
Short description: | p2@TNFRSF12A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNFRSF12A_5end |
Coexpression cluster: | C1761_Placental_Alveolar_Smooth_Fibroblast_mesothelioma_Renal_Urothelial |
Association with transcript: | 23bp_to_ENST00000326577, NM_016639, uc002csv.3, uc002csw.3_5end |
EntrezGene: | TNFRSF12A |
HGNC: | 18152 |
UniProt: | Q9NP84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.32e-32 | 250 |
epithelial cell | 1.15e-25 | 253 |
mesodermal cell | 6.45e-19 | 121 |
muscle precursor cell | 2.27e-14 | 58 |
myoblast | 2.27e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.27e-14 | 58 |
muscle cell | 2.47e-13 | 55 |
electrically responsive cell | 3.51e-13 | 61 |
electrically active cell | 3.51e-13 | 61 |
smooth muscle cell | 3.79e-13 | 43 |
smooth muscle myoblast | 3.79e-13 | 43 |
fibroblast | 2.36e-12 | 76 |
vascular associated smooth muscle cell | 9.71e-12 | 32 |
kidney cell | 1.38e-07 | 17 |
kidney epithelial cell | 1.38e-07 | 17 |
squamous epithelial cell | 2.30e-07 | 63 |
epithelial cell of nephron | 3.34e-07 | 15 |
ectodermal cell | 4.01e-07 | 72 |
mesothelial cell | 5.39e-07 | 19 |
endo-epithelial cell | 6.86e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 5.24e-07 | 29 |
female reproductive organ cancer | 6.09e-07 | 27 |
ovarian cancer | 8.03e-07 | 14 |