FFCP PHASE1:Hg19::chr3:158450428..158450431,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5918 | |EntrezGene=5918 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9867 | |HGNC=9867 | ||
|TSSclassifier=strong | |||
|UniProt=P49788 | |UniProt=P49788 | ||
|association_with_transcript=53bp_to_ENST00000237696_5end | |association_with_transcript=53bp_to_ENST00000237696_5end | ||
|cluster_id=chr3:158450428..158450431,- | |||
|coexpression_cluster_id=C463 | |coexpression_cluster_id=C463 | ||
|description=CAGE_peak_9_at_RARRES1_5end | |description=CAGE_peak_9_at_RARRES1_5end | ||
|id=chr3:158450428..158450431,- | |id=chr3:158450428..158450431,- | ||
|ontology_enrichment_celltype=CL:1000487!4.64e-12!2;CL:0000077!1.09e-10!19;CL:0000511!2.09e-07!1;CL:0002625!2.09e-07!1;CL:0000216!2.09e-07!1;CL:0002568!8.49e-07!1;CL:0000213!9.40e-07!57;CL:0000215!9.40e-07!57 | |ontology_enrichment_celltype=CL:1000487!4.64e-12!2;CL:0000077!1.09e-10!19;CL:0000511!2.09e-07!1;CL:0002625!2.09e-07!1;CL:0000216!2.09e-07!1;CL:0002568!8.49e-07!1;CL:0000213!9.40e-07!57;CL:0000215!9.40e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.55e-98;1!CL:0002625;1.55e-98;1!CL:0000216;1.55e-98;1!CL:0000077;5.37e-22;19!CL:0000154;8.34e-18;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,9.37e-99,1;CL:0002625,9.37e-99,1;CL:0000216,9.37e-99,1;CL:0000077,5.37e-22,19;CL:0000154,7.67e-18,6;CL:0000213,4.33e-08,58;CL:0000215,4.33e-08,58;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3112!6.02e-07!1 | |ontology_enrichment_disease=DOID:3112!6.02e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004122!3.87e-09!15;UBERON:0003064!1.25e-08!37;UBERON:0001136!2.09e-07!1;UBERON:0001343!2.09e-07!1;UBERON:0004910!2.09e-07!1;UBERON:0005154!2.09e-07!1;UBERON:0005295!2.09e-07!1;UBERON:0004813!2.09e-07!1;UBERON:0005297!2.09e-07!1;UBERON:0005294!2.09e-07!1;UBERON:0010141!2.09e-07!1;UBERON:0005891!2.09e-07!1;UBERON:0001301!5.69e-07!1;UBERON:0005904!9.26e-07!4 | |ontology_enrichment_uberon=UBERON:0004122!3.87e-09!15;UBERON:0003064!1.25e-08!37;UBERON:0001136!2.09e-07!1;UBERON:0001343!2.09e-07!1;UBERON:0004910!2.09e-07!1;UBERON:0005154!2.09e-07!1;UBERON:0005295!2.09e-07!1;UBERON:0004813!2.09e-07!1;UBERON:0005297!2.09e-07!1;UBERON:0005294!2.09e-07!1;UBERON:0010141!2.09e-07!1;UBERON:0005891!2.09e-07!1;UBERON:0001301!5.69e-07!1;UBERON:0005904!9.26e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.55e-98;1!UBERON:0001343;1.55e-98;1!UBERON:0004910;1.55e-98;1!UBERON:0004813;1.55e-98;1!UBERON:0004909;3.52e-50;2!UBERON:0005904;6.30e-26;4!UBERON:0000473;1.00e-13;8!UBERON:0000058;2.87e-11;10!UBERON:0003135;2.27e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,9.37e-99,1;UBERON:0001343,9.37e-99,1;UBERON:0004910,9.37e-99,1;UBERON:0005154,9.37e-99,1;UBERON:0005295,9.37e-99,1;UBERON:0004813,9.37e-99,1;UBERON:0005297,9.37e-99,1;UBERON:0005294,9.37e-99,1;UBERON:0010141,9.37e-99,1;UBERON:0005891,9.37e-99,1;UBERON:0004909,2.74e-50,2;UBERON:0005904,5.56e-26,4;UBERON:0000473,9.39e-14,8;UBERON:0004871,9.39e-14,8;UBERON:0003135,2.16e-10,11;UBERON:0004876,2.16e-10,11;UBERON:0004122,5.55e-08,15 | |||
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|short_description=p9@RARRES1 | |short_description=p9@RARRES1 | ||
}} | }} |
Latest revision as of 09:04, 16 September 2015
Short description: | p9@RARRES1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RARRES1_5end |
Coexpression cluster: | C463_Mesothelial_mesothelioma_Sertoli_mesenchymal_vagina_Cardiac_Fibroblast |
Association with transcript: | 53bp_to_ENST00000237696_5end |
EntrezGene: | RARRES1 |
HGNC: | 9867 |
UniProt: | P49788 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 9.37e-99 | 1 |
seminiferous tubule epithelial cell | 9.37e-99 | 1 |
Sertoli cell | 9.37e-99 | 1 |
mesothelial cell | 5.37e-22 | 19 |
protein secreting cell | 7.67e-18 | 6 |
lining cell | 4.33e-08 | 58 |
barrier cell | 4.33e-08 | 58 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 9.37e-99 | 1 |
seminiferous tubule of testis | 9.37e-99 | 1 |
epithelium of male gonad | 9.37e-99 | 1 |
epithelial cord | 9.37e-99 | 1 |
sex cord | 9.37e-99 | 1 |
seminiferous tubule epithelium | 9.37e-99 | 1 |
testis sex cord | 9.37e-99 | 1 |
genital ridge | 9.37e-99 | 1 |
primitive sex cord of indifferent gonad | 9.37e-99 | 1 |
coelomic epithelium | 9.37e-99 | 1 |
epithelium of gonad | 2.74e-50 | 2 |
duct of male reproductive system | 5.56e-26 | 4 |
testis | 9.39e-14 | 8 |
somatic layer of lateral plate mesoderm | 9.39e-14 | 8 |
male reproductive organ | 2.16e-10 | 11 |
urogenital ridge | 2.16e-10 | 11 |
genitourinary system | 5.55e-08 | 15 |