FFCP PHASE1:Hg19::chr10:112404196..112404221,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=282996 | |EntrezGene=282996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27424 | |HGNC=27424 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T481,F5GXH8 | |UniProt=Q5T481,F5GXH8 | ||
|association_with_transcript=41bp_to_ENST00000369519,ENST00000539821,NM_001134363,uc001kzf.2_5end | |association_with_transcript=41bp_to_ENST00000369519,ENST00000539821,NM_001134363,uc001kzf.2_5end | ||
|cluster_id=chr10:112404196..112404221,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_1_at_RBM20_5end | |description=CAGE_peak_1_at_RBM20_5end | ||
|id=chr10:112404196..112404221,+ | |id=chr10:112404196..112404221,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.33e-09;4!UBERON:0007284;5.33e-09;4!UBERON:0003104;2.76e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050615;1.29e-09;16!DOID:114;1.28e-08;2!DOID:5409;1.80e-08;4!DOID:1325;5.33e-08;7!DOID:3904;5.33e-08;7!DOID:1324;1.38e-07;15!DOID:3095;7.57e-07;22!DOID:2994;7.57e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,1.14e-09,16;DOID:114,1.28e-08,2;DOID:5409,2.05e-08,4;DOID:1325,5.39e-08,7;DOID:3904,5.39e-08,7;DOID:1324,1.24e-07,15;DOID:3095,7.36e-07,22;DOID:2994,7.36e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-17!115;UBERON:0000073!1.58e-07!94;UBERON:0001016!1.58e-07!94;UBERON:0000955!4.09e-07!69;UBERON:0006238!4.09e-07!69;UBERON:0007100!7.99e-07!27;UBERON:0002346!8.44e-07!90;UBERON:0003075!8.47e-07!86;UBERON:0007284!8.47e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.91e-17!115;UBERON:0000073!1.58e-07!94;UBERON:0001016!1.58e-07!94;UBERON:0000955!4.09e-07!69;UBERON:0006238!4.09e-07!69;UBERON:0007100!7.99e-07!27;UBERON:0002346!8.44e-07!90;UBERON:0003075!8.47e-07!86;UBERON:0007284!8.47e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.42e-15;25!UBERON:0003978;7.07e-12;3!UBERON:0000946;7.07e-12;3!UBERON:0004151;9.07e-12;3!UBERON:0000948;2.26e-09;22!UBERON:0002081;2.19e-08;2!UBERON:0002133;2.36e-08;2!UBERON:0005090;1.13e-07;2!UBERON:0001630;1.13e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.13e-14,27;UBERON:0003978,6.84e-12,3;UBERON:0009751,6.84e-12,3;UBERON:0000946,6.84e-12,3;UBERON:0002523,6.84e-12,3;UBERON:0005983,6.84e-12,3;UBERON:0002165,6.84e-12,3;UBERON:0002062,6.84e-12,3;UBERON:0007280,6.84e-12,3;UBERON:0004151,8.78e-12,3;UBERON:0003103,1.98e-09,68;UBERON:0000948,1.81e-08,24;UBERON:0005498,1.81e-08,24;UBERON:0004140,1.81e-08,24;UBERON:0009881,1.81e-08,24;UBERON:0004141,1.81e-08,24;UBERON:0003084,1.81e-08,24;UBERON:0007005,1.81e-08,24;UBERON:0004139,1.81e-08,24;UBERON:0004291,1.81e-08,24;UBERON:0002081,2.12e-08,2;UBERON:0010227,2.12e-08,2;UBERON:0002133,2.28e-08,2;UBERON:0005090,7.78e-08,2;UBERON:0001630,7.78e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,1.43117993565528,0.958120975510189,1.75759695432724,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.472674085820339,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36406560085384,0,0.49333509683432,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,1.71571711905428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,3.47963966309705,2.47528499761764,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,1.92283328029452,0,0,2.60124445176006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,1.70481688083848,0,0.296964680832639,0,0,0,0,0,0,4.38345574152353,0.276283915531148,0.251932747854276,1.02268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,1.72371686620732,2.04123229368278,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902382642468723,1.56850027454192,1.34257269580674,0.948768663620925,0,0,0,0,2.59666367690509,0,0.176915129006678,0,0.296521128680622,0,0,0.067401132980677,4.01288823649394,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0.300646838828985,1.55532287095871,0,0.330991955875499,0,0,0,0,0,0,0,3.14508002835654,0,0,0,0,0.0969890164884194,1.5003541537555,0.451961481561065,0,0,0,0,0,0,0,0,9.27746428943917,0,0,0.372757606696298,0,0,0,0.509991088181609,0,0.600420288709789,0,0,0,0,24.8561337132306,53.8526996427457,5.74298419661451,22.364048055887,43.3518308617937,21.6476313718616,95.1317970412044,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,1.04909176269996,0,0.35857467866569,0,29.302508381308,20.5248510813284,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,1.88195521672762,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,16.6477342025248,0,0,0,0,0,0.248385611765534,22.5508274946056,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,1.0362910251936,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49906538123077,0.157265941855896,22.1695565529788,0,0,1.85903646388503,0,0,0,5.60399523799829,0,0.6124909547064,0.128458450192919,0,0.159633859057151,0.41023272848151,0,0,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,0.255524855279191,1.07140367175657,0,0,0,0,0,0,0.135939465953663,0.263091094251396,0,0,0.078493092850514,0,0,0,0,0,1.1436247068265,0.316027223465453,2.32482850736251,0.521574816907738,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,1.94228651156368,6.57041963879981,0,1.45713297917742,0,0.795803100645473,0.118920090777569,10.1651473835064,1.31928620094515,12.6808788596006,0.0771741581079447,0,12.6985670017611,0,1.17838273550813,0,0,0,0,0,0,0.499705779624645,0,0,0,0,0.458729283404541,0,6.94194873650012,0.271965960763659,0,0,0,0,0,0.756998549010474,0.327796715891087,26.3532882103789,0.61193297845189,3.74104367371785,7.99485625953151,0,0.0757786982182394,0,0,0.103432995861895,1.0661699095049,0.714193294391221,0,0,0,0.0636471582781649,0,0.653150243690884,0,0,0,1.33064142618405,0,0,0,0.0898252021065869,7.03922827210363,0,0,0.665756774185513,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,1.43117993565528,0.958120975510189,1.75759695432724,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.472674085820339,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36406560085384,0,0.49333509683432,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,1.71571711905428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,3.47963966309705,2.47528499761764,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,1.92283328029452,0,0,2.60124445176006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,1.70481688083848,0,0.296964680832639,0,0,0,0,0,0,4.38345574152353,0.276283915531148,0.251932747854276,1.02268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,1.72371686620732,2.04123229368278,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902382642468723,1.56850027454192,1.34257269580674,0.948768663620925,0,0,0,0,2.59666367690509,0,0.176915129006678,0,0.296521128680622,0,0,0.067401132980677,4.01288823649394,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0.300646838828985,1.55532287095871,0,0.330991955875499,0,0,0,0,0,0,0,3.14508002835654,0,0,0,0,0.0969890164884194,1.5003541537555,0.451961481561065,0,0,0,0,0,0,0,0,9.27746428943917,0,0,0.372757606696298,0,0,0,0.509991088181609,0,0.600420288709789,0,0,0,0,24.8561337132306,53.8526996427457,5.74298419661451,22.364048055887,43.3518308617937,21.6476313718616,95.1317970412044,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,1.04909176269996,0,0.35857467866569,0,29.302508381308,20.5248510813284,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,1.88195521672762,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,16.6477342025248,0,0,0,0,0,0.248385611765534,22.5508274946056,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,1.0362910251936,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.49906538123077,0.157265941855896,22.1695565529788,0,0,1.85903646388503,0,0,0,5.60399523799829,0,0.6124909547064,0.128458450192919,0,0.159633859057151,0.41023272848151,0,0,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,0.255524855279191,1.07140367175657,0,0,0,0,0,0,0.135939465953663,0.263091094251396,0,0,0.078493092850514,0,0,0,0,0,1.1436247068265,0.316027223465453,2.32482850736251,0.521574816907738,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,1.94228651156368,6.57041963879981,0,1.45713297917742,0,0.795803100645473,0.118920090777569,10.1651473835064,1.31928620094515,12.6808788596006,0.0771741581079447,0,12.6985670017611,0,1.17838273550813,0,0,0,0,0,0,0.499705779624645,0,0,0,0,0.458729283404541,0,6.94194873650012,0.271965960763659,0,0,0,0,0,0.756998549010474,0.327796715891087,26.3532882103789,0.61193297845189,3.74104367371785,7.99485625953151,0,0.0757786982182394,0,0,0.103432995861895,1.0661699095049,0.714193294391221,0,0,0,0.0636471582781649,0,0.653150243690884,0,0,0,1.33064142618405,0,0,0,0.0898252021065869,7.03922827210363,0,0,0.665756774185513,0.603821380773079,0 | ||
|short_description=p1@RBM20 | |short_description=p1@RBM20 | ||
}} | }} |
Latest revision as of 09:05, 16 September 2015
Short description: | p1@RBM20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBM20_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 41bp_to_ENST00000369519, ENST00000539821, NM_001134363, uc001kzf.2_5end |
EntrezGene: | RBM20 |
HGNC: | 27424 |
UniProt: | Q5T481F5GXH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.13e-14 | 27 |
valve | 6.84e-12 | 3 |
cardiac mesenchyme | 6.84e-12 | 3 |
cardial valve | 6.84e-12 | 3 |
tunica intima | 6.84e-12 | 3 |
heart layer | 6.84e-12 | 3 |
endocardium | 6.84e-12 | 3 |
endocardial cushion | 6.84e-12 | 3 |
presumptive endocardium | 6.84e-12 | 3 |
cardiac chamber | 8.78e-12 | 3 |
compound organ | 1.98e-09 | 68 |
heart | 1.81e-08 | 24 |
primitive heart tube | 1.81e-08 | 24 |
primary heart field | 1.81e-08 | 24 |
anterior lateral plate mesoderm | 1.81e-08 | 24 |
heart tube | 1.81e-08 | 24 |
heart primordium | 1.81e-08 | 24 |
cardiac mesoderm | 1.81e-08 | 24 |
cardiogenic plate | 1.81e-08 | 24 |
heart rudiment | 1.81e-08 | 24 |
cardiac atrium | 2.12e-08 | 2 |
future cardiac atrium | 2.12e-08 | 2 |
atrioventricular valve | 2.28e-08 | 2 |
muscle structure | 7.78e-08 | 2 |
muscle organ | 7.78e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 1.14e-09 | 16 |
heart disease | 1.28e-08 | 2 |
lung small cell carcinoma | 2.05e-08 | 4 |
bronchus cancer | 5.39e-08 | 7 |
bronchogenic carcinoma | 5.39e-08 | 7 |
lung cancer | 1.24e-07 | 15 |
germ cell and embryonal cancer | 7.36e-07 | 22 |
germ cell cancer | 7.36e-07 | 22 |