FFCP PHASE1:Hg19::chr3:158450534..158450591,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:158450534..158450591,- to FFCP PHASE1:Hg19::chr3:158450534..158450591,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5918 | |EntrezGene=5918 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9867 | |HGNC=9867 | ||
|TSSclassifier=strong | |||
|UniProt=P49788 | |UniProt=P49788 | ||
|association_with_transcript=-49bp_to_ENST00000237696_5end | |||
|cluster_id=chr3:158450534..158450591,- | |||
|description=CAGE_peak_2_at_RARRES1_5end | |||
|id=chr3:158450534..158450591,- | |||
|ontology_enrichment_celltype=CL:0000187!6.57e-19!54;CL:0000680!1.52e-18!57;CL:0000056!1.52e-18!57;CL:0000355!1.52e-18!57;CL:0000183!8.40e-18!59;CL:0000192!3.12e-16!42;CL:0000514!3.12e-16!42;CL:0000222!2.93e-15!119;CL:0000393!5.86e-15!60;CL:0000211!5.86e-15!60;CL:0000359!6.10e-12!32;CL:0000055!1.83e-09!180;CL:0002494!1.55e-08!16 | |||
|ontology_enrichment_celltype_v019=CL:0000192;8.28e-13;43!CL:0000359;8.04e-12;32!CL:0000187;3.30e-11;55!CL:0000393;8.68e-10;61!CL:0000211;8.68e-10;61!CL:0002494;9.95e-09;16!CL:0000077;1.10e-07;19!CL:0000235;2.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,9.53e-21,55;CL:0000680,4.95e-20,58;CL:0000056,4.95e-20,58;CL:0000355,4.95e-20,58;CL:0000192,1.15e-17,43;CL:0000514,1.15e-17,43;CL:0000393,2.09e-17,61;CL:0000211,2.09e-17,61;CL:0000222,8.18e-17,121;CL:0000359,1.76e-12,32;CL:0002494,7.17e-09,16;CL:0000077,1.14e-07,19;CL:0000235,2.25e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;8.28e-13;43!CL:0000355;1.08e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!8.95e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.15e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.47e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002385!2.61e-19!63;UBERON:0001015!2.61e-19!63;UBERON:0000383!2.61e-19!63;UBERON:0001134!1.42e-18!61;UBERON:0002036!1.42e-18!61;UBERON:0003082!1.42e-18!61;UBERON:0005256!9.48e-17!143;UBERON:0000481!1.48e-14!347;UBERON:0004290!1.84e-14!70;UBERON:0000914!2.60e-13!83;UBERON:0002329!2.60e-13!83;UBERON:0003077!2.60e-13!83;UBERON:0003059!2.60e-13!83;UBERON:0007282!2.60e-13!83;UBERON:0009618!2.60e-13!83;UBERON:0007285!2.60e-13!83;UBERON:0000486!5.68e-13!82;UBERON:0003104!1.94e-12!238;UBERON:0009142!1.94e-12!238;UBERON:0000926!2.88e-12!448;UBERON:0004120!2.88e-12!448;UBERON:0006603!2.88e-12!448;UBERON:0000490!4.58e-12!138;UBERON:0003914!6.12e-12!118;UBERON:0004872!1.16e-11!84;UBERON:0000948!2.38e-11!24;UBERON:0005498!2.38e-11!24;UBERON:0004140!2.38e-11!24;UBERON:0009881!2.38e-11!24;UBERON:0004141!2.38e-11!24;UBERON:0003084!2.38e-11!24;UBERON:0007005!2.38e-11!24;UBERON:0004139!2.38e-11!24;UBERON:0004291!2.38e-11!24;UBERON:0007100!4.16e-11!27;UBERON:0000477!7.79e-10!286;UBERON:0002100!1.80e-09!216;UBERON:0003103!4.41e-09!69;UBERON:0002204!7.50e-09!167;UBERON:0001009!1.78e-08!113;UBERON:0000119!2.50e-08!312;UBERON:0004535!2.84e-08!110;UBERON:0000483!3.77e-08!309;UBERON:0001637!4.88e-08!42;UBERON:0003509!4.88e-08!42;UBERON:0004572!4.88e-08!42;UBERON:0000468!8.01e-08!659;UBERON:0000467!8.38e-08!625;UBERON:0004573!9.01e-08!33;UBERON:0004571!9.01e-08!33;UBERON:0002049!9.83e-08!79;UBERON:0007798!9.83e-08!79;UBERON:0004111!1.07e-07!241;UBERON:0000480!1.13e-07!626;UBERON:0001048!1.62e-07!168;UBERON:0000055!3.67e-07!69;UBERON:0002050!5.09e-07!605;UBERON:0005423!5.09e-07!605;UBERON:0000923!7.40e-07!604;UBERON:0005291!7.40e-07!604;UBERON:0006598!7.40e-07!604;UBERON:0002532!7.40e-07!604;UBERON:0000922!9.17e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;6.10e-10;22!UBERON:0007100;1.70e-09;25!UBERON:0004573;3.45e-09;33!UBERON:0004571;3.45e-09;33!UBERON:0004905;4.28e-07;8!UBERON:0000982;4.28e-07;8!UBERON:0004770;4.28e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,4.57e-19,64;UBERON:0001015,4.57e-19,64;UBERON:0000383,4.57e-19,64;UBERON:0001134,7.48e-19,62;UBERON:0002036,7.48e-19,62;UBERON:0003082,7.48e-19,62;UBERON:0003104,5.50e-18,160;UBERON:0009142,5.50e-18,160;UBERON:0005256,3.51e-17,122;UBERON:0002329,8.88e-15,71;UBERON:0003059,8.88e-15,71;UBERON:0007282,8.88e-15,71;UBERON:0004290,8.88e-15,71;UBERON:0009618,8.88e-15,71;UBERON:0003077,2.15e-14,72;UBERON:0007285,2.15e-14,72;UBERON:0007524,5.06e-14,73;UBERON:0000486,1.28e-13,83;UBERON:0007503,4.35e-13,78;UBERON:0000926,6.90e-12,315;UBERON:0004120,6.90e-12,315;UBERON:0006603,6.90e-12,315;UBERON:0002204,2.12e-11,167;UBERON:0004872,3.68e-11,83;UBERON:0003914,9.88e-11,117;UBERON:0000948,2.90e-10,24;UBERON:0005498,2.90e-10,24;UBERON:0004140,2.90e-10,24;UBERON:0009881,2.90e-10,24;UBERON:0004141,2.90e-10,24;UBERON:0003084,2.90e-10,24;UBERON:0007005,2.90e-10,24;UBERON:0004139,2.90e-10,24;UBERON:0004291,2.90e-10,24;UBERON:0000490,2.91e-10,148;UBERON:0004573,6.97e-10,33;UBERON:0004571,6.97e-10,33;UBERON:0007100,7.85e-10,27;UBERON:0002100,2.20e-09,199;UBERON:0001637,6.33e-09,42;UBERON:0003509,6.33e-09,42;UBERON:0004572,6.33e-09,42;UBERON:0001009,2.72e-08,112;UBERON:0004535,3.28e-08,109;UBERON:0004905,3.11e-07,8;UBERON:0000982,3.11e-07,8;UBERON:0004770,3.11e-07,8;UBERON:0000055,5.49e-07,68;UBERON:0007500,7.44e-07,59;UBERON:0001981,7.44e-07,59;UBERON:0004537,7.44e-07,59;UBERON:0006965,7.44e-07,59 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,1.74467704820074,0,0.631719873426831,0.522371256399677,1.96587149201207,0.697801167972428,0.218441372130172,0,5.19818682432196,8.28493439319789,1.34465029290355,2.41077811209591,1.46062018077475,1.46379839637152,0.369363174230364,1.02000345622126,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0,6.94137970143765,7.77344798445551,6.43938919085466,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,1.29096936716765,0,0,0,0,0,0,0,0,0,0,1.45104619314292,0,0,0.251248665256743,0,0,2.42159801053347,1.84138817993782,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,20.7917266508127,13.0419813080401,0.722878304769133,2.00535164254356,3.0417768981773,1.5905718941022,0.486634870302636,0.850813354476611,0.886917589850256,0.351339142772504,0.458426764241994,0,0,0,0.696518949197069,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.25326102332916,2.51577443545116,7.17091551872034,2.12801029319014,3.92474320099615,2.1349799145941,1.2333377420858,2.48968828319813,1.48181739276657,1.47115712802113,0,0,0.70296429550139,0,0,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0,0.206651562351531,0,1.23633464639278,0.910161361938026,4.31170885089743,0,0,0,0,0.612975591598039,1.35214253015937,0.907457465280168,0,0.427114777637135,0.423863802319124,0,0.92747276314595,0,0.37223371266318,0,0,0,0.0920498986422993,3.39456719319505,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,4.64367928031979,0.721879481669586,0.354920400119532,0,0,0.772057809126758,0.217879444092406,0.237270619111097,0,0.196221465125346,1.15424147083917,0,0,3.2925920906512,4.41026134156626,0,0,0.590789906681404,0,0.245976877086227,4.80389868835872,0,0,0,0,0.325808305310325,0,2.88662684050547,0,5.9878434060269,0.866198686566443,3.24089858803628,6.84914948044554,0,0,3.69325509131096,3.04205544681009,2.82399208348584,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,6.5394010324992,0.07333828582095,4.13669490424889,3.57656445851882,0.845302752556,0.797814349754612,1.04007436911366,0.514414748524284,0,0,4.86125178437702,2.17048642156577,0,0.977208552881205,4.26470338491055,0,20.7993170171114,12.2014684204041,29.1921134251607,10.9461402577071,8.53837055434615,6.32501818449095,0,1.14861935834114,0,0,1.2328579353023,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,9.32455337065463,7.00238729483548,1.89885516589815,1.24782516918484,0,0,0.234282829985426,0,0,0,0,0.921845842708516,1.12948698808508,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0.256278298511402,0,0.64341568457443,0,0.154209693802656,1.06537035187876,0.98552587216571,1.55776328755086,0.813472649219715,0,0.601519410909855,0.276242966807689,14.6962493650697,6.3731908802351,23.7335191076558,0.902399225814824,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0.270946437543853,1.50506932156456,0,0.831076008928724,0.447749509444357,0,0,0.769350375349168,0.984043937099117,3.90454073597164,4.32772248920434,0,0,0,0,20.8889108797407,1.54673149267395,0.616194468458578,1.22802939780904,0,2.0409846524972,1.45016693914229,0.511359764496605,1.15741646340759,0,0,0,0,0.464845549297286,4.7221852024596,2.7881490806424,4.31247012246524,0.532306030317022,0,2.22389062924704,1.00187420719394,0,0.316379424718726,8.57835872657212,0.511795582622668,3.85145089230528,4.77304871888905,2.35484592059769,1.07923474549989,2.19629623788844,1.06031162111118,0.808729926293264,1.58510321173008,2.94880919367287,1.95053495635836,17.3036577638212,5.28250733783777,3.8219975194236,12.8678943077879,11.3008116620243,4.96228809191512,3.3171948762061,1.75380354101505,4.6302042741335,15.0855792970726,1.21746226177622,0.6196469961995,1.12678241012897,1.72093622644862,1.08073945114433,0.7133421029625,0.709522128141196,4.64436797654861,4.93942339439853,0,0.349934720244983,0,0.670302275535787,0,4.70719003883896,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0.593929361665277,0,0,0,1.66963057534359,0,0,1.79323189425963,1.10513566212459,0,0,0,0,0.0898683511473268,4.11748701753901,0,6.31317796076375,0,0,0,0,0,0,0,9.42499448065232,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,2.77020930613669,1.82307289355202,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,3.27292988662355,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,1.97292201424695,0,0,1.39010475182674,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,2.97035336011451,0,0.774050650312681,0.292357268344742,0.492692742319255,1.74580229679155,0,3.84167259326905,0,0,0,0.586654148204409,15.7111287693006,1.28071796843612,2.39771531498556,0,0,0,0,0,0.707082103850386,0,0,1.83596791745379,0,0,0,0,0.429765441419957,0,1.39641200636127,0.4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| ||
|short_description=p2@RARRES1 | |||
}} | }} |
Latest revision as of 09:07, 16 September 2015
Short description: | p2@RARRES1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RARRES1_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000237696_5end |
EntrezGene: | RARRES1 |
HGNC: | 9867 |
UniProt: | P49788 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 9.53e-21 | 55 |
muscle precursor cell | 4.95e-20 | 58 |
myoblast | 4.95e-20 | 58 |
multi-potent skeletal muscle stem cell | 4.95e-20 | 58 |
smooth muscle cell | 1.15e-17 | 43 |
smooth muscle myoblast | 1.15e-17 | 43 |
electrically responsive cell | 2.09e-17 | 61 |
electrically active cell | 2.09e-17 | 61 |
mesodermal cell | 8.18e-17 | 121 |
vascular associated smooth muscle cell | 1.76e-12 | 32 |
cardiocyte | 7.17e-09 | 16 |
mesothelial cell | 1.14e-07 | 19 |
macrophage | 2.25e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.47e-09 | 14 |