FFCP PHASE1:Hg19::chr19:16435705..16435726,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:16435705..16435726,+ to FFCP PHASE1:Hg19::chr19:16435705..16435726,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10365 | |EntrezGene=10365 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6347 | |HGNC=6347 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5W3,Q8IUN4 | |UniProt=Q9Y5W3,Q8IUN4 | ||
|association_with_transcript=54bp_to_ENST00000248071,NM_016270,uc002ndw.2_5end | |||
|cluster_id=chr19:16435705..16435726,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_3_at_KLF2_5end | |||
|id=chr19:16435705..16435726,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.69e-10!140;CL:0000791!3.61e-09!18;CL:0000789!3.61e-09!18;CL:0002420!3.61e-09!18;CL:0002419!3.61e-09!18;CL:0000790!3.61e-09!18;CL:0002087!3.38e-08!119;CL:0002031!1.06e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.29e-13;18!CL:0000789;9.29e-13;18!CL:0002419;9.29e-13;18!CL:0000094;2.46e-09;8!CL:0000084;2.79e-09;25!CL:0000624;5.42e-09;6!CL:0000625;5.30e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.23e-16,136;CL:0000791,7.95e-13,18;CL:0000789,7.95e-13,18;CL:0002420,7.95e-13,18;CL:0002419,7.95e-13,18;CL:0000790,7.95e-13,18;CL:0002087,8.21e-12,115;CL:0002031,5.44e-11,120;CL:0000037,2.51e-10,168;CL:0000094,1.71e-09,8;CL:0002032,2.31e-09,161;CL:0000837,2.31e-09,161;CL:0000838,2.60e-09,52;CL:0000084,3.24e-09,25;CL:0000827,3.24e-09,25;CL:0000624,3.99e-09,6;CL:0000988,4.45e-09,177;CL:0000542,5.22e-09,53;CL:0000051,5.22e-09,53;CL:0002393,1.12e-08,9;CL:0002397,1.12e-08,9;CL:0000766,5.00e-08,72;CL:0000625,5.60e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;9.29e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.16e-07!216;UBERON:0007023!5.04e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.34e-07,114 | |||
|phase1_expression=0.181678379270557,0.214100523890983,1.40954404095971,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0.408001382488506,0.626909442956176,0,0,0,0,0,0,5.90046415273356,1.53531759238885,3.56077083626975,0,0,0,0,0,0,0.553995408531877,2.4065333696417,2.60413044859022,1.79132379391939,2.26725566213286,2.06060454107349,0.436194716338694,0.377875943688809,0.727752183563449,0.464858073811369,0,0,0.28769239232215,0.256160706529101,0.236482229888585,1.37898272294647,0.645484683583826,1.35426486594342,0.564727018627814,0,0.224723484445085,1.22433556948361,0.641858054152187,0,0.329851300186716,0.398927315243264,1.27867425159808,0.870627715885752,0.56738522469114,0,0,0,0.65156653411535,0,0.368277635987565,0,1.26753171787165,1.70083439972035,1.46761051855863,1.34794357375794,0.450530678524519,1.12507910687956,2.85012743741249,2.58591680358817,2.37463399894024,0,1.09227722252426,0.889509253863555,1.70692089026603,1.60158394814405,0.574752439954483,0.661044872784862,0.954053754535364,4.55370375287559,5.87237189370939,2.6759125968766,0,0.560508562981536,0.263384084775077,2.9506465517075,3.53709686474248,4.72883447698871,2.17342444007882,2.28145586643513,0.946895611469467,1.94826728407911,2.1167986808183,3.24066498222321,2.21533894583621,3.5204502289452,4.86747014957566,3.25148368899696,2.13769275984779,0.276350017785848,0.869409257205157,3.85545064221357,2.40786745280742,2.09071047609954,1.92625882585863,2.68254345521345,1.03088233644789,2.78321661221453,1.91139248594458,0.651083453856419,0.950452044448374,1.35517607169996,1.02389288923535,0,1.4206635122641,3.28451198768419,3.42731463482045,5.34880391567015,5.35850294366356,0,0.670700859703636,0.12786256184353,0,1.00267582127178,1.15877215168659,0,0.486634870302636,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0.79504962946682,0,0.694281003215189,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0,0,0.402829317109147,0.760272105718513,1.46437234528902,0,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0.949265659568129,0,7.9068250461638,3.87780264148325,0,1.49091585508596,2.65924074495618,0.132409180813219,0.286836620748814,1.41867352879343,0,1.06748995729705,2.71334303258876,0.933633106199299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0,0,0,0.277064115484183,0.877955241761676,0.30648779579902,0.300476117813194,0,0,0,0,0,0.103052529238439,0,0.930584281657949,0.337552664482532,0.194874010322397,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,2.94017422771084,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0,0.761016608938393,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,31.3065454466566,14.7002352485301,33.7067297248434,0,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0.112085143993527,5.31983052545203,4.31255149719035,4.87703537863044,0,0,0,0,0,8.23907726341901,0,7.45947924184864,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0,1.50473049863859,0,2.0694614258501,0,0.184369168541703,0.521301686808497,0,0.343143423810856,2.68798433959754,3.45142721309787,4.05564719653088,0,0,0,1.48864684691266,0.306923946576125,1.12264037773229,1.66580894032411,1.02341449813341,3.05622450172854,0,0,0.355123450626254,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0.0920809889358963,0.574072240823034,0.546273504020151,0.262248829918848,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,2.16386124460217,0,0,0,0,1.6068392984416,0.580024309752732,0,0,0,0,0,0,0.890320356467374,0,0.192190067365106,0,0.10115778085555,0.929691098594572,0.31481234683064,0,1.23213432070436,0,0,1.11194531462352,0,0,0,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0,0,1.01091240786658,1.58510321173008,0,0,1.46228093778771,2.11300293513511,0.409499734223957,0.989838023675989,1.13008116620243,0,0.66343897524122,1.75380354101505,0.578775534266688,1.31178950409327,0.811641507850816,0.92947049429925,0.281695602532241,0,0.0982490410131212,0.7133421029625,0,5.06658324714394,1.64647446479951,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0.764637207142375,1.13929437434833,0.714695326373367,1.23408681925858,1.94541993357815,0,3.17250070517708,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,1.90460633053462,0,1.00299045849731,0.284136146806413,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0.111308705022906,0,0,0.996239941255349,2.48655523978033,0,0,0,0.311039587661807,0.179736702294654,0,0,3.64980600856654,2.3948309234694,0,0.969332746095218,0.463840490809256,0,0,0.437299999980979,6.52499617891314,0,0.254253650292766,0,0,0,0.173624994933292,0.885741385813839,0,0,0.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| 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| ||
|short_description=p3@KLF2 | |||
}} | }} |
Latest revision as of 09:38, 16 September 2015
Short description: | p3@KLF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLF2_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 54bp_to_ENST00000248071, NM_016270, uc002ndw.2_5end |
EntrezGene: | KLF2 |
HGNC: | 6347 |
UniProt: | Q9Y5W3Q8IUN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.23e-16 | 136 |
mature alpha-beta T cell | 7.95e-13 | 18 |
alpha-beta T cell | 7.95e-13 | 18 |
immature T cell | 7.95e-13 | 18 |
mature T cell | 7.95e-13 | 18 |
immature alpha-beta T cell | 7.95e-13 | 18 |
nongranular leukocyte | 8.21e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 5.44e-11 | 120 |
hematopoietic stem cell | 2.51e-10 | 168 |
granulocyte | 1.71e-09 | 8 |
hematopoietic oligopotent progenitor cell | 2.31e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.31e-09 | 161 |
lymphoid lineage restricted progenitor cell | 2.60e-09 | 52 |
T cell | 3.24e-09 | 25 |
pro-T cell | 3.24e-09 | 25 |
CD4-positive, alpha-beta T cell | 3.99e-09 | 6 |
hematopoietic cell | 4.45e-09 | 177 |
lymphocyte | 5.22e-09 | 53 |
common lymphoid progenitor | 5.22e-09 | 53 |
intermediate monocyte | 1.12e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.12e-08 | 9 |
myeloid leukocyte | 5.00e-08 | 72 |
CD8-positive, alpha-beta T cell | 5.60e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.34e-07 | 114 |