FFCP PHASE1:Hg19::chr6:157098775..157098820,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:157098775..157098820,+
|short_description=p1@ARID1B
|description=CAGE_peak_1_at_ARID1B_5end
|association_with_transcript=-242bp_to_ENST00000346085,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57492 | |EntrezGene=57492 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18040 | |HGNC=18040 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFD5 | |UniProt=Q8NFD5 | ||
|association_with_transcript=-242bp_to_ENST00000346085,ENST00000350026_5end | |||
|cluster_id=chr6:157098775..157098820,+ | |||
|description=CAGE_peak_1_at_ARID1B_5end | |||
|id=chr6:157098775..157098820,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.30e-22!115;UBERON:0002346!6.94e-16!90;UBERON:0001049!2.69e-15!57;UBERON:0005068!2.69e-15!57;UBERON:0006241!2.69e-15!57;UBERON:0007135!2.69e-15!57;UBERON:0003075!3.04e-15!86;UBERON:0007284!3.04e-15!86;UBERON:0000955!8.36e-13!69;UBERON:0006238!8.36e-13!69;UBERON:0002616!1.03e-12!59;UBERON:0003080!1.73e-11!42;UBERON:0002780!2.53e-11!41;UBERON:0001890!2.53e-11!41;UBERON:0006240!2.53e-11!41;UBERON:0000153!7.65e-11!129;UBERON:0007811!7.65e-11!129;UBERON:0000073!7.80e-11!94;UBERON:0001016!7.80e-11!94;UBERON:0003056!1.26e-10!61;UBERON:0000033!1.94e-10!123;UBERON:0005743!2.13e-10!86;UBERON:0001017!3.52e-10!82;UBERON:0000924!2.76e-09!173;UBERON:0006601!2.76e-09!173;UBERON:0002020!4.73e-09!34;UBERON:0003528!4.73e-09!34;UBERON:0001893!6.44e-09!34;UBERON:0004121!9.46e-09!169;UBERON:0002791!1.25e-08!33;UBERON:0001869!6.56e-08!32;UBERON:0004111!4.58e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.30e-08;41!UBERON:0001890;1.30e-08;41!UBERON:0000073;2.45e-08;53!UBERON:0002616;2.45e-08;53!UBERON:0001893;8.63e-08;34!UBERON:0003528;9.73e-08;34!UBERON:0002020;9.73e-08;34!UBERON:0002791;2.07e-07;32!UBERON:0001869;3.43e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.39e-22,114;UBERON:0002346,1.99e-15,86;UBERON:0001049,3.99e-15,56;UBERON:0005068,3.99e-15,56;UBERON:0006241,3.99e-15,56;UBERON:0007135,3.99e-15,56;UBERON:0003075,8.63e-15,82;UBERON:0007284,8.63e-15,82;UBERON:0000073,9.57e-14,53;UBERON:0002616,9.57e-14,53;UBERON:0000955,1.26e-12,68;UBERON:0006238,1.26e-12,68;UBERON:0002780,2.53e-11,41;UBERON:0001890,2.53e-11,41;UBERON:0003080,2.53e-11,41;UBERON:0006240,2.53e-11,41;UBERON:0003056,8.14e-11,61;UBERON:0010314,9.51e-11,132;UBERON:0001016,1.96e-10,89;UBERON:0001017,5.20e-10,81;UBERON:0010371,1.13e-09,104;UBERON:0003528,4.73e-09,34;UBERON:0002020,4.73e-09,34;UBERON:0001893,6.44e-09,34;UBERON:0004121,2.09e-08,171;UBERON:0000924,2.09e-08,171;UBERON:0006601,2.09e-08,171;UBERON:0002791,4.29e-08,32;UBERON:0001869,6.56e-08,32;UBERON:0004111,7.46e-07,240 | |||
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| ||
|short_description=p1@ARID1B | |||
}} | }} |
Latest revision as of 09:46, 16 September 2015
Short description: | p1@ARID1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARID1B_5end |
Coexpression cluster: | NA |
Association with transcript: | -242bp_to_ENST00000346085, ENST00000350026_5end |
EntrezGene: | ARID1B |
HGNC: | 18040 |
UniProt: | Q8NFD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.39e-22 | 114 |
neurectoderm | 1.99e-15 | 86 |
neural tube | 3.99e-15 | 56 |
neural rod | 3.99e-15 | 56 |
future spinal cord | 3.99e-15 | 56 |
neural keel | 3.99e-15 | 56 |
neural plate | 8.63e-15 | 82 |
presumptive neural plate | 8.63e-15 | 82 |
regional part of nervous system | 9.57e-14 | 53 |
regional part of brain | 9.57e-14 | 53 |
brain | 1.26e-12 | 68 |
future brain | 1.26e-12 | 68 |
regional part of forebrain | 2.53e-11 | 41 |
forebrain | 2.53e-11 | 41 |
anterior neural tube | 2.53e-11 | 41 |
future forebrain | 2.53e-11 | 41 |
pre-chordal neural plate | 8.14e-11 | 61 |
structure with developmental contribution from neural crest | 9.51e-11 | 132 |
nervous system | 1.96e-10 | 89 |
central nervous system | 5.20e-10 | 81 |
ecto-epithelium | 1.13e-09 | 104 |
brain grey matter | 4.73e-09 | 34 |
gray matter | 4.73e-09 | 34 |
telencephalon | 6.44e-09 | 34 |
ectoderm-derived structure | 2.09e-08 | 171 |
ectoderm | 2.09e-08 | 171 |
presumptive ectoderm | 2.09e-08 | 171 |
regional part of telencephalon | 4.29e-08 | 32 |
cerebral hemisphere | 6.56e-08 | 32 |
anatomical conduit | 7.46e-07 | 240 |