FFCP PHASE1:Hg19::chr1:11751748..11751798,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374946 | |EntrezGene=374946 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25054 | |HGNC=25054 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBI3 | |UniProt=Q8NBI3 | ||
|association_with_transcript=0bp_to_ENST00000294485,NM_198545,uc001asr.1_5end | |association_with_transcript=0bp_to_ENST00000294485,NM_198545,uc001asr.1_5end | ||
|cluster_id=chr1:11751748..11751798,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_C1orf187_5end | |description=CAGE_peak_1_at_C1orf187_5end | ||
|id=chr1:11751748..11751798,+ | |id=chr1:11751748..11751798,+ | ||
|ontology_enrichment_celltype=CL:0002319!2.67e-10!25;CL:0000047!1.53e-07!8;CL:0002139!4.67e-07!24 | |ontology_enrichment_celltype=CL:0002319!2.67e-10!25;CL:0000047!1.53e-07!8;CL:0002139!4.67e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.39e-15;25!CL:0000540;4.32e-09;6!CL:0000404;4.32e-09;6!CL:0002322;1.03e-07;5!CL:0000095;2.90e-07;17!CL:0000128;3.42e-07;7!CL:0000126;3.42e-07;7!CL:0000127;3.42e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.07e-15,25;CL:0000047,1.04e-11,8;CL:0000133,1.65e-10,59;CL:0000540,4.32e-09,6;CL:0000031,4.32e-09,6;CL:0000404,4.32e-09,6;CL:0002322,1.06e-07,5;CL:0000095,2.37e-07,17;CL:0000123,2.37e-07,17;CL:0000128,3.51e-07,7;CL:0000126,3.51e-07,7;CL:0000127,3.51e-07,7;CL:0002453,3.51e-07,7;CL:0000221,3.57e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;4.32e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.71e-19!82;UBERON:0005743!1.92e-17!86;UBERON:0000073!1.69e-15!94;UBERON:0001016!1.69e-15!94;UBERON:0000955!1.11e-12!69;UBERON:0006238!1.11e-12!69;UBERON:0002346!1.55e-12!90;UBERON:0003075!4.02e-12!86;UBERON:0007284!4.02e-12!86;UBERON:0001049!1.09e-11!57;UBERON:0005068!1.09e-11!57;UBERON:0006241!1.09e-11!57;UBERON:0007135!1.09e-11!57;UBERON:0002616!1.04e-10!59;UBERON:0000924!2.30e-09!173;UBERON:0006601!2.30e-09!173;UBERON:0004121!5.84e-09!169;UBERON:0000033!1.28e-08!123;UBERON:0003056!1.80e-08!61;UBERON:0003080!5.93e-08!42;UBERON:0002780!9.63e-08!41;UBERON:0001890!9.63e-08!41;UBERON:0006240!9.63e-08!41;UBERON:0002049!1.05e-07!79;UBERON:0007798!1.05e-07!79;UBERON:0000153!1.10e-07!129;UBERON:0007811!1.10e-07!129;UBERON:0001893!1.34e-07!34;UBERON:0002791!1.58e-07!33;UBERON:0000956!2.30e-07!25;UBERON:0000203!2.30e-07!25;UBERON:0002020!2.36e-07!34;UBERON:0003528!2.36e-07!34;UBERON:0000025!3.60e-07!194;UBERON:0001869!6.75e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;3.63e-07;11!UBERON:0000488;9.72e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.46e-12,81;UBERON:0001016,3.13e-10,89;UBERON:0002346,8.77e-08,86;UBERON:0002049,2.08e-07,78;UBERON:0007798,2.08e-07,78;UBERON:0003075,2.94e-07,82;UBERON:0007284,2.94e-07,82;UBERON:0004121,3.74e-07,171;UBERON:0000924,3.74e-07,171;UBERON:0006601,3.74e-07,171;UBERON:0007625,4.41e-07,11;UBERON:0000488,9.81e-07,4 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0,0,2.01697543935533,4.21886169616784,1.46062018077475,3.41552959153355,60.3293184576261,51.2041735023075,27.2705607685936,5.15224776835902,18.2042985346936,6.40267461933494,0.0764134057479513,0.0821005894499457,0.157421562627358,2.75354993794233,1.53531759238885,0.619264493264304,0,0.30120591877825,0,0,0,0,0,1.20326668482085,4.55722828503289,0,0,0,0.145398238779565,2.64513160582167,0.242584061187816,0,4.11167888021826,1.54853185447552,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.376484679085209,9.5517152520246,0.449446968890169,0.612167784741805,2.56743221660875,0,0,0.797854630486527,0,0,1.70215567407342,0,0,4.69334626578181,0.217188844705117,0,1.10483290796269,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36305137788922,0,0,0,0,0.501559486172034,0,0,0,0.222820913770347,0,0,0,1.28091319725675,0.390178042679635,3.94650971048823,1.38175008892924,0.579606171470105,0,0,0,1.92625882585863,0,0,0,0.318565414324097,0,0,1.50575119077773,1.53583933385302,0,0.473554504088034,0.821127996921047,0.403213486449465,1.87208137048455,2.75166367377318,0,0.670700859703636,0,0,0,0.144846518960824,21.4727205703797,7.78615792484217,36.0177653395099,44.3458794925128,31.1813489210597,0.196468613246569,0,0,0.324547393654683,0.174129737299267,1.59549552622638,0,0,0,0.198762407366705,0,0.694281003215189,3.39184765154406,2.51699661725944,2.47606237746061,0.417989933073621,0.516833518338658,0.35576626268671,1.33888245105868,5.23678112241891,0,1.22031028774085,0.367663080345869,1.62028389576352,0.625098097988558,0.673588117878509,0.225222960966644,4.5994991239765,2.84779697870439,4.76324534219059,0,0,0.436094052142534,0,3.29239330327907,0.662045904066094,9.46560848471085,5.67469411517371,3.36406560085384,0,2.96001058100592,0,0,0.163461903113459,5.44886739521753,2.30470369792,0.70296429550139,0,0.570471821544449,0,0.352303495931295,0.161872944368132,0.280901613404497,0,0.368502951935304,0,0,0,0,0,0,0.375355559615893,0,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0.37223371266318,0.843881661206331,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,33.5427691856387,26.5059536642971,24.1683401168598,30.0617059544574,32.2970689120804,16.7889585174882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,0,0,0,0,0,1.32438929824395,0,85.7839051492628,0,0,0,0,0,0,34.6395220860656,27.127714764168,4.3441216867254,3.3204282985047,9.72269576410883,8.18092854608773,0,0,0.738651018262192,5.6161023633417,4.16167254408439,0,0,0,0.268675568108545,0.581267877027924,0,0,0,1.24396869324463,0.432359860250884,0.88369703398466,0.063497894292169,0.763976851116555,0,0,0,0,0,1.90622843387113,4.79556075716608,2.933531432838,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,2.43247561282381,0,0,0,0,34.2328572097724,0.144781306667579,0.821905290201534,0.537182889719687,0,6.10795356625974,9.48761329381876,19.893170623361,83.8512259934129,52.0559415430487,30.9315525111078,32.4981554748637,40.8280801058024,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0.117141414992713,0,4.5481500811197,1.03473071292505,0,0.921845842708516,0,1.76221041716467,4.11772108573027,0.413536052245775,0,2.66818894508611,0,1.66435439510497,0.30239029332968,0,0.153461973288062,0.841980283299221,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.362578348774867,0.802025881213139,0,0,0,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.512900250232778,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,4.54352375972973,0.770243085573222,0.460511024178389,0.964856007391714,0.214840489736547,0.145016693914229,0.93749290157711,0.890320356467374,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0,4.7907542728532,0.869932992075073,0.18532421910392,0.429374660225974,0.372158369359667,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,3.23491970517306,0,0,0,0.731140468893853,0,0,0,19.2113798254413,2.75682671773062,0,0,0.578775534266688,0,0,1.239293992399,1.12678241012897,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0.507447609232169,1.52927441428475,1.13929437434833,0,0.822724546172388,1.29694662238543,0,0.79312517629427,2.7774258493143,0,0,0,1.87549976869378,0,2.71024663638998,0,0,0,0.324621940274555,0,3.65175486453108,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.36408156524854,0,9.09235669780522,0.23874448473769,0,0,0.994147647766298,3.65740482667333,0.445234820091624,0,0.422250816255987,0,0.552567831062295,0,0.306806047506464,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,1.11321717794222,183.644694161099,0,0,0.724999575434793,0,0,0,18.6161421550391,0.291604613383254,13.8899995946634,0,0.482385754501632,0,1.21637185924347,1.18219047581419,0.87754158861589,0,0,0,1.48124672601102,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,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| ||
|short_description=p1@C1orf187 | |short_description=p1@C1orf187 | ||
}} | }} |
Latest revision as of 09:55, 16 September 2015
Short description: | p1@C1orf187 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1orf187_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000294485, NM_198545, uc001asr.1_5end |
EntrezGene: | C1orf187 |
HGNC: | 25054 |
UniProt: | Q8NBI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.07e-15 | 25 |
neuronal stem cell | 1.04e-11 | 8 |
neurectodermal cell | 1.65e-10 | 59 |
neuron | 4.32e-09 | 6 |
neuroblast | 4.32e-09 | 6 |
electrically signaling cell | 4.32e-09 | 6 |
embryonic stem cell | 1.06e-07 | 5 |
neuron associated cell | 2.37e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.37e-07 | 17 |
oligodendrocyte | 3.51e-07 | 7 |
macroglial cell | 3.51e-07 | 7 |
astrocyte | 3.51e-07 | 7 |
oligodendrocyte precursor cell | 3.51e-07 | 7 |
ectodermal cell | 3.57e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.46e-12 | 81 |
nervous system | 3.13e-10 | 89 |
neurectoderm | 8.77e-08 | 86 |
vasculature | 2.08e-07 | 78 |
vascular system | 2.08e-07 | 78 |
neural plate | 2.94e-07 | 82 |
presumptive neural plate | 2.94e-07 | 82 |
ectoderm-derived structure | 3.74e-07 | 171 |
ectoderm | 3.74e-07 | 171 |
presumptive ectoderm | 3.74e-07 | 171 |
pigment epithelium of eye | 4.41e-07 | 11 |
atypical epithelium | 9.81e-07 | 4 |