FFCP PHASE1:Hg19::chr5:151047094..151047114,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6678 | |EntrezGene=6678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11219 | |HGNC=11219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000537849_5end | |association_with_transcript=30bp_to_ENST00000537849_5end | ||
|cluster_id=chr5:151047094..151047114,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_9_at_SPARC_5end | |description=CAGE_peak_9_at_SPARC_5end | ||
|id=chr5:151047094..151047114,- | |id=chr5:151047094..151047114,- | ||
|ontology_enrichment_celltype=CL:0000055!3.16e-31!180;CL:0000057!5.22e-19!75;CL:0000222!7.31e-19!119;CL:0000183!2.60e-12!59;CL:0000680!3.56e-12!57;CL:0000056!3.56e-12!57;CL:0000355!3.56e-12!57;CL:0000187!1.41e-11!54;CL:0000192!4.96e-11!42;CL:0000514!4.96e-11!42;CL:0000393!3.26e-10!60;CL:0000211!3.26e-10!60;CL:0000359!7.64e-09!32;CL:0000136!3.01e-08!15;CL:0000213!5.48e-08!57;CL:0000215!5.48e-08!57;CL:0002334!6.11e-07!12 | |ontology_enrichment_celltype=CL:0000055!3.16e-31!180;CL:0000057!5.22e-19!75;CL:0000222!7.31e-19!119;CL:0000183!2.60e-12!59;CL:0000680!3.56e-12!57;CL:0000056!3.56e-12!57;CL:0000355!3.56e-12!57;CL:0000187!1.41e-11!54;CL:0000192!4.96e-11!42;CL:0000514!4.96e-11!42;CL:0000393!3.26e-10!60;CL:0000211!3.26e-10!60;CL:0000359!7.64e-09!32;CL:0000136!3.01e-08!15;CL:0000213!5.48e-08!57;CL:0000215!5.48e-08!57;CL:0002334!6.11e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000134;7.54e-12;55!CL:0000723;5.90e-10;61!CL:0000048;8.19e-10;58!CL:0000359;4.45e-09;32!CL:0000349;6.06e-09;19!CL:0000192;7.45e-09;43!CL:0000136;2.92e-08;13!CL:0002334;4.54e-08;12!CL:0000057;8.51e-08;73!CL:0000034;2.13e-07;69!CL:0000187;2.31e-07;55!CL:0000077;3.94e-07;19!CL:0002320;4.80e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.36e-20,121;CL:0000057,3.71e-20,76;CL:0000680,1.33e-13,58;CL:0000056,1.33e-13,58;CL:0000355,1.33e-13,58;CL:0000187,6.80e-13,55;CL:0000192,3.96e-12,43;CL:0000514,3.96e-12,43;CL:0000048,5.12e-12,427;CL:0000723,4.55e-11,433;CL:0000393,1.57e-10,61;CL:0000211,1.57e-10,61;CL:0000034,4.34e-10,441;CL:0000136,1.72e-09,15;CL:0000359,2.69e-09,32;CL:0000349,6.55e-09,19;CL:0000213,2.68e-08,58;CL:0000215,2.68e-08,58;CL:0002334,6.07e-08,12;CL:0000077,5.42e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;7.45e-09;43!CL:0000355;8.04e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.75e-15!79;UBERON:0007798!9.75e-15!79;UBERON:0004872!2.99e-14!84;UBERON:0004535!8.64e-14!110;UBERON:0001009!2.85e-13!113;UBERON:0000914!9.48e-13!83;UBERON:0002329!9.48e-13!83;UBERON:0003077!9.48e-13!83;UBERON:0003059!9.48e-13!83;UBERON:0007282!9.48e-13!83;UBERON:0009618!9.48e-13!83;UBERON:0007285!9.48e-13!83;UBERON:0001134!2.71e-12!61;UBERON:0002036!2.71e-12!61;UBERON:0003082!2.71e-12!61;UBERON:0000055!2.92e-12!69;UBERON:0004290!8.15e-12!70;UBERON:0002385!1.01e-11!63;UBERON:0001015!1.01e-11!63;UBERON:0000383!1.01e-11!63;UBERON:0001981!4.29e-11!60;UBERON:0007500!4.29e-11!60;UBERON:0004537!4.29e-11!60;UBERON:0006965!4.29e-11!60;UBERON:0001637!1.59e-10!42;UBERON:0003509!1.59e-10!42;UBERON:0004572!1.59e-10!42;UBERON:0005256!4.10e-10!143;UBERON:0000475!5.28e-10!365;UBERON:0003914!1.65e-09!118;UBERON:0000468!3.29e-09!659;UBERON:0000486!9.21e-09!82;UBERON:0004573!1.51e-08!33;UBERON:0004571!1.51e-08!33;UBERON:0000490!1.48e-07!138;UBERON:0001013!3.35e-07!14 | |ontology_enrichment_uberon=UBERON:0002049!9.75e-15!79;UBERON:0007798!9.75e-15!79;UBERON:0004872!2.99e-14!84;UBERON:0004535!8.64e-14!110;UBERON:0001009!2.85e-13!113;UBERON:0000914!9.48e-13!83;UBERON:0002329!9.48e-13!83;UBERON:0003077!9.48e-13!83;UBERON:0003059!9.48e-13!83;UBERON:0007282!9.48e-13!83;UBERON:0009618!9.48e-13!83;UBERON:0007285!9.48e-13!83;UBERON:0001134!2.71e-12!61;UBERON:0002036!2.71e-12!61;UBERON:0003082!2.71e-12!61;UBERON:0000055!2.92e-12!69;UBERON:0004290!8.15e-12!70;UBERON:0002385!1.01e-11!63;UBERON:0001015!1.01e-11!63;UBERON:0000383!1.01e-11!63;UBERON:0001981!4.29e-11!60;UBERON:0007500!4.29e-11!60;UBERON:0004537!4.29e-11!60;UBERON:0006965!4.29e-11!60;UBERON:0001637!1.59e-10!42;UBERON:0003509!1.59e-10!42;UBERON:0004572!1.59e-10!42;UBERON:0005256!4.10e-10!143;UBERON:0000475!5.28e-10!365;UBERON:0003914!1.65e-09!118;UBERON:0000468!3.29e-09!659;UBERON:0000486!9.21e-09!82;UBERON:0004573!1.51e-08!33;UBERON:0004571!1.51e-08!33;UBERON:0000490!1.48e-07!138;UBERON:0001013!3.35e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.34e-08;198!UBERON:0001637;4.76e-08;42!UBERON:0003509;4.76e-08;42!UBERON:0004572;4.76e-08;42!UBERON:0001013;1.55e-07;14!UBERON:0000478;1.74e-07;24!UBERON:0004573;2.06e-07;33!UBERON:0004571;2.06e-07;33 | |||
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| ||
|short_description=p9@SPARC | |short_description=p9@SPARC | ||
}} | }} |
Latest revision as of 10:04, 16 September 2015
Short description: | p9@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SPARC_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 30bp_to_ENST00000537849_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.36e-20 | 121 |
fibroblast | 3.71e-20 | 76 |
muscle precursor cell | 1.33e-13 | 58 |
myoblast | 1.33e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-13 | 58 |
muscle cell | 6.80e-13 | 55 |
smooth muscle cell | 3.96e-12 | 43 |
smooth muscle myoblast | 3.96e-12 | 43 |
multi fate stem cell | 5.12e-12 | 427 |
somatic stem cell | 4.55e-11 | 433 |
electrically responsive cell | 1.57e-10 | 61 |
electrically active cell | 1.57e-10 | 61 |
stem cell | 4.34e-10 | 441 |
fat cell | 1.72e-09 | 15 |
vascular associated smooth muscle cell | 2.69e-09 | 32 |
extraembryonic cell | 6.55e-09 | 19 |
lining cell | 2.68e-08 | 58 |
barrier cell | 2.68e-08 | 58 |
preadipocyte | 6.07e-08 | 12 |
mesothelial cell | 5.42e-07 | 19 |