FFCP PHASE2:Hg19::chr5:151047094..151047114,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6678 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11219 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11219 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 10:05, 16 September 2015
Short description: | p9@SPARC |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SPARC_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 30bp_to_ENST00000537849_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@SPARC |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 1.36e-20 | 121 |
fibroblast | 3.71e-20 | 76 |
muscle precursor cell | 1.33e-13 | 58 |
myoblast | 1.33e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-13 | 58 |
muscle cell | 6.80e-13 | 55 |
smooth muscle cell | 3.96e-12 | 43 |
smooth muscle myoblast | 3.96e-12 | 43 |
multi fate stem cell | 5.12e-12 | 427 |
somatic stem cell | 4.55e-11 | 433 |
Showing 1 to 10 of 20 entries
Ontology term | p-value | n |
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splanchnic layer of lateral plate mesoderm | 2.13e-14 | 83 |
vasculature | 4.01e-14 | 78 |
vascular system | 4.01e-14 | 78 |
skeletal muscle tissue | 1.02e-13 | 62 |
striated muscle tissue | 1.02e-13 | 62 |
myotome | 1.02e-13 | 62 |
cardiovascular system | 2.35e-13 | 109 |
muscle tissue | 3.12e-13 | 64 |
musculature | 3.12e-13 | 64 |
musculature of body | 3.12e-13 | 64 |
Showing 1 to 10 of 41 entries