FFCP PHASE1:Hg19::chr2:242212239..242212257,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:242212239..242212257,-
|short_description=p1@HDLBP
|description=CAGE_peak_1_at_HDLBP_5end
|association_with_transcript=0bp_to_ENST00000422080,ENST000004263...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3069 | |EntrezGene=3069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4857 | |HGNC=4857 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQ82,C9JT62,E7EM71,C9JHS9,B4DTQ2,Q00341 | |UniProt=C9JQ82,C9JT62,E7EM71,C9JHS9,B4DTQ2,Q00341 | ||
|association_with_transcript=0bp_to_ENST00000422080,ENST00000426343,ENST00000427183,ENST00000449504,ENST00000490697,NM_001243900,NM_203346_5end | |||
|cluster_id=chr2:242212239..242212257,- | |||
|coexpression_cluster_id=C938 | |||
|description=CAGE_peak_1_at_HDLBP_5end | |||
|id=chr2:242212239..242212257,- | |||
|ontology_enrichment_celltype=CL:0000055!2.43e-39!180;CL:0000057!1.17e-22!75;CL:0000222!5.43e-21!119;CL:0000680!3.12e-20!57;CL:0000056!3.12e-20!57;CL:0000355!3.12e-20!57;CL:0000220!8.30e-20!246;CL:0000187!1.20e-19!54;CL:0002321!4.92e-19!248;CL:0000183!8.98e-19!59;CL:0000192!7.41e-17!42;CL:0000514!7.41e-17!42;CL:0000359!4.45e-15!32;CL:0000548!5.58e-15!679;CL:0000004!5.58e-15!679;CL:0000255!5.58e-15!679;CL:0000393!1.25e-14!60;CL:0000211!1.25e-14!60;CL:0000012!3.58e-14!682;CL:0002371!2.19e-13!591;CL:0000144!3.31e-13!625;CL:0002620!2.29e-08!23;CL:0002494!3.73e-08!16;CL:0002334!9.30e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.22e-14;32!CL:0000192;3.66e-12;43!CL:0000187;4.90e-11;55!CL:0000057;4.50e-10;73!CL:0000134;1.30e-08;55!CL:0002620;2.31e-08;23!CL:0000393;3.03e-08;61!CL:0000211;3.03e-08;61!CL:0002494;3.66e-08;16!CL:0000723;1.16e-07;61!CL:0000048;1.61e-07;58!CL:0002320;1.74e-07;188!CL:0002334;9.50e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.72e-23,76;CL:0000222,3.83e-21,121;CL:0000680,2.23e-20,58;CL:0000056,2.23e-20,58;CL:0000355,2.23e-20,58;CL:0000187,8.62e-20,55;CL:0002321,2.97e-19,250;CL:0000192,5.53e-17,43;CL:0000514,5.53e-17,43;CL:0000359,4.45e-15,32;CL:0000393,8.51e-15,61;CL:0000211,8.51e-15,61;CL:0002620,2.29e-08,23;CL:0002494,3.73e-08,16;CL:0002334,9.30e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;3.66e-12;43!CL:0000355;9.56e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.11e-23!143;UBERON:0000914!3.46e-23!83;UBERON:0002329!3.46e-23!83;UBERON:0003077!3.46e-23!83;UBERON:0003059!3.46e-23!83;UBERON:0007282!3.46e-23!83;UBERON:0009618!3.46e-23!83;UBERON:0007285!3.46e-23!83;UBERON:0002100!9.95e-22!216;UBERON:0004290!3.29e-21!70;UBERON:0000486!1.26e-20!82;UBERON:0000490!2.00e-19!138;UBERON:0004872!2.27e-19!84;UBERON:0003914!4.71e-19!118;UBERON:0003104!8.28e-19!238;UBERON:0009142!8.28e-19!238;UBERON:0002049!1.12e-18!79;UBERON:0007798!1.12e-18!79;UBERON:0001134!1.52e-18!61;UBERON:0002036!1.52e-18!61;UBERON:0003082!1.52e-18!61;UBERON:0002385!9.83e-18!63;UBERON:0001015!9.83e-18!63;UBERON:0000383!9.83e-18!63;UBERON:0000055!1.53e-16!69;UBERON:0001981!3.92e-16!60;UBERON:0007500!3.92e-16!60;UBERON:0004537!3.92e-16!60;UBERON:0006965!3.92e-16!60;UBERON:0001637!7.26e-16!42;UBERON:0003509!7.26e-16!42;UBERON:0004572!7.26e-16!42;UBERON:0000475!1.43e-15!365;UBERON:0003102!8.54e-15!95;UBERON:0004535!2.92e-13!110;UBERON:0004573!7.36e-13!33;UBERON:0004571!7.36e-13!33;UBERON:0001009!9.15e-13!113;UBERON:0000926!1.78e-12!448;UBERON:0004120!1.78e-12!448;UBERON:0006603!1.78e-12!448;UBERON:0000468!7.74e-12!659;UBERON:0000481!3.25e-11!347;UBERON:0002199!3.90e-09!45;UBERON:0002416!3.90e-09!45;UBERON:0000119!5.81e-09!312;UBERON:0000480!7.12e-09!626;UBERON:0000467!8.43e-09!625;UBERON:0000483!1.44e-08!309;UBERON:0000477!2.10e-08!286;UBERON:0002365!6.10e-08!31;UBERON:0002330!6.10e-08!31;UBERON:0002097!7.21e-08!40;UBERON:0004111!2.24e-07!241;UBERON:0000947!2.72e-07!21;UBERON:0010191!2.72e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.53e-11;33!UBERON:0004571;1.53e-11;33!UBERON:0001637;2.79e-11;42!UBERON:0003509;2.79e-11;42!UBERON:0004572;2.79e-11;42!UBERON:0007500;2.36e-09;56!UBERON:0001981;2.36e-09;56!UBERON:0004537;2.36e-09;56!UBERON:0002049;5.94e-08;75!UBERON:0007798;5.94e-08;75!UBERON:0000055;6.87e-08;65!UBERON:0002384;9.52e-08;198!UBERON:0002365;9.79e-08;31!UBERON:0002330;9.79e-08;31!UBERON:0000947;2.72e-07;21!UBERON:0010191;2.72e-07;21 | |||
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| ||
|short_description=p1@HDLBP | |||
}} | }} |
Latest revision as of 10:06, 16 September 2015
Short description: | p1@HDLBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HDLBP_5end |
Coexpression cluster: | C938_leiomyoma_Smooth_Preadipocyte_hepatic_basal_Adipocyte_Ewing |
Association with transcript: | 0bp_to_ENST00000422080, ENST00000426343, ENST00000427183, ENST00000449504, ENST00000490697, NM_001243900, NM_203346_5end |
EntrezGene: | HDLBP |
HGNC: | 4857 |
UniProt: | C9JQ82C9JT62E7EM71C9JHS9B4DTQ2Q00341 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.72e-23 | 76 |
mesodermal cell | 3.83e-21 | 121 |
muscle precursor cell | 2.23e-20 | 58 |
myoblast | 2.23e-20 | 58 |
multi-potent skeletal muscle stem cell | 2.23e-20 | 58 |
muscle cell | 8.62e-20 | 55 |
embryonic cell | 2.97e-19 | 250 |
smooth muscle cell | 5.53e-17 | 43 |
smooth muscle myoblast | 5.53e-17 | 43 |
vascular associated smooth muscle cell | 4.45e-15 | 32 |
electrically responsive cell | 8.51e-15 | 61 |
electrically active cell | 8.51e-15 | 61 |
skin fibroblast | 2.29e-08 | 23 |
cardiocyte | 3.73e-08 | 16 |
preadipocyte | 9.30e-07 | 12 |