FFCP PHASE1:Hg19::chr3:160122245..160122270,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10051 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14013 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_ENST00000487747_5end | |||
|cluster_id=chr3:160122245..160122270,+ | |||
|coexpression_cluster_id=C1923 | |||
|description=CAGE_peak_7_at_SMC4_5end | |||
|id=chr3:160122245..160122270,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.10e-33!235;DOID:14566!2.18e-32!239;DOID:2531!2.11e-16!51;DOID:0060083!2.11e-16!51;DOID:0050686!8.70e-16!137;DOID:0050687!2.29e-15!143;DOID:1240!6.98e-13!39;DOID:305!9.98e-12!106;DOID:8692!2.14e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.98e-09;39!DOID:8692;4.42e-09;31!DOID:2531;2.31e-08;51!DOID:0060083;2.31e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.09e-20,235;DOID:14566,1.31e-19,239;DOID:1240,7.70e-12,39;DOID:2531,1.51e-11,51;DOID:0060083,1.51e-11,51;DOID:0050687,7.63e-10,143;DOID:0050686,2.92e-09,137;DOID:8692,4.39e-09,31;DOID:305,7.07e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,1.20538905604795,0,0,0,0.204000691244253,0,0.572471974262113,2.05311637609326,2.25976751270645,0.916960868975415,0.821005894499457,0.708397031823113,0,0,0,0,0,0,0.774672005803016,0.284338464974843,0,0,0.401088894940283,0.651032612147555,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0.786021525498329,0.616804496998528,0,0,0,0,0.111410456885174,0.294605907474837,0.664601683750863,0,0.768547918354051,0.520237390239513,1.15106533222573,0,0,0,0,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0.472674085820339,0.665188192387692,1.22968699970376,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.633152558322899,0,0.573673241497627,1.06400514659507,0,0,0,0,0.269421344139376,0.490385709340376,0,0,0,0.624320153660641,0,0.298897361103602,0.117434498643765,0.485618833104395,0.140450806702248,0.204154171254893,3.0708579327942,0,0,0.989067717114227,0,0,0.505008341862199,0.375355559615893,0,0,0,0.150238058906597,0.226864366320042,1.61450672119976,0,0.211931901159562,0.300091096084402,0.309157587715317,0,0,0.675105328965065,0.0974370051611986,0.504867548488229,0.184099797284599,0.161646056818812,1.42003837006646,0.10075209822764,0.339121184620975,0,0,0,0.609868530647977,0.397589304964456,0,1.96956004529204,1.00928340350251,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.354920400119532,1.18009283054671,1.20505514941741,0.55146986366197,0.435758888184812,0.474541238222193,1.21348177344148,0.588664395376038,1.53898862778556,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.686271241194102,0.109750285408626,0,1.80952150340936,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0.761016608938393,0,0,0,0,0.297262324577456,0,0.16798212819886,0,0.806026704325635,1.45316969256981,0.383382679165211,0,0.176096868026452,0.207328115540772,0,0,0.253991577168676,0,0,0,0.514137463516618,1.20137223137567,0,0,0,0.1466765716419,0,0,1.690605505112,0.531876233169741,0,0.514414748524284,0,0,0.714889968290738,0.542621605391443,0.823240336780769,0.325736184293735,0.710783897485092,0.791951872933429,0,0,0.399891964728228,0,0,4.21667878966063,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.358121926479791,2.01753259188349,0,0.431255149719035,0.641715181398742,0,0,0.773288812777695,0.335032530668698,0,1.49801404789436,2.99161459204025,0,0,0,0,0,0.356857977594324,0.157702415033935,0.585707074963566,0,0,0,1.32845119707087,0,0.347534457872331,0,0,0,0.431428401637234,0,0,0,0.30239029332968,0,0.153461973288062,0.841980283299221,0.128139149255701,0,0,0,3.85524234506639,0.177561725313127,0.328508624055237,2.07701771673448,0.813472649219715,0.362578348774867,0,0.644566922551274,0,2.54927635209404,0,0,0.308061348417659,0,0,0.527758144464379,0,0,2.37507507712353,0,0,0,0,0.831076008928724,0.223874754722178,1.31555925987561,0,0.769350375349168,0,0,0.206082023295445,2.93022287418699,0.330037999682352,0,0,0,0.096670718292122,1.07834031980251,0.460511024178389,0,0.751941714077915,1.45016693914229,1.19317278382541,0,0,0.192190067365106,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0.823611089208164,0.235624804691373,0,1.58510321173008,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0,0,0.563391205064483,0.430234056612155,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.427296284509893,0,0.980160863924127,4.27347302789153,0.432807638929335,0.924843963529383,2.71024663638998,0.997896857164083,0.383010740264733,0.635020748171649,1.62310970137278,2.24637742490767,1.59764275323235,1.72347885350326,0,1.01575066680962,0.963528450622197,3.43059502224781,2.55507742614196,0.343505344755765,0.307240764308458,0.223676107892416,0.333698283423817,3.12620952643264,0.556812347790485,1.23087398947712,1.35227839237992,0,0,0,0,0.606802608747567,0.891547074219827,0.568272293612826,0,0,0,0,0.281338832821026,0.111308705022906,0.659215496907038,2.74463030566391,0,0,0.755798243562828,0.102268682502155,1.10776324914963,0,0.449341755736634,1.25314822272926,2.04628948090749,0,0,0,0,0,0,0.7812832832557,0.0874599999961957,0,0.796554137998498,0.762760950878299,2.83665218121524,0.344743373241465,1.16641845353302,3.12524990879926,0,0.120596438625408,0,0.331737779793674,0,0,0.21787692703798,0.975966209950223,0.0769502585037971,0,0.23056390438806,0.359030577639089,0.869178975376065,0,0.0915975934018623,0,1.02193298195737,0.627921025580099,0.664846727600626,0.451191321234361,1.17637520590644,1.00692952185506,1.13852239634511,0.317873157960757,1.05499032264014,0,0.282706142867882,0.432777279484182,0,0,0,0,0.123563938946503,0,0,0.802577647298789,0.234264445725339,2.91927662745066,0.19566461893209,0.971121518136371,0,0,0.30607276163049,0.252746318513952,0.300646838828985,0.103688191397247,0,0.661983911750998,0,0,0.284609546029793,1.52542140314453,0.347119476670262,0,0.609414446062818,0,1.0319161948297,1.83837029449262,1.90032224424082,2.21711734043665,0,0.264768380074501,0,1.50746117111426,1.39100228192093,0,5.08433595110488,0,0,1.9980960958213,0.576361668616424,0.343609788497747,1.54435498075768,0,0,0.707082103850386,1.22313785466253,0.209205692624666,0.203996435272644,0,0,0,0,0,0.525774708558629,0.558564802544508,0,0,0.998395002494955,0,0,0,0,0,0.630265458457789,0.0824158583811665,0.404421263125109,0.196854963029498,1.35477331305255,0,0.681017030557878,1.92903778158023,0.550157746388935,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0.575745591958336,0.714695326373367,0,0.5085370753095,0,0,0,0,0.656740165994712,0,0.226624183040251,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0.197611631897944,0.60896299190448,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,4.84220222276808,1.37478448758317,0,0.570930667089935,0.235265819698172,0.468334905806882,0.144921028610825,0.447764408660622,0.934853239388898,0,0,0.754703705257725,0.889811221596536,0,0.151230923763239,0.466311601748341,0.443565449968902,0,0,0.155262956876259,0.414706207840855,0.265841714557995,1.04349012362347,0.450772826991655,0,1.22061219961398,0.727394636810238,0.214821114084977,0,0,2.80019435264208,0,0.336749488765919,0,0,0,0,0.453411851024545,0.463044948647668,2.93684045407761,1.4327107286519,0,0.657852148736121,1.59020231351293,1.3503982678964,1.35153952522458,1.53744911152768,0.690860683462397,0.911579868532147,0.276516872303462,0,0,0,0.982829546539238,0,1.05656061679314,0.39997479170986,0.320075189082423,0.516644938982447,0,1.10463570151104,0,0,0,0.862598491173454,0.471797825567689,1.85656384926424,1.3578602396322,1.48802444071178,0.619678821295011,0,0,0.630893960010027,0,0,0,0,0,0.319267718114302,0,0.504143392443436,0,0,0,0.294443155503077,0.11796972334774,1.65085738669511,0.808679663052368,0.381382095467167,0,0.198916222116275,0,0.40341013740704,0,0.523813388962845,2.45657876265145,0.147856086217045,0,0,0,0,1.64092442705466,0,0.496211178389294,0.175871244359621,0.511049710558381,0,0,0,0.455324382702595,0.354809480650555,0.806637912890455,0.514464028312255,0,0,1.06374456795571,1.00108261702862,0,0,0.280272163313789,0.913158720509496,0.215927591218621,0.47775168788705,0.0714765441766563,0.47404083519818,2.20858708199438,0.347716544605159,0,0.62164849248911,0.6828739083758,0.691259661814092,0,0.118332000730565,0.255640214277473,0,0.68732060563215,0,0,0.447421727191169,0.490751168076215,0.121917924982269,0,0,0,0.971421986118279,0.467878926924211,2.38740930193642,0.356760272332706,0.5647304101948,2.96839395212659,2.41540549706678,0.0771741581079447,1.31135736302374,0.470317296361523,0.490296643507811,0,0,0.594092800654172,0,0.339854229375634,0.0939839179798536,0.0644578879735772,0.799529247399431,0.357107877211315,0.352894871715692,0.160482733378337,0,0,0,0.788857810965923,0.0679914901909147,0,1.5870805215462,1.11598505450025,0.924351257262837,0.432626562123789,1.13549782351571,0.546327859818478,1.39368351112581,0.509944148709909,0.534434810531121,0.18378979906969,1.25353769646188,0.151557396436479,1.33982065078089,0,0.103432995861895,0,0.952257725854961,0.129177819672012,0.31037357147929,1.90624166387043,0,0.202117188958219,0.217716747896961,0.342233301085281,0,0.0717222053926763,0.332660356546013,0.0814032686109745,1.06727345877715,0,0,0,0,0.406896178315738,0,0.201273793591026,0.320568492303233 | |||
|short_description=p7@SMC4 | |||
}} |
Latest revision as of 10:14, 16 September 2015
Short description: | p7@SMC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SMC4_5end |
Coexpression cluster: | C1923_acute_gall_diffuse_mesenchymal_Preadipocyte_epitheloid_papillary |
Association with transcript: | -16bp_to_ENST00000487747_5end |
EntrezGene: | SMC4 |
HGNC: | 14013 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 2.09e-20 | 235 |
disease of cellular proliferation | 1.31e-19 | 239 |
leukemia | 7.70e-12 | 39 |
hematologic cancer | 1.51e-11 | 51 |
immune system cancer | 1.51e-11 | 51 |
cell type cancer | 7.63e-10 | 143 |
organ system cancer | 2.92e-09 | 137 |
myeloid leukemia | 4.39e-09 | 31 |
carcinoma | 7.07e-07 | 106 |