FFCP PHASE1:Hg19::chr4:159131359..159131372,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55314 | |EntrezGene=55314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25633 | |HGNC=25633 | ||
|TSSclassifier=strong | |||
|UniProt=D6RCA2 | |UniProt=D6RCA2 | ||
|association_with_transcript=13bp_to_ENST00000508243_5end | |association_with_transcript=13bp_to_ENST00000508243_5end | ||
|cluster_id=chr4:159131359..159131372,+ | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_11_at_TMEM144_5end | |description=CAGE_peak_11_at_TMEM144_5end | ||
|id=chr4:159131359..159131372,+ | |id=chr4:159131359..159131372,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.10e-13!42;CL:0000860!6.63e-13!45;CL:0002194!5.59e-10!63;CL:0000576!5.59e-10!63;CL:0000040!5.59e-10!63;CL:0000559!5.59e-10!63;CL:0002009!1.80e-09!65;CL:0000766!6.59e-09!76;CL:0000763!1.63e-08!112;CL:0000049!1.63e-08!112;CL:0000839!2.45e-08!70;CL:0000557!3.94e-08!71 | |ontology_enrichment_celltype=CL:0002057!5.10e-13!42;CL:0000860!6.63e-13!45;CL:0002194!5.59e-10!63;CL:0000576!5.59e-10!63;CL:0000040!5.59e-10!63;CL:0000559!5.59e-10!63;CL:0002009!1.80e-09!65;CL:0000766!6.59e-09!76;CL:0000763!1.63e-08!112;CL:0000049!1.63e-08!112;CL:0000839!2.45e-08!70;CL:0000557!3.94e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000333;5.08e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.05e-15;2!UBERON:0007123;6.04e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;6.73e-11;3!DOID:3908;4.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,6.73e-11,3;DOID:3908,4.79e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.29e-29!115;UBERON:0001049!8.14e-24!57;UBERON:0005068!8.14e-24!57;UBERON:0006241!8.14e-24!57;UBERON:0007135!8.14e-24!57;UBERON:0002616!2.83e-19!59;UBERON:0001017!8.33e-19!82;UBERON:0000955!1.41e-18!69;UBERON:0006238!1.41e-18!69;UBERON:0005743!1.53e-18!86;UBERON:0000073!5.43e-17!94;UBERON:0001016!5.43e-17!94;UBERON:0003075!1.18e-16!86;UBERON:0007284!1.18e-16!86;UBERON:0002346!1.93e-15!90;UBERON:0002020!1.54e-14!34;UBERON:0003528!1.54e-14!34;UBERON:0002780!3.37e-14!41;UBERON:0001890!3.37e-14!41;UBERON:0006240!3.37e-14!41;UBERON:0003080!1.02e-13!42;UBERON:0002791!1.79e-13!33;UBERON:0001893!6.26e-13!34;UBERON:0003076!2.19e-12!15;UBERON:0003057!2.19e-12!15;UBERON:0000062!8.12e-11!511;UBERON:0001869!9.71e-11!32;UBERON:0002298!1.07e-10!8;UBERON:0002619!1.67e-10!22;UBERON:0004733!1.69e-10!12;UBERON:0002028!1.69e-10!12;UBERON:0007277!1.69e-10!12;UBERON:0001950!6.20e-10!20;UBERON:0004732!1.58e-09!13;UBERON:0000033!4.42e-09!123;UBERON:0000153!6.81e-09!129;UBERON:0007811!6.81e-09!129;UBERON:0000956!6.94e-09!25;UBERON:0000203!6.94e-09!25;UBERON:0003056!1.77e-08!61;UBERON:0002308!9.93e-08!9;UBERON:0000125!9.93e-08!9;UBERON:0002420!1.15e-07!9;UBERON:0007245!1.15e-07!9;UBERON:0010009!1.15e-07!9;UBERON:0010011!1.15e-07!9;UBERON:0000454!1.15e-07!9;UBERON:0000025!1.18e-07!194;UBERON:0002371!2.81e-07!80;UBERON:0004121!4.06e-07!169;UBERON:0001871!5.53e-07!7;UBERON:0001474!6.25e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.37e-29;1!UBERON:0001896;9.90e-11;3!UBERON:0006947;9.90e-11;3!UBERON:0005290;9.90e-11;3!UBERON:0004054;9.90e-11;3!UBERON:0005904;2.26e-08;4!UBERON:0000013;5.08e-07;5!UBERON:0002410;5.08e-07;5!UBERON:0002046;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.37e-29,1;UBERON:0006947,9.90e-11,3;UBERON:0004054,9.90e-11,3;UBERON:0001896,1.09e-10,3;UBERON:0005290,1.09e-10,3;UBERON:0010096,1.09e-10,3;UBERON:0005904,2.26e-08,4;UBERON:0006555,4.74e-08,16;UBERON:0004819,4.74e-08,16;UBERON:0000013,5.08e-07,5;UBERON:0002410,5.08e-07,5;UBERON:0002046,5.38e-07,5;UBERON:0004117,5.38e-07,5;UBERON:0007689,5.38e-07,5;UBERON:0007123,5.38e-07,5;UBERON:0003091,5.38e-07,5 | |||
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| ||
|short_description=p11@TMEM144 | |short_description=p11@TMEM144 | ||
}} | }} |
Latest revision as of 10:27, 16 September 2015
Short description: | p11@TMEM144 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TMEM144_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 13bp_to_ENST00000508243_5end |
EntrezGene: | TMEM144 |
HGNC: | 25633 |
UniProt: | D6RCA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 2.37e-29 | 1 |
male genital duct | 9.90e-11 | 3 |
internal male genitalia | 9.90e-11 | 3 |
medulla oblongata | 1.09e-10 | 3 |
myelencephalon | 1.09e-10 | 3 |
future myelencephalon | 1.09e-10 | 3 |
duct of male reproductive system | 2.26e-08 | 4 |
excretory tube | 4.74e-08 | 16 |
kidney epithelium | 4.74e-08 | 16 |
sympathetic nervous system | 5.08e-07 | 5 |
autonomic nervous system | 5.08e-07 | 5 |
thyroid gland | 5.38e-07 | 5 |
pharyngeal pouch | 5.38e-07 | 5 |
thyroid diverticulum | 5.38e-07 | 5 |
pharyngeal pouch 2 | 5.38e-07 | 5 |
thyroid primordium | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 6.73e-11 | 3 |
non-small cell lung carcinoma | 4.79e-07 | 5 |