FFCP PHASE1:Hg19::chr12:112450928..112450976,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89894 | |EntrezGene=89894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25084 | |HGNC=25084 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NCL8,Q9BWF8 | |UniProt=Q8NCL8,Q9BWF8 | ||
|association_with_transcript=0bp_to_ENST00000354825,uc001ttc.1,uc001ttd.1,uc001tte.1,uc001ttf.1,uc001ttg.1,uc001tth.1,uc001tti.1_5end | |association_with_transcript=0bp_to_ENST00000354825,uc001ttc.1,uc001ttd.1,uc001tte.1,uc001ttf.1,uc001ttg.1,uc001tth.1,uc001tti.1_5end | ||
|cluster_id=chr12:112450928..112450976,- | |||
|description=CAGE_peak_1_at_TMEM116_5end | |description=CAGE_peak_1_at_TMEM116_5end | ||
|id=chr12:112450928..112450976,- | |id=chr12:112450928..112450976,- |
Latest revision as of 10:34, 16 September 2015
Short description: | p1@TMEM116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM116_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000354825, uc001ttc.1, uc001ttd.1, uc001tte.1, uc001ttf.1, uc001ttg.1, uc001tth.1, uc001tti.1_5end |
EntrezGene: | TMEM116 |
HGNC: | 25084 |
UniProt: | Q8NCL8Q9BWF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@TMEM116 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.50e-12 | 53 |
common lymphoid progenitor | 1.50e-12 | 53 |
lymphoid lineage restricted progenitor cell | 3.38e-12 | 52 |
mature alpha-beta T cell | 8.56e-09 | 18 |
alpha-beta T cell | 8.56e-09 | 18 |
immature T cell | 8.56e-09 | 18 |
mature T cell | 8.56e-09 | 18 |
immature alpha-beta T cell | 8.56e-09 | 18 |
T cell | 6.12e-08 | 25 |
pro-T cell | 6.12e-08 | 25 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
adult organism | 2.54e-22 | 114 |
neural tube | 2.13e-19 | 56 |
neural rod | 2.13e-19 | 56 |
future spinal cord | 2.13e-19 | 56 |
neural keel | 2.13e-19 | 56 |
nervous system | 2.61e-18 | 89 |
regional part of nervous system | 4.31e-18 | 53 |
regional part of brain | 4.31e-18 | 53 |
central nervous system | 9.25e-18 | 81 |
brain | 2.62e-16 | 68 |
Showing 1 to 10 of 33 entries