FFCP PHASE1:Hg19::chr12:112451207..112451218,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10961 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13799 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENST00000553161_5end | |||
|cluster_id=chr12:112451207..112451218,+ | |||
|description=CAGE_peak_2_at_ERP29_5end | |||
|id=chr12:112451207..112451218,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.15e-17!180;CL:0000222!1.88e-08!119;CL:1000449!3.90e-08!16;CL:0000057!1.05e-07!75;CL:0000183!1.43e-07!59;CL:0000548!4.05e-07!679;CL:0000004!4.05e-07!679;CL:0000255!4.05e-07!679;CL:0002321!6.14e-07!248;CL:0002681!8.01e-07!13;CL:0002584!8.01e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.12e-08;15!CL:0002681;5.44e-07;12!CL:0002584;5.44e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.30e-09,121;CL:1000449,3.25e-08,15;CL:0000057,1.62e-07,76;CL:0002321,2.90e-07,250;CL:0002681,6.69e-07,12;CL:0002584,6.69e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.28e-08!143;UBERON:0004211!3.90e-08!16;UBERON:0001285!3.90e-08!16;UBERON:0007684!3.90e-08!16;UBERON:0003220!3.90e-08!16;UBERON:0004208!3.90e-08!16;UBERON:0006555!8.49e-08!17;UBERON:0005103!8.49e-08!17;UBERON:0000083!8.49e-08!17;UBERON:0009201!8.49e-08!17;UBERON:0004819!8.49e-08!17;UBERON:0006553!8.49e-08!17;UBERON:0003074!8.49e-08!17;UBERON:0003060!8.49e-08!17;UBERON:0000080!1.49e-07!18;UBERON:0002120!1.49e-07!18;UBERON:0004875!1.49e-07!18;UBERON:0005721!1.49e-07!18;UBERON:0005754!1.49e-07!18;UBERON:0007297!1.49e-07!18;UBERON:0004876!5.05e-07!20;UBERON:0001225!8.01e-07!13;UBERON:0008987!8.01e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.12e-08;15!UBERON:0004819;3.12e-08;15!UBERON:0001285;3.12e-08;15!UBERON:0007684;3.12e-08;15!UBERON:0001225;5.44e-07;12!UBERON:0008987;5.44e-07;12!UBERON:0000353;8.25e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,3.25e-08,15;UBERON:0009773,3.25e-08,15;UBERON:0001231,3.25e-08,15;UBERON:0001285,3.25e-08,15;UBERON:0007684,3.25e-08,15;UBERON:0004208,3.25e-08,15;UBERON:0006555,7.55e-08,16;UBERON:0004819,7.55e-08,16;UBERON:0007503,8.87e-08,78;UBERON:0000119,3.84e-07,309;UBERON:0000483,6.03e-07,306;UBERON:0001225,6.69e-07,12;UBERON:0008987,6.69e-07,12;UBERON:0000353,7.74e-07,15 | |||
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| |||
|short_description=p2@ERP29 | |||
}} |
Latest revision as of 10:37, 16 September 2015
Short description: | p2@ERP29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ERP29_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000553161_5end |
EntrezGene: | ERP29 |
HGNC: | 13799 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.30e-09 | 121 |
epithelial cell of nephron | 3.25e-08 | 15 |
fibroblast | 1.62e-07 | 76 |
embryonic cell | 2.90e-07 | 250 |
kidney cortical cell | 6.69e-07 | 12 |
renal cortical epithelial cell | 6.69e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 3.25e-08 | 15 |
renal tubule | 3.25e-08 | 15 |
nephron tubule | 3.25e-08 | 15 |
nephron | 3.25e-08 | 15 |
uriniferous tubule | 3.25e-08 | 15 |
nephrogenic mesenchyme | 3.25e-08 | 15 |
excretory tube | 7.55e-08 | 16 |
kidney epithelium | 7.55e-08 | 16 |
epithelial vesicle | 8.87e-08 | 78 |
cell layer | 3.84e-07 | 309 |
epithelium | 6.03e-07 | 306 |
cortex of kidney | 6.69e-07 | 12 |
renal parenchyma | 6.69e-07 | 12 |
parenchyma | 7.74e-07 | 15 |