FFCP PHASE1:Hg19::chr14:89259098..89259108,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=161436 | |EntrezGene=161436 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18197 | |HGNC=18197 | ||
|TSSclassifier=strong | |||
|UniProt=Q05BV3 | |UniProt=Q05BV3 | ||
|association_with_transcript=-2bp_to_ENST00000352093,ENST00000554922,NM_183387_5end | |||
|cluster_id=chr14:89259098..89259108,- | |||
|description=CAGE_peak_10_at_EML5_5end | |||
|id=chr14:89259098..89259108,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;5.44e-45;5!CL:0002321;1.44e-15;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.53e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.18e-37;6!DOID:4960;7.62e-26;1!DOID:0070004;7.62e-26;1!DOID:171;5.96e-23;10!DOID:3095;7.66e-11;22!DOID:2994;7.66e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.10e-38,6;DOID:4960,1.26e-25,1;DOID:0070004,1.26e-25,1;DOID:171,4.76e-23,10;DOID:3095,6.93e-11,22;DOID:2994,6.93e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.59e-18!57;UBERON:0005068!7.59e-18!57;UBERON:0006241!7.59e-18!57;UBERON:0007135!7.59e-18!57;UBERON:0002791!1.22e-17!33;UBERON:0002780!1.73e-17!41;UBERON:0001890!1.73e-17!41;UBERON:0006240!1.73e-17!41;UBERON:0002616!4.82e-17!59;UBERON:0002020!5.20e-17!34;UBERON:0003528!5.20e-17!34;UBERON:0001893!5.20e-17!34;UBERON:0003080!5.80e-17!42;UBERON:0000073!1.15e-16!94;UBERON:0001016!1.15e-16!94;UBERON:0000955!2.09e-16!69;UBERON:0006238!2.09e-16!69;UBERON:0002619!2.66e-16!22;UBERON:0001869!4.18e-16!32;UBERON:0001950!3.92e-15!20;UBERON:0007023!7.54e-15!115;UBERON:0005743!1.46e-14!86;UBERON:0001017!3.62e-14!82;UBERON:0000956!4.69e-14!25;UBERON:0000203!4.69e-14!25;UBERON:0003075!1.37e-13!86;UBERON:0007284!1.37e-13!86;UBERON:0003056!3.56e-13!61;UBERON:0002346!1.07e-12!90;UBERON:0001871!3.66e-11!7;UBERON:0000033!6.01e-10!123;UBERON:0000153!3.61e-09!129;UBERON:0007811!3.61e-09!129;UBERON:0002771!1.15e-08!3;UBERON:0004121!1.62e-07!169;UBERON:0000924!3.52e-07!173;UBERON:0006601!3.52e-07!173;UBERON:0000200!5.08e-07!6;UBERON:0000007!8.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;5.44e-45;5!UBERON:0002410;5.44e-45;5!UBERON:0000010;2.09e-25;8!UBERON:0001954;7.77e-14;2!UBERON:0003022;7.77e-14;2!UBERON:0002421;7.77e-14;2!UBERON:0002600;7.77e-14;2!UBERON:0000007;1.21e-13;2!UBERON:0003296;1.80e-07;4!UBERON:0010133;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.47e-45,5;UBERON:0002410,3.47e-45,5;UBERON:0000010,1.63e-25,8;UBERON:0001954,8.28e-14,2;UBERON:0003022,8.28e-14,2;UBERON:0002421,8.28e-14,2;UBERON:0002600,8.28e-14,2;UBERON:0000007,1.21e-13,2;UBERON:0001016,8.28e-10,89;UBERON:0003296,1.80e-07,4;UBERON:0010133,1.80e-07,4 | |||
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| ||
|short_description=p10@EML5 | |||
}} | }} |
Latest revision as of 10:56, 16 September 2015
Short description: | p10@EML5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EML5_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000352093, ENST00000554922, NM_183387_5end |
EntrezGene: | EML5 |
HGNC: | 18197 |
UniProt: | Q05BV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.47e-45 | 5 |
autonomic nervous system | 3.47e-45 | 5 |
peripheral nervous system | 1.63e-25 | 8 |
Ammon's horn | 8.28e-14 | 2 |
lobe parts of cerebral cortex | 8.28e-14 | 2 |
hippocampal formation | 8.28e-14 | 2 |
limbic lobe | 8.28e-14 | 2 |
pituitary gland | 1.21e-13 | 2 |
nervous system | 8.28e-10 | 89 |
gland of diencephalon | 1.80e-07 | 4 |
neuroendocrine gland | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.10e-38 | 6 |
bone marrow cancer | 1.26e-25 | 1 |
myeloma | 1.26e-25 | 1 |
neuroectodermal tumor | 4.76e-23 | 10 |
germ cell and embryonal cancer | 6.93e-11 | 22 |
germ cell cancer | 6.93e-11 | 22 |