FFCP PHASE1:Hg19::chr8:13372298..13372312,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:13372298..13372312,- to FFCP PHASE1:Hg19::chr8:13372298..13372312,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10395 | |EntrezGene=10395 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2897 | |HGNC=2897 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QB1 | |UniProt=Q96QB1 | ||
|association_with_transcript=-24bp_to_ENST00000316609_5end | |||
|cluster_id=chr8:13372298..13372312,- | |||
|coexpression_cluster_id=C1095 | |||
|description=CAGE_peak_24_at_DLC1_5end | |||
|id=chr8:13372298..13372312,- | |||
|ontology_enrichment_celltype=CL:0000057!1.33e-09!75;CL:0002620!1.18e-08!23;CL:0000055!2.72e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002573;1.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,3.04e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.42e-11;4!UBERON:0007284;1.42e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.03e-26!115;UBERON:0001049!2.74e-10!57;UBERON:0005068!2.74e-10!57;UBERON:0006241!2.74e-10!57;UBERON:0007135!2.74e-10!57;UBERON:0001950!6.19e-10!20;UBERON:0002619!1.23e-09!22;UBERON:0002616!1.24e-09!59;UBERON:0002346!3.20e-09!90;UBERON:0001893!3.34e-09!34;UBERON:0003075!3.57e-09!86;UBERON:0007284!3.57e-09!86;UBERON:0002780!4.83e-09!41;UBERON:0001890!4.83e-09!41;UBERON:0006240!4.83e-09!41;UBERON:0002020!4.84e-09!34;UBERON:0003528!4.84e-09!34;UBERON:0000956!6.82e-09!25;UBERON:0000203!6.82e-09!25;UBERON:0002791!1.12e-08!33;UBERON:0003080!1.21e-08!42;UBERON:0001869!1.54e-08!32;UBERON:0000468!4.70e-08!659;UBERON:0000479!5.53e-08!787;UBERON:0003102!6.99e-08!95;UBERON:0000073!8.00e-08!94;UBERON:0001016!8.00e-08!94;UBERON:0000153!1.21e-07!129;UBERON:0007811!1.21e-07!129;UBERON:0000924!1.98e-07!173;UBERON:0006601!1.98e-07!173;UBERON:0004121!2.68e-07!169;UBERON:0007100!3.37e-07!27;UBERON:0000033!3.50e-07!123;UBERON:0000955!4.00e-07!69;UBERON:0006238!4.00e-07!69;UBERON:0000481!4.37e-07!347;UBERON:0000475!4.71e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;4.99e-09;8!UBERON:0010313;5.62e-08;10!UBERON:0003978;1.92e-07;3!UBERON:0000946;1.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.02e-09,8;UBERON:0010313,5.98e-08,10;UBERON:0002342,5.98e-08,10;UBERON:0005062,5.98e-08,10;UBERON:0003978,1.14e-07,3;UBERON:0009751,1.14e-07,3;UBERON:0000946,1.14e-07,3;UBERON:0002523,1.14e-07,3;UBERON:0005983,1.14e-07,3;UBERON:0002165,1.14e-07,3;UBERON:0002062,1.14e-07,3;UBERON:0007280,1.14e-07,3;UBERON:0004797,6.87e-07,7;UBERON:0000948,7.03e-07,24;UBERON:0005498,7.03e-07,24;UBERON:0004140,7.03e-07,24;UBERON:0009881,7.03e-07,24;UBERON:0004141,7.03e-07,24;UBERON:0003084,7.03e-07,24;UBERON:0007005,7.03e-07,24;UBERON:0004139,7.03e-07,24;UBERON:0004291,7.03e-07,24;UBERON:0002426,9.91e-07,1;UBERON:0003831,9.91e-07,1;UBERON:0003898,9.91e-07,1;UBERON:0004830,9.91e-07,1;UBERON:0003830,9.91e-07,1;UBERON:0005175,9.91e-07,1;UBERON:0001774,9.91e-07,1;UBERON:0001103,9.91e-07,1;UBERON:0010084,9.91e-07,1 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.289693037921647,3.1811437882044,0.973269740605272,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.563057402416611,1.53316637465883,0,0,0,0,0,1.49091585508596,0.12663051166458,0.529636723252875,1.14734648299525,0,0,1.06748995729705,0,0.933633106199299,0.134710672069688,0.163461903113459,0,0,0.468642863667593,0.936480230490962,0,0,0.587172493218824,0.323745888736263,0.421352420106746,1.02077085627447,0.122834317311768,0.206651562351531,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0.877955241761676,0.30648779579902,0.150238058906597,0,0.717558542755448,0.213557388818567,0,1.20036438433761,0.515262646192195,1.54584324027377,0.37223371266318,0.506328996723799,0.292311015483596,1.00973509697646,0.0920498986422993,0.80823028409406,0.710019185033229,0.302256294682921,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.22001485746285,0.258543431515556,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.260650843404249,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.321707842287215,0,0.462629081407967,0.177561725313127,0.574890092096664,0,0.348631135379878,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.48335359146061,0,0.307007349452259,0.275673144969061,0.322260734604821,0.290033387828457,0.255679882248303,0.712256285173899,0,0,0,0,0,0.94443704049192,0,0.308033580176089,0,0,0,0.429374660225974,0,1.58189712359363,0.38126038784765,0,0,0,0,0.899362287916574,0,0.471249609382746,0,0,0,0,0,0,0.9554993798559,0,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0.563391205064483,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0.111443384277478,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0.311039587661807,0,0,0,0.986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.482385754501632,0,0.442317039724898,0.295547618953547,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0.889563386041866,0.123563938946503,0.417687798021821,0.269604531922708,3.21031058919516,0,0,0,0,0.394584402849391,1.20990716048664,0.61214552326098,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.290967049465258,0,0,0,0,0.50648636764703,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,1.83328339209347,0.717873024576814,0.798716001995964,0.858452096273142,0.446342914883745,3.02325626190268,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.996637174564964,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0.213574825135389,2.82967749179399,0.414239055347196,0,0,0,0,1.08803560673895,1.7548292581589,0.306345576763462,2.29510841496863,0,0,0.122026264901963,0.751145584238999,0,0.443716206147409,0.248385611765534,0,0,0,0,0,0,0,0.447764408660622,1.16856654923612,0.554805861502613,0.189403005275089,0.251567901752575,1.77962244319307,0,0.151230923763239,0.466311601748341,0.147855149989634,0.159296767163702,0,0.310525913752519,0.829412415681711,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0.363697318405119,0.107410557042488,0.464033759878494,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,1.79052119825112,0,0,2.62103131660833,0.169732529954025,0,0.247871528518004,0,0.636008701306837,0,0,1.05802783107205,0,0.642292250964595,1.41696576325585,0.319267718114302,0.41023272848151,0,0.622415272177961,0.322951291263702,0,0,0,0,0,0,0,0.994581110581374,0.526472298444801,0,0,0,0,0,0.472763092328763,0.781078098613847,0.826747186004736,0.126831620387814,0,0,1.48863353516788,0,0,0,0.336283722218824,0,0.682986574053893,0.532214220975833,0,0,0.543757863814654,0.526182188502793,0,0,0.313972371402056,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,1.06498800657509,1.19298766662821,0,0,0,0,0,0,0,0.647428837187895,0.410651227424988,1.1598144313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| ||
|short_description=p24@DLC1 | |||
}} | }} |
Latest revision as of 11:01, 16 September 2015
Short description: | p24@DLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_DLC1_5end |
Coexpression cluster: | C1095_heart_skin_lung_neuroblastoma_skeletal_adipose_rectum |
Association with transcript: | -24bp_to_ENST00000316609_5end |
EntrezGene: | DLC1 |
HGNC: | 2897 |
UniProt: | Q96QB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 3.04e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 5.02e-09 | 8 |
neural crest-derived structure | 5.98e-08 | 10 |
neural crest | 5.98e-08 | 10 |
neural fold | 5.98e-08 | 10 |
valve | 1.14e-07 | 3 |
cardiac mesenchyme | 1.14e-07 | 3 |
cardial valve | 1.14e-07 | 3 |
tunica intima | 1.14e-07 | 3 |
heart layer | 1.14e-07 | 3 |
endocardium | 1.14e-07 | 3 |
endocardial cushion | 1.14e-07 | 3 |
presumptive endocardium | 1.14e-07 | 3 |
blood vessel layer | 6.87e-07 | 7 |
heart | 7.03e-07 | 24 |
primitive heart tube | 7.03e-07 | 24 |
primary heart field | 7.03e-07 | 24 |
anterior lateral plate mesoderm | 7.03e-07 | 24 |
heart tube | 7.03e-07 | 24 |
heart primordium | 7.03e-07 | 24 |
cardiac mesoderm | 7.03e-07 | 24 |
cardiogenic plate | 7.03e-07 | 24 |
heart rudiment | 7.03e-07 | 24 |
chest muscle | 9.91e-07 | 1 |
respiratory system muscle | 9.91e-07 | 1 |
skeletal muscle of trunk | 9.91e-07 | 1 |
respiratory system skeletal muscle | 9.91e-07 | 1 |
thoracic segment muscle | 9.91e-07 | 1 |
chest organ | 9.91e-07 | 1 |
muscle of trunk | 9.91e-07 | 1 |
diaphragm | 9.91e-07 | 1 |
future diaphragm | 9.91e-07 | 1 |