FFCP PHASE1:Hg19::chr20:43936937..43936967,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8785 | |EntrezGene=8785 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6910 | |HGNC=6910 | ||
|TSSclassifier=strong | |||
|UniProt=O95460,A6NNA4,A2RRP8,A5D8U1 | |UniProt=O95460,A6NNA4,A2RRP8,A5D8U1 | ||
|association_with_transcript=0bp_to_ENST00000255132,ENST00000342716,ENST00000353917,ENST00000360607,ENST00000372751,NM_003833,NM_030590,NM_030592,uc002xnn.2,uc002xno.2,uc002xnp.2_5end | |association_with_transcript=0bp_to_ENST00000255132,ENST00000342716,ENST00000353917,ENST00000360607,ENST00000372751,NM_003833,NM_030590,NM_030592,uc002xnn.2,uc002xno.2,uc002xnp.2_5end | ||
|cluster_id=chr20:43936937..43936967,- | |||
|coexpression_cluster_id=C243 | |coexpression_cluster_id=C243 | ||
|description=CAGE_peak_1_at_MATN4_5end | |description=CAGE_peak_1_at_MATN4_5end |
Latest revision as of 11:04, 16 September 2015
Short description: | p1@MATN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MATN4_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | 0bp_to_ENST00000255132, ENST00000342716, ENST00000353917, ENST00000360607, ENST00000372751, NM_003833, NM_030590, NM_030592, uc002xnn.2, uc002xno.2, uc002xnp.2_5end |
EntrezGene: | MATN4 |
HGNC: | 6910 |
UniProt: | O95460A6NNA4A2RRP8A5D8U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@MATN4 |
---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.17e-07 | 6 |
chondrocyte | 1.17e-07 | 6 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.41e-14 | 3 |
internal male genitalia | 1.41e-14 | 3 |
vas deferens | 1.31e-11 | 1 |
spermatic cord | 1.31e-11 | 1 |
seminal vesicle | 1.60e-11 | 1 |
seminal fluid secreting gland | 1.60e-11 | 1 |
dura mater | 1.97e-11 | 1 |
future meninx | 1.97e-11 | 1 |
ectomeninx | 1.97e-11 | 1 |
future dura mater | 1.97e-11 | 1 |
Showing 1 to 10 of 25 entries