FFCP PHASE1:Hg19::chr1:11907829..11907847,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:11907829..11907847,- to FFCP PHASE1:Hg19::chr1:11907829..11907847,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4878 | |EntrezGene=4878 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7939 | |HGNC=7939 | ||
|TSSclassifier=strong | |||
|UniProt=P01160 | |UniProt=P01160 | ||
|association_with_transcript=0bp_to_ENST00000376480,NM_006172,uc001ati.2_5end | |||
|cluster_id=chr1:11907829..11907847,- | |||
|coexpression_cluster_id=C188 | |||
|description=CAGE_peak_1_at_NPPA_5end | |||
|id=chr1:11907829..11907847,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.94e-18;4!UBERON:0007284;5.94e-18;4!UBERON:0010227;3.06e-09;1!UBERON:0004140;3.58e-09;1!UBERON:0010226;4.52e-09;1!UBERON:0000358;6.16e-09;1 | |||
|ontology_enrichment_disease=DOID:114!6.13e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.73e-16;2!DOID:178;5.70e-09;1!DOID:326;5.70e-09;1!DOID:3978;5.70e-09;1!DOID:3394;5.70e-09;1!DOID:5844;5.70e-09;1!DOID:1287;1.37e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.73e-16,2;DOID:178,5.70e-09,1;DOID:326,5.70e-09,1;DOID:3978,5.70e-09,1;DOID:3394,5.70e-09,1;DOID:5844,5.70e-09,1;DOID:1287,1.37e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-20!115;UBERON:0001049!8.96e-15!57;UBERON:0005068!8.96e-15!57;UBERON:0006241!8.96e-15!57;UBERON:0007135!8.96e-15!57;UBERON:0001950!1.12e-14!20;UBERON:0001017!2.01e-14!82;UBERON:0000073!9.81e-14!94;UBERON:0001016!9.81e-14!94;UBERON:0005743!1.88e-13!86;UBERON:0002619!3.67e-13!22;UBERON:0007100!7.28e-13!27;UBERON:0002780!7.41e-13!41;UBERON:0001890!7.41e-13!41;UBERON:0006240!7.41e-13!41;UBERON:0002616!1.14e-12!59;UBERON:0003075!1.18e-12!86;UBERON:0007284!1.18e-12!86;UBERON:0003080!1.85e-12!42;UBERON:0002020!2.21e-12!34;UBERON:0003528!2.21e-12!34;UBERON:0001893!2.76e-12!34;UBERON:0002346!8.25e-12!90;UBERON:0001869!1.62e-11!32;UBERON:0000956!2.51e-11!25;UBERON:0000203!2.51e-11!25;UBERON:0000955!3.57e-11!69;UBERON:0006238!3.57e-11!69;UBERON:0002791!4.44e-11!33;UBERON:0000200!8.33e-10!6;UBERON:0004151!9.56e-10!3;UBERON:0003978!1.16e-09!3;UBERON:0009751!1.16e-09!3;UBERON:0000946!1.16e-09!3;UBERON:0002523!1.16e-09!3;UBERON:0005983!1.16e-09!3;UBERON:0002165!1.16e-09!3;UBERON:0002062!1.16e-09!3;UBERON:0007280!1.16e-09!3;UBERON:0004121!6.75e-09!169;UBERON:0000025!1.54e-08!194;UBERON:0000924!1.65e-08!173;UBERON:0006601!1.65e-08!173;UBERON:0001872!1.74e-08!5;UBERON:0000948!4.12e-08!24;UBERON:0005498!4.12e-08!24;UBERON:0004140!4.12e-08!24;UBERON:0009881!4.12e-08!24;UBERON:0004141!4.12e-08!24;UBERON:0003084!4.12e-08!24;UBERON:0007005!4.12e-08!24;UBERON:0004139!4.12e-08!24;UBERON:0004291!4.12e-08!24;UBERON:0002771!5.45e-08!3;UBERON:0000483!1.04e-07!309;UBERON:0001871!1.30e-07!7;UBERON:0000119!1.57e-07!312;UBERON:0000988!1.72e-07!3;UBERON:0003056!2.01e-07!61;UBERON:0002081!4.50e-07!2;UBERON:0002133!4.63e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.66e-29;25!UBERON:0004151;5.79e-24;3!UBERON:0003978;9.89e-24;3!UBERON:0000946;9.89e-24;3!UBERON:0002081;1.18e-16;2!UBERON:0002133;1.27e-16;2!UBERON:0000948;2.62e-16;22!UBERON:0002079;3.06e-09;1!UBERON:0002135;3.31e-09;1!UBERON:0002134;3.87e-09;1!UBERON:0005208;3.87e-09;1!UBERON:0004145;3.87e-09;1!UBERON:0005946;3.87e-09;1!UBERON:0005965;3.87e-09;1!UBERON:0002078;3.87e-09;1!UBERON:0002084;4.52e-09;1!UBERON:0002082;4.52e-09;1!UBERON:0002146;7.18e-09;1!UBERON:0005623;7.18e-09;1!UBERON:0007029;7.75e-09;1!UBERON:0002426;1.71e-08;1!UBERON:0003831;1.71e-08;1!UBERON:0003898;1.71e-08;1!UBERON:0004830;1.71e-08;1!UBERON:0003830;1.71e-08;1!UBERON:0005175;1.71e-08;1!UBERON:0001774;1.71e-08;1!UBERON:0001103;1.71e-08;1!UBERON:0000922;3.48e-08;49!UBERON:0010313;1.78e-07;10!UBERON:0003103;1.94e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.02e-26,27;UBERON:0004151,5.79e-24,3;UBERON:0003978,9.89e-24,3;UBERON:0009751,9.89e-24,3;UBERON:0000946,9.89e-24,3;UBERON:0002523,9.89e-24,3;UBERON:0005983,9.89e-24,3;UBERON:0002165,9.89e-24,3;UBERON:0002062,9.89e-24,3;UBERON:0007280,9.89e-24,3;UBERON:0002081,1.18e-16,2;UBERON:0010227,1.18e-16,2;UBERON:0002133,1.27e-16,2;UBERON:0000948,6.85e-15,24;UBERON:0005498,6.85e-15,24;UBERON:0004140,6.85e-15,24;UBERON:0009881,6.85e-15,24;UBERON:0004141,6.85e-15,24;UBERON:0003084,6.85e-15,24;UBERON:0007005,6.85e-15,24;UBERON:0004139,6.85e-15,24;UBERON:0004291,6.85e-15,24;UBERON:0003103,1.15e-11,68;UBERON:0004797,1.74e-10,7;UBERON:0002079,3.06e-09,1;UBERON:0002135,3.31e-09,1;UBERON:0002134,3.87e-09,1;UBERON:0005208,3.87e-09,1;UBERON:0005946,3.87e-09,1;UBERON:0005965,3.87e-09,1;UBERON:0002078,3.87e-09,1;UBERON:0002084,4.52e-09,1;UBERON:0002082,4.52e-09,1;UBERON:0010226,4.52e-09,1;UBERON:0002146,7.18e-09,1;UBERON:0005623,7.18e-09,1;UBERON:0007029,7.75e-09,1;UBERON:0002426,1.42e-08,1;UBERON:0003831,1.42e-08,1;UBERON:0003898,1.42e-08,1;UBERON:0004830,1.42e-08,1;UBERON:0003830,1.42e-08,1;UBERON:0005175,1.42e-08,1;UBERON:0001774,1.42e-08,1;UBERON:0001103,1.42e-08,1;UBERON:0010084,1.42e-08,1;UBERON:0010313,1.78e-07,10;UBERON:0002342,1.78e-07,10;UBERON:0005062,1.78e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80338800071154,0,0,0.933633106199299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,3.79217710565611,1.45802306691627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,7497.05677975239,11.9163420486076,1487.43290692316,62.8988851571822,134.347753066747,517.757781265144,3945.95407303538,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.789744236554321,0,0,0.314727528809989,0,0,0,54638.4577012439,316.479961834676,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,19.4933338323586,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,0,1.17983165588629,0,0,0,0,0,0.468334905806882,2.3187364577732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.253663240775627,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,10.1999308542419,0,0.596852325484105,0,0,0,1.50962843566674,0,0.218559560503957,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,4.3820183294791,0,0,0.157771562193185,0.475940431336403,0,0,0,0,0,0,0,1.14028650910293,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0.129177819672012,0.248298857183432,0,0,0,0,0,0,0,3.99192427855216,0,0,0,0,37.5425507845527,0.122241444182866,0,0,116.738800282795,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80338800071154,0,0,0.933633106199299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,3.79217710565611,1.45802306691627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,7497.05677975239,11.9163420486076,1487.43290692316,62.8988851571822,134.347753066747,517.757781265144,3945.95407303538,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.789744236554321,0,0,0.314727528809989,0,0,0,54638.4577012439,316.479961834676,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,19.4933338323586,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,0,1.17983165588629,0,0,0,0,0,0.468334905806882,2.3187364577732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.253663240775627,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,10.1999308542419,0,0.596852325484105,0,0,0,1.50962843566674,0,0.218559560503957,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,4.3820183294791,0,0,0.157771562193185,0.475940431336403,0,0,0,0,0,0,0,1.14028650910293,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0.129177819672012,0.248298857183432,0,0,0,0,0,0,0,3.99192427855216,0,0,0,0,37.5425507845527,0.122241444182866,0,0,116.738800282795,0 | ||
|short_description=p1@NPPA | |||
}} | }} |
Latest revision as of 11:18, 16 September 2015
Short description: | p1@NPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPPA_5end |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | 0bp_to_ENST00000376480, NM_006172, uc001ati.2_5end |
EntrezGene: | NPPA |
HGNC: | 7939 |
UniProt: | P01160 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.73e-16 | 2 |
vascular disease | 5.70e-09 | 1 |
ischemia | 5.70e-09 | 1 |
extrinsic cardiomyopathy | 5.70e-09 | 1 |
myocardial ischemia | 5.70e-09 | 1 |
myocardial infarction | 5.70e-09 | 1 |
cardiovascular system disease | 1.37e-08 | 4 |