FFCP PHASE1:Hg19::chr1:11919027..11919058,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4879 | |EntrezGene=4879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7940 | |HGNC=7940 | ||
|TSSclassifier=strong | |||
|UniProt=P16860 | |UniProt=P16860 | ||
|association_with_transcript=-35bp_to_NM_002521,uc001atj.2_5end | |association_with_transcript=-35bp_to_NM_002521,uc001atj.2_5end | ||
|cluster_id=chr1:11919027..11919058,- | |||
|description=CAGE_peak_2_at_NPPB_5end | |description=CAGE_peak_2_at_NPPB_5end | ||
|id=chr1:11919027..11919058,- | |id=chr1:11919027..11919058,- | ||
|ontology_enrichment_celltype=CL:0000077!2.26e-26!19;CL:0000222!1.06e-12!119;CL:0000213!6.14e-11!57;CL:0000215!6.14e-11!57;CL:0000359!8.27e-08!32;CL:0000220!1.16e-07!246;CL:0002321!1.65e-07!248 | |ontology_enrichment_celltype=CL:0000077!2.26e-26!19;CL:0000222!1.06e-12!119;CL:0000213!6.14e-11!57;CL:0000215!6.14e-11!57;CL:0000359!8.27e-08!32;CL:0000220!1.16e-07!246;CL:0002321!1.65e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000077;4.18e-35;19!CL:0002548;5.64e-09;6!CL:0000511;2.75e-07;1!CL:0002625;2.75e-07;1!CL:0000216;2.75e-07;1!CL:0002594;8.20e-07;4 | |ontology_enrichment_celltype_v019=CL:0000077;4.18e-35;19!CL:0002548;5.64e-09;6!CL:0000511;2.75e-07;1!CL:0002625;2.75e-07;1!CL:0000216;2.75e-07;1!CL:0002594;8.20e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.12e-35,19;CL:0000213,4.70e-12,58;CL:0000215,4.70e-12,58;CL:0000222,3.89e-10,121;CL:0000076,3.88e-09,63;CL:0002548,7.87e-09,6;CL:0000511,2.52e-07,1;CL:0002625,2.52e-07,1;CL:0000216,2.52e-07,1;CL:0002594,8.45e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.50e-07;1!UBERON:0010227;1.86e-07;1!UBERON:0010226;2.75e-07;1 | |ontology_enrichment_development_v019=UBERON:0004140;1.50e-07;1!UBERON:0010227;1.86e-07;1!UBERON:0010226;2.75e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.36e-12;2!DOID:178;2.04e-07;1!DOID:326;2.04e-07;1!DOID:3978;2.04e-07;1!DOID:3394;2.04e-07;1!DOID:5844;2.04e-07;1!DOID:2513;7.50e-07;1 | |ontology_enrichment_disease_v019=DOID:114;1.36e-12;2!DOID:178;2.04e-07;1!DOID:326;2.04e-07;1!DOID:3978;2.04e-07;1!DOID:3394;2.04e-07;1!DOID:5844;2.04e-07;1!DOID:2513;7.50e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:114,1.21e-12,2;DOID:178,2.10e-07,1;DOID:326,2.10e-07,1;DOID:3978,2.10e-07,1;DOID:3394,2.10e-07,1;DOID:5844,2.10e-07,1;DOID:2513,5.14e-07,1;DOID:1287,9.76e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!8.86e-15!27;UBERON:0004872!8.00e-12!84;UBERON:0003914!9.44e-12!118;UBERON:0000948!1.77e-10!24;UBERON:0005498!1.77e-10!24;UBERON:0004140!1.77e-10!24;UBERON:0009881!1.77e-10!24;UBERON:0004141!1.77e-10!24;UBERON:0003084!1.77e-10!24;UBERON:0007005!1.77e-10!24;UBERON:0004139!1.77e-10!24;UBERON:0004291!1.77e-10!24;UBERON:0001009!5.44e-10!113;UBERON:0001280!4.94e-09!4;UBERON:0004647!4.94e-09!4;UBERON:0003103!5.88e-09!69;UBERON:0001981!2.56e-08!60;UBERON:0007500!2.56e-08!60;UBERON:0004537!2.56e-08!60;UBERON:0006965!2.56e-08!60;UBERON:0004151!5.90e-08!3;UBERON:0004535!7.24e-08!110;UBERON:0000055!2.17e-07!69;UBERON:0003497!4.48e-07!3;UBERON:0003909!4.48e-07!3;UBERON:0003835!4.48e-07!3;UBERON:0001281!4.48e-07!3;UBERON:0003978!5.39e-07!3;UBERON:0009751!5.39e-07!3;UBERON:0000946!5.39e-07!3;UBERON:0002523!5.39e-07!3;UBERON:0005983!5.39e-07!3;UBERON:0002165!5.39e-07!3;UBERON:0002062!5.39e-07!3;UBERON:0007280!5.39e-07!3 | |ontology_enrichment_uberon=UBERON:0007100!8.86e-15!27;UBERON:0004872!8.00e-12!84;UBERON:0003914!9.44e-12!118;UBERON:0000948!1.77e-10!24;UBERON:0005498!1.77e-10!24;UBERON:0004140!1.77e-10!24;UBERON:0009881!1.77e-10!24;UBERON:0004141!1.77e-10!24;UBERON:0003084!1.77e-10!24;UBERON:0007005!1.77e-10!24;UBERON:0004139!1.77e-10!24;UBERON:0004291!1.77e-10!24;UBERON:0001009!5.44e-10!113;UBERON:0001280!4.94e-09!4;UBERON:0004647!4.94e-09!4;UBERON:0003103!5.88e-09!69;UBERON:0001981!2.56e-08!60;UBERON:0007500!2.56e-08!60;UBERON:0004537!2.56e-08!60;UBERON:0006965!2.56e-08!60;UBERON:0004151!5.90e-08!3;UBERON:0004535!7.24e-08!110;UBERON:0000055!2.17e-07!69;UBERON:0003497!4.48e-07!3;UBERON:0003909!4.48e-07!3;UBERON:0003835!4.48e-07!3;UBERON:0001281!4.48e-07!3;UBERON:0003978!5.39e-07!3;UBERON:0009751!5.39e-07!3;UBERON:0000946!5.39e-07!3;UBERON:0002523!5.39e-07!3;UBERON:0005983!5.39e-07!3;UBERON:0002165!5.39e-07!3;UBERON:0002062!5.39e-07!3;UBERON:0007280!5.39e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.21e-26;25!UBERON:0004151;9.17e-19;3!UBERON:0000948;9.39e-16;22!UBERON:0002081;3.38e-13;2!UBERON:0001280;2.55e-08;3!UBERON:0004647;2.55e-08;3!UBERON:0002079;1.86e-07;1!UBERON:0002134;2.04e-07;1!UBERON:0005208;2.04e-07;1!UBERON:0004145;2.04e-07;1!UBERON:0005946;2.04e-07;1!UBERON:0005965;2.04e-07;1!UBERON:0002078;2.04e-07;1!UBERON:0002084;2.75e-07;1!UBERON:0001136;2.75e-07;1!UBERON:0001343;2.75e-07;1!UBERON:0002082;2.75e-07;1!UBERON:0004910;2.75e-07;1!UBERON:0004813;2.75e-07;1!UBERON:0001282;7.50e-07;1!UBERON:0009842;7.50e-07;1!UBERON:0003704;7.50e-07;1!UBERON:0001171;7.50e-07;1!UBERON:0001172;7.50e-07;1!UBERON:0001310;8.20e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0007100;7.21e-26;25!UBERON:0004151;9.17e-19;3!UBERON:0000948;9.39e-16;22!UBERON:0002081;3.38e-13;2!UBERON:0001280;2.55e-08;3!UBERON:0004647;2.55e-08;3!UBERON:0002079;1.86e-07;1!UBERON:0002134;2.04e-07;1!UBERON:0005208;2.04e-07;1!UBERON:0004145;2.04e-07;1!UBERON:0005946;2.04e-07;1!UBERON:0005965;2.04e-07;1!UBERON:0002078;2.04e-07;1!UBERON:0002084;2.75e-07;1!UBERON:0001136;2.75e-07;1!UBERON:0001343;2.75e-07;1!UBERON:0002082;2.75e-07;1!UBERON:0004910;2.75e-07;1!UBERON:0004813;2.75e-07;1!UBERON:0001282;7.50e-07;1!UBERON:0009842;7.50e-07;1!UBERON:0003704;7.50e-07;1!UBERON:0001171;7.50e-07;1!UBERON:0001172;7.50e-07;1!UBERON:0001310;8.20e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.83e-24,27;UBERON:0004151,8.65e-19,3;UBERON:0000948,3.03e-14,24;UBERON:0005498,3.03e-14,24;UBERON:0004140,3.03e-14,24;UBERON:0009881,3.03e-14,24;UBERON:0004141,3.03e-14,24;UBERON:0003084,3.03e-14,24;UBERON:0007005,3.03e-14,24;UBERON:0004139,3.03e-14,24;UBERON:0004291,3.03e-14,24;UBERON:0002081,3.28e-13,2;UBERON:0010227,3.28e-13,2;UBERON:0004872,1.15e-10,83;UBERON:0001009,1.05e-09,112;UBERON:0001280,2.19e-08,3;UBERON:0004647,2.19e-08,3;UBERON:0005171,2.19e-08,3;UBERON:0003103,3.45e-08,68;UBERON:0003914,6.18e-08,117;UBERON:0002079,1.86e-07,1;UBERON:0002134,1.98e-07,1;UBERON:0005208,1.98e-07,1;UBERON:0005946,1.98e-07,1;UBERON:0005965,1.98e-07,1;UBERON:0002078,1.98e-07,1;UBERON:0001136,2.52e-07,1;UBERON:0001343,2.52e-07,1;UBERON:0004910,2.52e-07,1;UBERON:0005154,2.52e-07,1;UBERON:0005295,2.52e-07,1;UBERON:0004813,2.52e-07,1;UBERON:0005297,2.52e-07,1;UBERON:0005294,2.52e-07,1;UBERON:0010141,2.52e-07,1;UBERON:0005891,2.52e-07,1;UBERON:0002084,2.67e-07,1;UBERON:0002082,2.67e-07,1;UBERON:0010226,2.67e-07,1;UBERON:0001282,5.45e-07,1;UBERON:0009842,5.45e-07,1;UBERON:0003704,5.45e-07,1;UBERON:0001171,5.45e-07,1;UBERON:0001172,5.45e-07,1;UBERON:0001310,8.45e-07,4 | |||
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| ||
|short_description=p2@NPPB | |short_description=p2@NPPB | ||
}} | }} |
Latest revision as of 11:22, 16 September 2015
Short description: | p2@NPPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NPPB_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_NM_002521, uc001atj.2_5end |
EntrezGene: | NPPB |
HGNC: | 7940 |
UniProt: | P16860 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.12e-35 | 19 |
lining cell | 4.70e-12 | 58 |
barrier cell | 4.70e-12 | 58 |
mesodermal cell | 3.89e-10 | 121 |
squamous epithelial cell | 3.88e-09 | 63 |
cardiac fibroblast | 7.87e-09 | 6 |
androgen binding protein secreting cell | 2.52e-07 | 1 |
seminiferous tubule epithelial cell | 2.52e-07 | 1 |
Sertoli cell | 2.52e-07 | 1 |
smooth muscle cell of the umbilical artery | 8.45e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.21e-12 | 2 |
vascular disease | 2.10e-07 | 1 |
ischemia | 2.10e-07 | 1 |
extrinsic cardiomyopathy | 2.10e-07 | 1 |
myocardial ischemia | 2.10e-07 | 1 |
myocardial infarction | 2.10e-07 | 1 |
basal cell carcinoma | 5.14e-07 | 1 |
cardiovascular system disease | 9.76e-07 | 4 |