FFCP PHASE1:Hg19::chr5:153857778..153857794,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9421 | |EntrezGene=9421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4807 | |HGNC=4807 | ||
|TSSclassifier=strong | |||
|UniProt=O96004 | |UniProt=O96004 | ||
|association_with_transcript=29bp_to_ENST00000231121,NM_004821,uc003lvn.2_5end | |association_with_transcript=29bp_to_ENST00000231121,NM_004821,uc003lvn.2_5end | ||
|cluster_id=chr5:153857778..153857794,- | |||
|coexpression_cluster_id=C360 | |coexpression_cluster_id=C360 | ||
|description=CAGE_peak_1_at_HAND1_5end | |description=CAGE_peak_1_at_HAND1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!6.18e-12!7;CL:0000586!6.18e-12!7;CL:0002322!6.49e-10!5;CL:0000349!1.24e-07!3;CL:0002577!1.24e-07!3 | |ontology_enrichment_celltype=CL:0000039!6.18e-12!7;CL:0000586!6.18e-12!7;CL:0002322!6.49e-10!5;CL:0000349!1.24e-07!3;CL:0002577!1.24e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.31e-20;19!CL:0002577;6.85e-12;3!CL:0002322;1.10e-10;5!CL:0002321;5.30e-10;15!CL:0002536;2.22e-08;2!CL:0002537;3.86e-07;5!CL:0000333;9.20e-07;5 | |ontology_enrichment_celltype_v019=CL:0000349;2.31e-20;19!CL:0002577;6.85e-12;3!CL:0002322;1.10e-10;5!CL:0002321;5.30e-10;15!CL:0002536;2.22e-08;2!CL:0002537;3.86e-07;5!CL:0000333;9.20e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.27e-20,19;CL:0002577,6.85e-12,3;CL:0002322,1.13e-10,5;CL:0002536,2.22e-08,2;CL:0002537,3.86e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3095!6.89e-14!22;DOID:2994!6.89e-14!22 | |ontology_enrichment_disease=DOID:3095!6.89e-14!22;DOID:2994!6.89e-14!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.60e-08;22!DOID:2994;1.60e-08;22!DOID:114;9.43e-08;2 | |ontology_enrichment_disease_v019=DOID:3095;1.60e-08;22!DOID:2994;1.60e-08;22!DOID:114;9.43e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.69e-08,22;DOID:2994,1.69e-08,22;DOID:114,9.43e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!9.33e-17!14;UBERON:0000158!9.33e-17!14;UBERON:0000478!5.54e-14!24;UBERON:0003124!1.57e-10!7;UBERON:0001987!3.15e-09!4;UBERON:0004340!3.15e-09!4;UBERON:0000305!5.79e-08!7;UBERON:0004871!6.99e-07!8;UBERON:0000013!9.28e-07!5;UBERON:0002410!9.28e-07!5 | |ontology_enrichment_uberon=UBERON:0005631!9.33e-17!14;UBERON:0000158!9.33e-17!14;UBERON:0000478!5.54e-14!24;UBERON:0003124!1.57e-10!7;UBERON:0001987!3.15e-09!4;UBERON:0004340!3.15e-09!4;UBERON:0000305!5.79e-08!7;UBERON:0004871!6.99e-07!8;UBERON:0000013!9.28e-07!5;UBERON:0002410!9.28e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.70e-21;24!UBERON:0001987;1.41e-14;4!UBERON:0000160;1.45e-13;17!UBERON:0000305;5.52e-13;7!UBERON:0005409;1.46e-12;22!UBERON:0005631;1.58e-12;10!UBERON:0000158;1.58e-12;10!UBERON:0000059;1.66e-10;11!UBERON:0004921;3.92e-07;33!UBERON:0000013;9.20e-07;5!UBERON:0002410;9.20e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000478;1.70e-21;24!UBERON:0001987;1.41e-14;4!UBERON:0000160;1.45e-13;17!UBERON:0000305;5.52e-13;7!UBERON:0005409;1.46e-12;22!UBERON:0005631;1.58e-12;10!UBERON:0000158;1.58e-12;10!UBERON:0000059;1.66e-10;11!UBERON:0004921;3.92e-07;33!UBERON:0000013;9.20e-07;5!UBERON:0002410;9.20e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.67e-24,14;UBERON:0000158,7.67e-24,14;UBERON:0000478,1.61e-21,24;UBERON:0001987,1.34e-14,4;UBERON:0004340,1.34e-14,4;UBERON:0000160,1.40e-13,17;UBERON:0000305,5.52e-13,7;UBERON:0003124,1.63e-12,7;UBERON:0004871,2.62e-11,8;UBERON:0005409,6.69e-11,25;UBERON:0000059,1.65e-10,11;UBERON:0000013,9.66e-07,5;UBERON:0002410,9.66e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.783556884599516,0,0,287.031962979046,129.245819331942,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,9.59859964559671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0,4.37971383272372,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.609868530647977,2.25300606146525,62.6285352066704,5.39037486079926,7.56962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68194568626309,1.64648067356154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50119364741774,0,0,0,0,0,0,0,24.8335371102012,0,2.21243002250044,0,0,0,0,0,0,826.628887333949,156.449313139867,831.573306656621,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72093622644862,0.491245205065606,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,79.2631689329131,411.89001231487,128.700334179578,0,0,0,0,7.81164010073576,0,9.11736921252787,0,0,0,0,0,0,0,4.73488347057281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0.23056390438806,3.41079048757134,0.760531603454056,15.6310568268641,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8862863458841,20.9644427872914,6.11030144933625,0,0,0,0,0,0,0,0,0,0,10.8891644443797,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56441106187842,0,4.4825128895264,3.79638258206047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,7.33313356837388,0,8.18683902045863,17.1690419254628,17.6305451379079,23.0439310629471,0,0,0,0,0,0.0984274815147488,0,0,0,17.039833737292,1.2378549293751,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0,0,15.2281153184049,66.6183568655445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7390523433299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.02883762618528,0,0.530067437837643,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,11.1973906805935,80.5734539213006,3.12691953050377,0.471797825567689,155.07768623266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72549954683083,0,0,0,0,0,0,2.8257513426185,0,19.3387792686514,4.56579360254748,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0.11294608203896,0.109940516745429,0,18.3674496296908,12.8950140697335,0,3.43207650455468,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,13.8838974730002,0,0,7.93540260773101,0,0,0,0.883164973845552,51.3548188229369,332.836962157045,4.69148616813116,0.26721740526556,4.13527047906802,0.250707539292375,0,0,0,0,0.213233981900981,0,0.516711278688049,0.248298857183432,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0.665756774185513,0.402547587182052,0 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|phase1_expression=0,0,0,0,0,0,0,0,0.783556884599516,0,0,287.031962979046,129.245819331942,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,9.59859964559671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0,4.37971383272372,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.609868530647977,2.25300606146525,62.6285352066704,5.39037486079926,7.56962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68194568626309,1.64648067356154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50119364741774,0,0,0,0,0,0,0,24.8335371102012,0,2.21243002250044,0,0,0,0,0,0,826.628887333949,156.449313139867,831.573306656621,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72093622644862,0.491245205065606,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,79.2631689329131,411.89001231487,128.700334179578,0,0,0,0,7.81164010073576,0,9.11736921252787,0,0,0,0,0,0,0,4.73488347057281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0.23056390438806,3.41079048757134,0.760531603454056,15.6310568268641,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8862863458841,20.9644427872914,6.11030144933625,0,0,0,0,0,0,0,0,0,0,10.8891644443797,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56441106187842,0,4.4825128895264,3.79638258206047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,7.33313356837388,0,8.18683902045863,17.1690419254628,17.6305451379079,23.0439310629471,0,0,0,0,0,0.0984274815147488,0,0,0,17.039833737292,1.2378549293751,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0,0,15.2281153184049,66.6183568655445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7390523433299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.02883762618528,0,0.530067437837643,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,11.1973906805935,80.5734539213006,3.12691953050377,0.471797825567689,155.07768623266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72549954683083,0,0,0,0,0,0,2.8257513426185,0,19.3387792686514,4.56579360254748,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0.11294608203896,0.109940516745429,0,18.3674496296908,12.8950140697335,0,3.43207650455468,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,13.8838974730002,0,0,7.93540260773101,0,0,0,0.883164973845552,51.3548188229369,332.836962157045,4.69148616813116,0.26721740526556,4.13527047906802,0.250707539292375,0,0,0,0,0.213233981900981,0,0.516711278688049,0.248298857183432,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0.665756774185513,0.402547587182052,0 | ||
|short_description=p1@HAND1 | |short_description=p1@HAND1 | ||
}} | }} |
Latest revision as of 11:57, 16 September 2015
Short description: | p1@HAND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HAND1_5end |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | 29bp_to_ENST00000231121, NM_004821, uc003lvn.2_5end |
EntrezGene: | HAND1 |
HGNC: | 4807 |
UniProt: | O96004 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.27e-20 | 19 |
placental epithelial cell | 6.85e-12 | 3 |
embryonic stem cell | 1.13e-10 | 5 |
amniotic epithelial cell | 2.22e-08 | 2 |
amnion mesenchymal stem cell | 3.86e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.67e-24 | 14 |
membranous layer | 7.67e-24 | 14 |
extraembryonic structure | 1.61e-21 | 24 |
placenta | 1.34e-14 | 4 |
allantois | 1.34e-14 | 4 |
intestine | 1.40e-13 | 17 |
amnion | 5.52e-13 | 7 |
chorion | 1.63e-12 | 7 |
somatic layer of lateral plate mesoderm | 2.62e-11 | 8 |
gastrointestinal system | 6.69e-11 | 25 |
large intestine | 1.65e-10 | 11 |
sympathetic nervous system | 9.66e-07 | 5 |
autonomic nervous system | 9.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.69e-08 | 22 |
germ cell cancer | 1.69e-08 | 22 |
heart disease | 9.43e-08 | 2 |