FFCP PHASE1:Hg19::chr1:11994715..11994833,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5351 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9081 | |||
|TSSclassifier=strong | |||
|UniProt=Q02809,Q5JXB9,B4DR87,E7EWK8,Q5JXB7,Q5JXB8 | |||
|association_with_transcript=0bp_to_ENST00000196061,ENST00000358133,ENST00000376369,ENST00000414311,ENST00000429000,ENST00000449038,NM_000302,uc001atm.2,uc010obb.1_5end | |||
|cluster_id=chr1:11994715..11994833,+ | |||
|coexpression_cluster_id=C750 | |||
|description=CAGE_peak_1_at_PLOD1_5end | |||
|id=chr1:11994715..11994833,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.94e-37!180;CL:0000222!1.35e-26!119;CL:0000183!1.32e-21!59;CL:0000680!4.12e-21!57;CL:0000056!4.12e-21!57;CL:0000355!4.12e-21!57;CL:0002371!4.20e-20!591;CL:0000187!1.07e-19!54;CL:0000220!2.79e-19!246;CL:0002321!6.72e-19!248;CL:0000192!1.93e-18!42;CL:0000514!1.93e-18!42;CL:0000144!4.46e-18!625;CL:0000057!1.72e-17!75;CL:0000359!2.20e-16!32;CL:0000548!7.60e-16!679;CL:0000004!7.60e-16!679;CL:0000255!7.60e-16!679;CL:0000393!2.37e-15!60;CL:0000211!2.37e-15!60;CL:0000012!9.91e-15!682;CL:0000115!7.72e-10!35;CL:0002078!3.34e-09!44;CL:0002494!5.31e-08!16;CL:0002139!1.33e-07!24;CL:0000213!2.77e-07!57;CL:0000215!2.77e-07!57;CL:0002620!5.37e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.14e-15;32!CL:0000192;6.63e-13;43!CL:0000187;1.50e-10;55!CL:0000134;1.92e-10;55!CL:0000115;7.44e-09;36!CL:0000048;1.10e-08;58!CL:0000723;1.25e-08;61!CL:0002494;5.31e-08;16!CL:0000057;9.48e-08;73!CL:0000393;9.60e-08;61!CL:0000211;9.60e-08;61!CL:0002139;1.34e-07;24!CL:0002320;1.92e-07;188!CL:0002620;5.40e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.81e-27,121;CL:0000680,1.03e-20,58;CL:0000056,1.03e-20,58;CL:0000355,1.03e-20,58;CL:0000187,2.62e-19,55;CL:0002321,4.00e-19,250;CL:0000057,4.57e-18,76;CL:0000192,5.58e-18,43;CL:0000514,5.58e-18,43;CL:0000359,2.20e-16,32;CL:0000393,4.51e-15,61;CL:0000211,4.51e-15,61;CL:0000115,3.49e-10,36;CL:0002078,1.57e-09,45;CL:0002494,5.31e-08,16;CL:0002139,1.33e-07,24;CL:0000213,1.43e-07,58;CL:0000215,1.43e-07,58;CL:0002620,5.37e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;6.63e-13;43!CL:0000355;7.60e-11;58!CL:0000222;3.07e-07;121 | |||
|ontology_enrichment_disease=DOID:2394!1.03e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.02e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.03e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!2.07e-27!118;UBERON:0002049!3.81e-27!79;UBERON:0007798!3.81e-27!79;UBERON:0004872!2.08e-26!84;UBERON:0000055!1.75e-24!69;UBERON:0001981!9.92e-23!60;UBERON:0007500!9.92e-23!60;UBERON:0004537!9.92e-23!60;UBERON:0006965!9.92e-23!60;UBERON:0004535!2.35e-22!110;UBERON:0005256!2.43e-22!143;UBERON:0000490!3.32e-22!138;UBERON:0001009!5.09e-22!113;UBERON:0001637!3.97e-21!42;UBERON:0003509!3.97e-21!42;UBERON:0004572!3.97e-21!42;UBERON:0004290!5.52e-21!70;UBERON:0000914!6.62e-21!83;UBERON:0002329!6.62e-21!83;UBERON:0003077!6.62e-21!83;UBERON:0003059!6.62e-21!83;UBERON:0007282!6.62e-21!83;UBERON:0009618!6.62e-21!83;UBERON:0007285!6.62e-21!83;UBERON:0001134!8.33e-20!61;UBERON:0002036!8.33e-20!61;UBERON:0003082!8.33e-20!61;UBERON:0000486!1.42e-19!82;UBERON:0002385!6.83e-19!63;UBERON:0001015!6.83e-19!63;UBERON:0000383!6.83e-19!63;UBERON:0004573!1.25e-16!33;UBERON:0004571!1.25e-16!33;UBERON:0002100!5.52e-16!216;UBERON:0000119!3.16e-13!312;UBERON:0000468!9.67e-13!659;UBERON:0000483!1.10e-12!309;UBERON:0003104!2.39e-12!238;UBERON:0009142!2.39e-12!238;UBERON:0000926!1.29e-11!448;UBERON:0004120!1.29e-11!448;UBERON:0006603!1.29e-11!448;UBERON:0000475!4.30e-11!365;UBERON:0000480!1.11e-10!626;UBERON:0000467!1.22e-10!625;UBERON:0000947!5.48e-10!21;UBERON:0010191!5.48e-10!21;UBERON:0000477!7.49e-10!286;UBERON:0000481!2.45e-09!347;UBERON:0004111!3.80e-08!241;UBERON:0000025!2.09e-07!194;UBERON:0002199!4.92e-07!45;UBERON:0002416!4.92e-07!45;UBERON:0000948!5.73e-07!24;UBERON:0005498!5.73e-07!24;UBERON:0004140!5.73e-07!24;UBERON:0009881!5.73e-07!24;UBERON:0004141!5.73e-07!24;UBERON:0003084!5.73e-07!24;UBERON:0007005!5.73e-07!24;UBERON:0004139!5.73e-07!24;UBERON:0004291!5.73e-07!24;UBERON:0000487!8.94e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.62e-16;42!UBERON:0003509;9.62e-16;42!UBERON:0004572;9.62e-16;42!UBERON:0004573;2.76e-15;33!UBERON:0004571;2.76e-15;33!UBERON:0007500;5.65e-13;56!UBERON:0001981;5.65e-13;56!UBERON:0004537;5.65e-13;56!UBERON:0000055;6.20e-12;65!UBERON:0002049;9.01e-11;75!UBERON:0007798;9.01e-11;75!UBERON:0003914;1.08e-10;74!UBERON:0000947;5.50e-10;21!UBERON:0010191;5.50e-10;21!UBERON:0002384;7.56e-07;198!UBERON:0001009;8.13e-07;112!UBERON:0000487;9.32e-07;22 | |||
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| |||
|short_description=p1@PLOD1 | |||
}} |
Latest revision as of 11:58, 16 September 2015
Short description: | p1@PLOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLOD1_5end |
Coexpression cluster: | C750_Smooth_Mesenchymal_Fibroblast_Hepatic_Chondrocyte_Lens_tenocyte |
Association with transcript: | 0bp_to_ENST00000196061, ENST00000358133, ENST00000376369, ENST00000414311, ENST00000429000, ENST00000449038, NM_000302, uc001atm.2, uc010obb.1_5end |
EntrezGene: | PLOD1 |
HGNC: | 9081 |
UniProt: | Q02809Q5JXB9B4DR87E7EWK8Q5JXB7Q5JXB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.81e-27 | 121 |
muscle precursor cell | 1.03e-20 | 58 |
myoblast | 1.03e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.03e-20 | 58 |
muscle cell | 2.62e-19 | 55 |
embryonic cell | 4.00e-19 | 250 |
fibroblast | 4.57e-18 | 76 |
smooth muscle cell | 5.58e-18 | 43 |
smooth muscle myoblast | 5.58e-18 | 43 |
vascular associated smooth muscle cell | 2.20e-16 | 32 |
electrically responsive cell | 4.51e-15 | 61 |
electrically active cell | 4.51e-15 | 61 |
endothelial cell | 3.49e-10 | 36 |
meso-epithelial cell | 1.57e-09 | 45 |
cardiocyte | 5.31e-08 | 16 |
endothelial cell of vascular tree | 1.33e-07 | 24 |
lining cell | 1.43e-07 | 58 |
barrier cell | 1.43e-07 | 58 |
skin fibroblast | 5.37e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.03e-08 | 14 |