FFCP PHASE1:Hg19::chr19:17530888..17530938,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93343 | |EntrezGene=93343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25153 | |HGNC=25153 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJW8,Q96EY5 | |UniProt=E9PJW8,Q96EY5 | ||
|association_with_transcript=0bp_to_ENST00000526234,ENST00000528515,ENST00000543795,NM_138401,uc002ngn.1,uc002ngo.1_5end | |association_with_transcript=0bp_to_ENST00000526234,ENST00000528515,ENST00000543795,NM_138401,uc002ngn.1,uc002ngo.1_5end | ||
|cluster_id=chr19:17530888..17530938,+ | |||
|coexpression_cluster_id=C895 | |||
|description=CAGE_peak_2_at_FAM125A_5end | |description=CAGE_peak_2_at_FAM125A_5end | ||
|id=chr19:17530888..17530938,+ | |id=chr19:17530888..17530938,+ | ||
|ontology_enrichment_celltype=CL:0002321!3.34e-21!248;CL:0000055!8.49e-21!180;CL:0000220!1.12e-20!246;CL:0000222!2.15e-15!119;CL:0000548!3.64e-14!679;CL:0000004!3.64e-14!679;CL:0000255!3.64e-14!679;CL:0000012!5.26e-14!682;CL:0000183!2.02e-12!59;CL:0000393!1.65e-11!60;CL:0000211!1.65e-11!60;CL:0000066!2.76e-11!254;CL:0000144!1.52e-10!625;CL:0002371!4.55e-10!591;CL:0000187!4.95e-10!54;CL:0000680!6.22e-10!57;CL:0000056!6.22e-10!57;CL:0000355!6.22e-10!57;CL:0000192!5.20e-09!42;CL:0000514!5.20e-09!42;CL:0002078!5.72e-09!44;CL:0000115!1.82e-08!35;CL:0000003!2.19e-07!722;CL:0000221!3.35e-07!71;CL:0000133!5.81e-07!59;CL:0000213!9.17e-07!57;CL:0000215!9.17e-07!57 | |ontology_enrichment_celltype=CL:0002321!3.34e-21!248;CL:0000055!8.49e-21!180;CL:0000220!1.12e-20!246;CL:0000222!2.15e-15!119;CL:0000548!3.64e-14!679;CL:0000004!3.64e-14!679;CL:0000255!3.64e-14!679;CL:0000012!5.26e-14!682;CL:0000183!2.02e-12!59;CL:0000393!1.65e-11!60;CL:0000211!1.65e-11!60;CL:0000066!2.76e-11!254;CL:0000144!1.52e-10!625;CL:0002371!4.55e-10!591;CL:0000187!4.95e-10!54;CL:0000680!6.22e-10!57;CL:0000056!6.22e-10!57;CL:0000355!6.22e-10!57;CL:0000192!5.20e-09!42;CL:0000514!5.20e-09!42;CL:0002078!5.72e-09!44;CL:0000115!1.82e-08!35;CL:0000003!2.19e-07!722;CL:0000221!3.35e-07!71;CL:0000133!5.81e-07!59;CL:0000213!9.17e-07!57;CL:0000215!9.17e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.72e-07;36!CL:0000192;3.99e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.82e-22,250;CL:0000222,6.86e-16,121;CL:0000393,1.17e-11,61;CL:0000211,1.17e-11,61;CL:0000066,3.79e-11,253;CL:0000187,3.52e-10,55;CL:0000680,4.41e-10,58;CL:0000056,4.41e-10,58;CL:0000355,4.41e-10,58;CL:0002078,2.63e-09,45;CL:0000192,3.74e-09,43;CL:0000514,3.74e-09,43;CL:0000115,8.21e-09,36;CL:0000221,1.47e-07,72;CL:0000213,4.74e-07,58;CL:0000215,4.74e-07,58;CL:0000133,5.81e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000514;3.99e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.06e-13!79;UBERON:0007798!4.06e-13!79;UBERON:0003104!1.80e-11!238;UBERON:0009142!1.80e-11!238;UBERON:0000486!8.92e-11!82;UBERON:0000055!1.40e-10!69;UBERON:0004290!1.94e-10!70;UBERON:0000490!9.42e-10!138;UBERON:0000914!1.09e-09!83;UBERON:0002329!1.09e-09!83;UBERON:0003077!1.09e-09!83;UBERON:0003059!1.09e-09!83;UBERON:0007282!1.09e-09!83;UBERON:0009618!1.09e-09!83;UBERON:0007285!1.09e-09!83;UBERON:0004872!1.20e-09!84;UBERON:0003914!3.11e-09!118;UBERON:0001981!4.11e-09!60;UBERON:0007500!4.11e-09!60;UBERON:0004537!4.11e-09!60;UBERON:0006965!4.11e-09!60;UBERON:0005256!5.22e-09!143;UBERON:0001134!7.71e-09!61;UBERON:0002036!7.71e-09!61;UBERON:0003082!7.71e-09!61;UBERON:0000481!2.36e-08!347;UBERON:0002100!2.77e-08!216;UBERON:0002385!2.82e-08!63;UBERON:0001015!2.82e-08!63;UBERON:0000383!2.82e-08!63;UBERON:0004535!1.07e-07!110;UBERON:0001637!8.89e-07!42;UBERON:0003509!8.89e-07!42;UBERON:0004572!8.89e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;3.07e-07;74!UBERON:0002049;8.66e-07;75!UBERON:0007798;8.66e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.51e-13,78;UBERON:0002049,2.68e-13,78;UBERON:0007798,2.68e-13,78;UBERON:0000490,2.14e-11,148;UBERON:0000486,6.29e-11,83;UBERON:0000055,9.59e-11,68;UBERON:0002329,1.37e-10,71;UBERON:0003059,1.37e-10,71;UBERON:0007282,1.37e-10,71;UBERON:0004290,1.37e-10,71;UBERON:0009618,1.37e-10,71;UBERON:0003104,1.50e-10,160;UBERON:0009142,1.50e-10,160;UBERON:0007524,2.09e-10,73;UBERON:0003077,4.07e-10,72;UBERON:0007285,4.07e-10,72;UBERON:0004872,9.01e-10,83;UBERON:0007500,2.83e-09,59;UBERON:0001981,2.83e-09,59;UBERON:0004537,2.83e-09,59;UBERON:0006965,2.83e-09,59;UBERON:0003914,4.34e-09,117;UBERON:0001134,5.49e-09,62;UBERON:0002036,5.49e-09,62;UBERON:0003082,5.49e-09,62;UBERON:0002100,1.25e-08,199;UBERON:0002385,2.01e-08,64;UBERON:0001015,2.01e-08,64;UBERON:0000383,2.01e-08,64;UBERON:0005256,4.79e-08,122;UBERON:0004535,8.97e-08,109;UBERON:0001637,8.89e-07,42;UBERON:0003509,8.89e-07,42;UBERON:0004572,8.89e-07,42;UBERON:0001009,9.48e-07,112 | |||
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| ||
|short_description=p2@FAM125A | |short_description=p2@FAM125A | ||
}} | }} |
Latest revision as of 12:09, 16 September 2015
Short description: | p2@FAM125A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM125A_5end |
Coexpression cluster: | C895_Mesenchymal_Renal_Alveolar_Fibroblast_Pericytes_Trabecular_Osteoblast |
Association with transcript: | 0bp_to_ENST00000526234, ENST00000528515, ENST00000543795, NM_138401, uc002ngn.1, uc002ngo.1_5end |
EntrezGene: | FAM125A |
HGNC: | 25153 |
UniProt: | E9PJW8Q96EY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.82e-22 | 250 |
mesodermal cell | 6.86e-16 | 121 |
electrically responsive cell | 1.17e-11 | 61 |
electrically active cell | 1.17e-11 | 61 |
epithelial cell | 3.79e-11 | 253 |
muscle cell | 3.52e-10 | 55 |
muscle precursor cell | 4.41e-10 | 58 |
myoblast | 4.41e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.41e-10 | 58 |
meso-epithelial cell | 2.63e-09 | 45 |
smooth muscle cell | 3.74e-09 | 43 |
smooth muscle myoblast | 3.74e-09 | 43 |
endothelial cell | 8.21e-09 | 36 |
ectodermal cell | 1.47e-07 | 72 |
lining cell | 4.74e-07 | 58 |
barrier cell | 4.74e-07 | 58 |
neurectodermal cell | 5.81e-07 | 59 |