FFCP PHASE1:Hg19::chr11:124746692..124746727,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64221 | |EntrezGene=64221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13433 | |HGNC=13433 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000526551,ENST00000528068,ENST00000530647,ENST00000531119,ENST00000532472_5end | |association_with_transcript=0bp_to_ENST00000526551,ENST00000528068,ENST00000530647,ENST00000531119,ENST00000532472_5end | ||
|cluster_id=chr11:124746692..124746727,+ | |||
|description=CAGE_peak_2_at_ROBO3_5end | |description=CAGE_peak_2_at_ROBO3_5end | ||
|id=chr11:124746692..124746727,+ | |id=chr11:124746692..124746727,+ | ||
|ontology_enrichment_celltype=CL:0000220!1.56e-09!246;CL:0002321!2.64e-09!248;CL:0000055!8.30e-09!180 | |ontology_enrichment_celltype=CL:0000220!1.56e-09!246;CL:0002321!2.64e-09!248;CL:0000055!8.30e-09!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.89e-09,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.73e-16!312;UBERON:0000483!1.29e-15!309;UBERON:0000475!5.74e-14!365;UBERON:0000481!8.29e-12!347;UBERON:0004121!5.66e-11!169;UBERON:0000924!9.85e-11!173;UBERON:0006601!9.85e-11!173;UBERON:0003075!2.82e-10!86;UBERON:0007284!2.82e-10!86;UBERON:0002346!7.72e-10!90;UBERON:0000033!1.37e-09!123;UBERON:0000153!8.01e-09!129;UBERON:0007811!8.01e-09!129;UBERON:0000477!1.67e-08!286;UBERON:0004111!6.38e-08!241;UBERON:0000468!9.66e-08!659;UBERON:0003056!1.14e-07!61;UBERON:0005085!1.60e-07!29;UBERON:0001801!3.71e-07!14;UBERON:0000923!5.18e-07!604;UBERON:0005291!5.18e-07!604;UBERON:0006598!5.18e-07!604;UBERON:0002532!5.18e-07!604;UBERON:0002050!5.63e-07!605;UBERON:0005423!5.63e-07!605;UBERON:0000922!5.73e-07!612;UBERON:0000467!8.70e-07!625 | |ontology_enrichment_uberon=UBERON:0000119!1.73e-16!312;UBERON:0000483!1.29e-15!309;UBERON:0000475!5.74e-14!365;UBERON:0000481!8.29e-12!347;UBERON:0004121!5.66e-11!169;UBERON:0000924!9.85e-11!173;UBERON:0006601!9.85e-11!173;UBERON:0003075!2.82e-10!86;UBERON:0007284!2.82e-10!86;UBERON:0002346!7.72e-10!90;UBERON:0000033!1.37e-09!123;UBERON:0000153!8.01e-09!129;UBERON:0007811!8.01e-09!129;UBERON:0000477!1.67e-08!286;UBERON:0004111!6.38e-08!241;UBERON:0000468!9.66e-08!659;UBERON:0003056!1.14e-07!61;UBERON:0005085!1.60e-07!29;UBERON:0001801!3.71e-07!14;UBERON:0000923!5.18e-07!604;UBERON:0005291!5.18e-07!604;UBERON:0006598!5.18e-07!604;UBERON:0002532!5.18e-07!604;UBERON:0002050!5.63e-07!605;UBERON:0005423!5.63e-07!605;UBERON:0000922!5.73e-07!612;UBERON:0000467!8.70e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0001801;1.78e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.03e-14,309;UBERON:0000483,7.52e-14,306;UBERON:0010371,5.27e-12,104;UBERON:0010314,1.87e-11,132;UBERON:0004121,1.82e-10,171;UBERON:0000924,1.82e-10,171;UBERON:0006601,1.82e-10,171;UBERON:0003075,7.77e-10,82;UBERON:0007284,7.77e-10,82;UBERON:0002346,3.44e-09,86;UBERON:0001801,1.17e-07,14;UBERON:0004111,3.27e-07,240;UBERON:0005085,6.47e-07,31 | |||
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| ||
|short_description=p2@ROBO3 | |short_description=p2@ROBO3 | ||
}} | }} |
Latest revision as of 12:12, 16 September 2015
Short description: | p2@ROBO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ROBO3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526551, ENST00000528068, ENST00000530647, ENST00000531119, ENST00000532472_5end |
EntrezGene: | ROBO3 |
HGNC: | 13433 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.89e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.03e-14 | 309 |
epithelium | 7.52e-14 | 306 |
ecto-epithelium | 5.27e-12 | 104 |
structure with developmental contribution from neural crest | 1.87e-11 | 132 |
ectoderm-derived structure | 1.82e-10 | 171 |
ectoderm | 1.82e-10 | 171 |
presumptive ectoderm | 1.82e-10 | 171 |
neural plate | 7.77e-10 | 82 |
presumptive neural plate | 7.77e-10 | 82 |
neurectoderm | 3.44e-09 | 86 |
anterior segment of eyeball | 1.17e-07 | 14 |
anatomical conduit | 3.27e-07 | 240 |
ectodermal placode | 6.47e-07 | 31 |