FFCP PHASE1:Hg19::chr1:235324482..235324489,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23029 | |EntrezGene=23029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28965 | |HGNC=28965 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468751_5end | |association_with_transcript=0bp_to_ENST00000468751_5end | ||
|cluster_id=chr1:235324482..235324489,- | |||
|description=CAGE_peak_2_at_RBM34_5end | |description=CAGE_peak_2_at_RBM34_5end | ||
|id=chr1:235324482..235324489,- | |id=chr1:235324482..235324489,- | ||
|ontology_enrichment_celltype=CL:0000012!5.21e-10!682;CL:0000548!1.05e-09!679;CL:0000004!1.05e-09!679;CL:0000255!1.05e-09!679;CL:0000063!2.73e-09!578;CL:0000003!6.33e-08!722;CL:0000066!4.37e-07!254 | |ontology_enrichment_celltype=CL:0000012!5.21e-10!682;CL:0000548!1.05e-09!679;CL:0000004!1.05e-09!679;CL:0000255!1.05e-09!679;CL:0000063!2.73e-09!578;CL:0000003!6.33e-08!722;CL:0000066!4.37e-07!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.65e-08;29 | |ontology_enrichment_development_v019=UBERON:0008947;5.65e-08;29 | ||
|ontology_enrichment_disease=DOID:162!1.07e-15!235;DOID:14566!3.86e-15!239;DOID:0050687!2.21e-10!143;DOID:305!6.86e-10!106 | |ontology_enrichment_disease=DOID:162!1.07e-15!235;DOID:14566!3.86e-15!239;DOID:0050687!2.21e-10!143;DOID:305!6.86e-10!106 | ||
|ontology_enrichment_disease_v019=DOID:169;6.70e-07;6 | |ontology_enrichment_disease_v019=DOID:169;6.70e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:162,4.37e-08,235;DOID:14566,8.71e-08,239;DOID:0050687,4.55e-07,143;DOID:169,5.85e-07,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.04e-07;9!UBERON:0001557;2.04e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.04e-07;9!UBERON:0001557;2.04e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.58e-07,9 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,1.0007329835313,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.251085279189606,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0.154816123316076,0.919421224478927,0,0,0.154934401160603,0.142169232487422,0.293600439334847,0,0.401088894940283,0.217010870715852,0.223915474239924,0,0.257575567634187,0.872389432677388,0.377875943688809,0.727752183563449,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.512321413058201,0.47296445977717,0.689491361473237,0.645484683583826,0,0.188242339542605,0.272906150057846,0.674170453335254,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,0,0.75374599577023,0,1.3031330682307,0,0.368277635987565,0.632924774881769,0.422510572623884,0.212604299965044,0.419317291016752,0.112328631146495,0.300353785683013,0.16072558669708,0,0,0.182664153764634,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0.821127996921047,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0.175669571386252,0,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0.476981248610684,0,0,0.198762407366705,0,0,0,2.09749718104953,0.825354125820202,0.835979866147242,0.258416759169329,0.35576626268671,0.66944122552934,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0.81014194788176,0.357198913136319,0,0.450445921933289,0,0,0.732806975721629,0,0,0,0.496971951695318,0.506522046658319,0.662045904066094,0,0.354668382198357,0,3.20246987189115,0.24666754841716,0.622422070799533,0,0.653847612453835,0,0,0,0,1.1409436430889,0.298897361103602,0.23486899728753,0,0.140450806702248,0,0.368502951935304,0,0,0.494533858557114,0,0,0.336672227908132,0,0.831192346452549,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.487185025805993,0,0.368199594569197,0.161646056818812,0.355009592516614,0.503760491138201,0.847802961552438,1.15956511897978,0.818238361772504,1.72082757233402,0.121973706129595,0.795178609928912,0.69716365721711,0.207322110030741,0.756962552626885,0,0,0,0,0,0,1.30137480043828,0.674338760312407,1.44606617930089,0.772057809126758,1.08939722046203,0.949082476444386,1.75280700608214,0.98110732562673,0.38474715694639,0.738155454624648,0,0,0,1.26755034821831,0.982827216677626,0,0,0.122988438543114,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.587043471179108,0.288732895522148,0,0.380508304469197,0,0,0,0.234004265139238,0.743155811443641,0.93733833986777,1.17587489739202,0.425325291727159,0.447792613514241,0.290633938513962,0,2.95597942737566,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0.871533458600294,0.299918973546171,0,0,0,0,0,0,1.01346914667305,0.205476322550383,0.895304816199478,0.448340575974109,0.394061520403854,0.215627574859517,0.385029108839245,0.76228387266739,0,0,0.502548796003046,0,0.749007023947182,0,0.414415513436035,0,0,0,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,1.32845119707087,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.426910231213777,0.303127571446259,0,0,0.248107807818777,0.460385919864187,0,0.512556597022804,0,0.64341568457443,0,0.616838775210622,0.532685175939381,0.9033987161519,0.519254429183621,0.581051892299796,0.604297247958111,1.00253235151642,0.184161977871793,0.574072240823034,0.546273504020151,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0.812839312631559,0,0.254876273045038,0,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0.574265537996172,0.650060246036521,0,0.096670718292122,0.308097234229289,0.307007349452259,0.137836572484531,0.107420244868274,0,0.255679882248303,0.178064071293475,0.661139661443912,0.960950336825531,0.382838137483752,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0,0,0.353437207037059,0.404364963146632,0,0.421258456238981,0,0.731140468893853,0,0.272999822815972,0.565621727814851,0,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,1.68471475667626,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| ||
|short_description=p2@RBM34 | |short_description=p2@RBM34 | ||
}} | }} |
Latest revision as of 12:14, 16 September 2015
Short description: | p2@RBM34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RBM34_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000468751_5end |
EntrezGene: | RBM34 |
HGNC: | 28965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.58e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.37e-08 | 235 |
disease of cellular proliferation | 8.71e-08 | 239 |
cell type cancer | 4.55e-07 | 143 |
neuroendocrine tumor | 5.85e-07 | 6 |