FFCP PHASE1:Hg19::chr13:110959623..110959640,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:110959623..110959640,+ to FFCP PHASE1:Hg19::chr13:110959623..110959640,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1284 | |EntrezGene=1284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2203 | |HGNC=2203 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPD1,P08572 | |UniProt=E7EPD1,P08572 | ||
|association_with_transcript=0bp_to_ENST00000257309,NM_001846,uc001vqx.2_5end | |||
|cluster_id=chr13:110959623..110959640,+ | |||
|coexpression_cluster_id=C566 | |||
|description=CAGE_peak_1_at_COL4A2_5end | |||
|id=chr13:110959623..110959640,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.44e-19!119;CL:0000055!2.04e-17!180;CL:0000220!1.91e-12!246;CL:0002321!2.40e-12!248;CL:0000183!7.42e-11!59;CL:0000213!6.91e-10!57;CL:0000215!6.91e-10!57;CL:0000680!9.74e-09!57;CL:0000056!9.74e-09!57;CL:0000355!9.74e-09!57;CL:0000187!1.78e-08!54;CL:0000057!1.91e-08!75;CL:1000449!2.71e-08!16;CL:0000192!4.90e-08!42;CL:0000514!4.90e-08!42;CL:0002078!5.15e-08!44;CL:0000115!8.08e-08!35;CL:0000393!1.03e-07!60;CL:0000211!1.03e-07!60;CL:0002139!1.05e-07!24;CL:0000359!4.81e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.42e-08;15!CL:0002139;9.59e-08;24!CL:0000136;1.12e-07;13!CL:0000115;3.84e-07;36!CL:1000497;7.52e-07;17!CL:0002518;7.52e-07;17!CL:0002681;9.73e-07;12!CL:0002584;9.73e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.33e-20,121;CL:0002321,6.23e-13,250;CL:0000213,2.02e-10,58;CL:0000215,2.02e-10,58;CL:0000057,5.34e-09,76;CL:0000680,8.84e-09,58;CL:0000056,8.84e-09,58;CL:0000355,8.84e-09,58;CL:1000449,1.43e-08,15;CL:0002078,1.56e-08,45;CL:0000187,1.63e-08,55;CL:0000115,2.30e-08,36;CL:0000192,4.68e-08,43;CL:0000514,4.68e-08,43;CL:0000393,9.24e-08,61;CL:0000211,9.24e-08,61;CL:0002139,9.56e-08,24;CL:0000359,4.42e-07,32;CL:1000497,7.67e-07,17;CL:0002518,7.67e-07,17;CL:0002681,9.79e-07,12;CL:0002584,9.79e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.29e-20!79;UBERON:0007798!1.29e-20!79;UBERON:0003914!9.30e-19!118;UBERON:0001009!1.97e-17!113;UBERON:0004872!3.86e-17!84;UBERON:0004535!1.18e-16!110;UBERON:0000055!1.25e-16!69;UBERON:0000477!4.24e-14!286;UBERON:0001981!2.15e-13!60;UBERON:0007500!2.15e-13!60;UBERON:0004537!2.15e-13!60;UBERON:0006965!2.15e-13!60;UBERON:0005256!2.54e-13!143;UBERON:0000468!5.36e-13!659;UBERON:0000119!9.60e-13!312;UBERON:0004111!1.22e-12!241;UBERON:0000475!1.87e-12!365;UBERON:0000483!4.34e-12!309;UBERON:0002100!2.04e-11!216;UBERON:0000481!3.94e-11!347;UBERON:0000490!1.85e-10!138;UBERON:0003103!3.49e-10!69;UBERON:0002385!3.63e-10!63;UBERON:0001015!3.63e-10!63;UBERON:0000383!3.63e-10!63;UBERON:0001134!1.01e-09!61;UBERON:0002036!1.01e-09!61;UBERON:0003082!1.01e-09!61;UBERON:0000025!2.15e-09!194;UBERON:0000467!3.38e-09!625;UBERON:0003886!4.96e-09!63;UBERON:0000480!5.77e-09!626;UBERON:0003104!7.58e-09!238;UBERON:0009142!7.58e-09!238;UBERON:0004876!8.63e-09!20;UBERON:0006555!2.19e-08!17;UBERON:0005103!2.19e-08!17;UBERON:0000083!2.19e-08!17;UBERON:0009201!2.19e-08!17;UBERON:0004819!2.19e-08!17;UBERON:0006553!2.19e-08!17;UBERON:0003074!2.19e-08!17;UBERON:0003060!2.19e-08!17;UBERON:0001637!2.70e-08!42;UBERON:0003509!2.70e-08!42;UBERON:0004572!2.70e-08!42;UBERON:0004211!2.71e-08!16;UBERON:0001285!2.71e-08!16;UBERON:0007684!2.71e-08!16;UBERON:0003220!2.71e-08!16;UBERON:0004208!2.71e-08!16;UBERON:0000080!3.16e-08!18;UBERON:0002120!3.16e-08!18;UBERON:0004875!3.16e-08!18;UBERON:0005721!3.16e-08!18;UBERON:0005754!3.16e-08!18;UBERON:0007297!3.16e-08!18;UBERON:0000914!3.77e-08!83;UBERON:0002329!3.77e-08!83;UBERON:0003077!3.77e-08!83;UBERON:0003059!3.77e-08!83;UBERON:0007282!3.77e-08!83;UBERON:0009618!3.77e-08!83;UBERON:0007285!3.77e-08!83;UBERON:0003887!4.02e-08!21;UBERON:0000353!6.47e-08!17;UBERON:0004290!7.77e-08!70;UBERON:0002553!1.01e-07!70;UBERON:0000486!1.22e-07!82;UBERON:0003064!1.69e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.42e-08;15!UBERON:0004819;1.42e-08;15!UBERON:0001285;1.42e-08;15!UBERON:0007684;1.42e-08;15!UBERON:0002049;1.47e-08;75!UBERON:0007798;1.47e-08;75!UBERON:0003914;1.82e-08;74!UBERON:0000055;2.69e-08;65!UBERON:0000353;1.66e-07;15!UBERON:0007500;7.34e-07;56!UBERON:0001981;7.34e-07;56!UBERON:0004537;7.34e-07;56!UBERON:0001637;8.06e-07;42!UBERON:0003509;8.06e-07;42!UBERON:0004572;8.06e-07;42!UBERON:0001225;9.73e-07;12!UBERON:0008987;9.73e-07;12 | |||
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| ||
|short_description=p1@COL4A2 | |||
}} | }} |
Latest revision as of 12:42, 16 September 2015
Short description: | p1@COL4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL4A2_5end |
Coexpression cluster: | C566_Pericytes_Renal_hepatic_Fibroblast_Endothelial_Hepatic_Lens |
Association with transcript: | 0bp_to_ENST00000257309, NM_001846, uc001vqx.2_5end |
EntrezGene: | COL4A2 |
HGNC: | 2203 |
UniProt: | E7EPD1P08572 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.33e-20 | 121 |
embryonic cell | 6.23e-13 | 250 |
lining cell | 2.02e-10 | 58 |
barrier cell | 2.02e-10 | 58 |
fibroblast | 5.34e-09 | 76 |
muscle precursor cell | 8.84e-09 | 58 |
myoblast | 8.84e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.84e-09 | 58 |
epithelial cell of nephron | 1.43e-08 | 15 |
meso-epithelial cell | 1.56e-08 | 45 |
muscle cell | 1.63e-08 | 55 |
endothelial cell | 2.30e-08 | 36 |
smooth muscle cell | 4.68e-08 | 43 |
smooth muscle myoblast | 4.68e-08 | 43 |
electrically responsive cell | 9.24e-08 | 61 |
electrically active cell | 9.24e-08 | 61 |
endothelial cell of vascular tree | 9.56e-08 | 24 |
vascular associated smooth muscle cell | 4.42e-07 | 32 |
kidney cell | 7.67e-07 | 17 |
kidney epithelial cell | 7.67e-07 | 17 |
kidney cortical cell | 9.79e-07 | 12 |
renal cortical epithelial cell | 9.79e-07 | 12 |