FFCP PHASE1:Hg19::chr4:16077778..16077810,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8842 | |EntrezGene=8842 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9454 | |HGNC=9454 | ||
|TSSclassifier=strong | |||
|UniProt=O43490 | |UniProt=O43490 | ||
|association_with_transcript=-37bp_to_ENST00000447510,ENST00000539194,ENST00000540805,NM_001145849,NM_001145850,NM_001145851,NM_001145852,NM_006017,uc003goo.2,uc003gor.2,uc003gos.2,uc003got.2,uc003gou.2,uc010iec.1_5end | |association_with_transcript=-37bp_to_ENST00000447510,ENST00000539194,ENST00000540805,NM_001145849,NM_001145850,NM_001145851,NM_001145852,NM_006017,uc003goo.2,uc003gor.2,uc003gos.2,uc003got.2,uc003gou.2,uc010iec.1_5end | ||
|cluster_id=chr4:16077778..16077810,- | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_2_at_PROM1_5end | |description=CAGE_peak_2_at_PROM1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!7.19e-26!7;CL:0000586!7.19e-26!7;CL:0000313!3.85e-12!1 | |ontology_enrichment_celltype=CL:0000039!7.19e-26!7;CL:0000586!7.19e-26!7;CL:0000313!3.85e-12!1 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.86e-32;7!CL:0000586;2.86e-32;7 | |ontology_enrichment_celltype_v019=CL:0000039;2.86e-32;7!CL:0000586;2.86e-32;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.19e-32,7;CL:0000586,3.19e-32,7 | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.08e-34;3!UBERON:0009117;7.46e-23;10!UBERON:0005564;7.46e-23;10 | |ontology_enrichment_development_v019=UBERON:0003056;7.08e-34;3!UBERON:0009117;7.46e-23;10!UBERON:0005564;7.46e-23;10 | ||
|ontology_enrichment_disease=DOID:3095!1.40e-12!22;DOID:2994!1.40e-12!22;DOID:2152!3.85e-12!1 | |ontology_enrichment_disease=DOID:3095!1.40e-12!22;DOID:2994!1.40e-12!22;DOID:2152!3.85e-12!1 | ||
|ontology_enrichment_disease_v019=DOID:3095;8.48e-11;22!DOID:2994;8.48e-11;22!DOID:5409;1.86e-07;4 | |ontology_enrichment_disease_v019=DOID:3095;8.48e-11;22!DOID:2994;8.48e-11;22!DOID:5409;1.86e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,8.77e-11,22;DOID:2994,8.77e-11,22;DOID:5409,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.11e-22!8;UBERON:0003135!1.39e-16!11;UBERON:0000991!3.42e-13!21;UBERON:0009196!3.42e-13!21;UBERON:0009117!3.42e-13!21;UBERON:0005564!3.42e-13!21;UBERON:0004176!1.37e-12!22;UBERON:0001736!2.20e-12!1;UBERON:0006298!2.20e-12!1;UBERON:0004911!3.85e-12!1;UBERON:0000966!4.55e-10!5;UBERON:0005388!4.55e-10!5;UBERON:0001802!4.55e-10!5;UBERON:0003101!2.11e-08!22;UBERON:0000079!2.11e-08!22;UBERON:0003133!5.28e-08!48;UBERON:0001829!8.06e-07!2 | |ontology_enrichment_uberon=UBERON:0000473!1.11e-22!8;UBERON:0003135!1.39e-16!11;UBERON:0000991!3.42e-13!21;UBERON:0009196!3.42e-13!21;UBERON:0009117!3.42e-13!21;UBERON:0005564!3.42e-13!21;UBERON:0004176!1.37e-12!22;UBERON:0001736!2.20e-12!1;UBERON:0006298!2.20e-12!1;UBERON:0004911!3.85e-12!1;UBERON:0000966!4.55e-10!5;UBERON:0005388!4.55e-10!5;UBERON:0001802!4.55e-10!5;UBERON:0003101!2.11e-08!22;UBERON:0000079!2.11e-08!22;UBERON:0003133!5.28e-08!48;UBERON:0001829!8.06e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.38e-28;8!UBERON:0003135;7.49e-21;11!UBERON:0000966;8.54e-21;5!UBERON:0005388;8.54e-21;5!UBERON:0001802;8.54e-21;5!UBERON:0000970;6.49e-12;20!UBERON:0002104;2.22e-11;21!UBERON:0000991;2.80e-11;21!UBERON:0003101;8.48e-11;22!UBERON:0000079;8.48e-11;22!UBERON:0000020;1.89e-10;23!UBERON:0001032;4.84e-10;24!UBERON:0004456;4.84e-10;24!UBERON:0003133;1.57e-09;44 | |ontology_enrichment_uberon_v019=UBERON:0000473;2.38e-28;8!UBERON:0003135;7.49e-21;11!UBERON:0000966;8.54e-21;5!UBERON:0005388;8.54e-21;5!UBERON:0001802;8.54e-21;5!UBERON:0000970;6.49e-12;20!UBERON:0002104;2.22e-11;21!UBERON:0000991;2.80e-11;21!UBERON:0003101;8.48e-11;22!UBERON:0000079;8.48e-11;22!UBERON:0000020;1.89e-10;23!UBERON:0001032;4.84e-10;24!UBERON:0004456;4.84e-10;24!UBERON:0003133;1.57e-09;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.62e-28,8;UBERON:0003135,8.01e-21,11;UBERON:0000966,1.44e-17,6;UBERON:0005388,1.44e-17,6;UBERON:0001802,1.44e-17,6;UBERON:0000970,2.11e-11,21;UBERON:0002104,2.11e-11,21;UBERON:0000991,2.90e-11,21;UBERON:0009196,2.90e-11,21;UBERON:0009117,2.90e-11,21;UBERON:0005564,2.90e-11,21;UBERON:0004176,8.77e-11,22;UBERON:0003101,8.77e-11,22;UBERON:0000079,8.77e-11,22;UBERON:0000020,4.63e-10,24;UBERON:0001032,4.63e-10,24;UBERON:0004456,4.63e-10,24;UBERON:0003133,1.13e-08,48;UBERON:0005156,4.00e-07,59;UBERON:0000990,4.00e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56148591426813,0,0,0,0,0,0,0,0,0,0,0,63.2746074185491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.8204945280758,1.73814972905999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,1.53916723443601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.109265571963696,0,1.01988829741982,5.34434810531121,1.65410819162721,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56148591426813,0,0,0,0,0,0,0,0,0,0,0,63.2746074185491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.8204945280758,1.73814972905999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,1.53916723443601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.109265571963696,0,1.01988829741982,5.34434810531121,1.65410819162721,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@PROM1 | |short_description=p2@PROM1 | ||
}} | }} |
Latest revision as of 12:47, 16 September 2015
Short description: | p2@PROM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PROM1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -37bp_to_ENST00000447510, ENST00000539194, ENST00000540805, NM_001145849, NM_001145850, NM_001145851, NM_001145852, NM_006017, uc003goo.2, uc003gor.2, uc003gos.2, uc003got.2, uc003gou.2, uc010iec.1_5end |
EntrezGene: | PROM1 |
HGNC: | 9454 |
UniProt: | O43490 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.19e-32 | 7 |
germ cell | 3.19e-32 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 2.62e-28 | 8 |
male reproductive organ | 8.01e-21 | 11 |
retina | 1.44e-17 | 6 |
photoreceptor array | 1.44e-17 | 6 |
posterior segment of eyeball | 1.44e-17 | 6 |
eye | 2.11e-11 | 21 |
visual system | 2.11e-11 | 21 |
gonad | 2.90e-11 | 21 |
indifferent external genitalia | 2.90e-11 | 21 |
indifferent gonad | 2.90e-11 | 21 |
gonad primordium | 2.90e-11 | 21 |
external genitalia | 8.77e-11 | 22 |
male organism | 8.77e-11 | 22 |
male reproductive system | 8.77e-11 | 22 |
sense organ | 4.63e-10 | 24 |
sensory system | 4.63e-10 | 24 |
entire sense organ system | 4.63e-10 | 24 |
reproductive organ | 1.13e-08 | 48 |
reproductive structure | 4.00e-07 | 59 |
reproductive system | 4.00e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.77e-11 | 22 |
germ cell cancer | 8.77e-11 | 22 |
lung small cell carcinoma | 1.92e-07 | 4 |