FFCP PHASE1:Hg19::chr1:236030167..236030214,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468626_5end | |association_with_transcript=0bp_to_ENST00000468626_5end | ||
|cluster_id=chr1:236030167..236030214,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_LYST_5end | |description=CAGE_peak_1_at_LYST_5end | ||
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|ontology_enrichment_celltype=CL:0000738!1.17e-39!140;CL:0000037!1.11e-33!172;CL:0000566!1.11e-33!172;CL:0002032!2.19e-31!165;CL:0000837!2.19e-31!165;CL:0000988!6.65e-31!182;CL:0002031!2.55e-30!124;CL:0000766!6.90e-30!76;CL:0002087!4.56e-29!119;CL:0000557!1.04e-25!71;CL:0000839!2.54e-24!70;CL:0000763!6.29e-24!112;CL:0000049!6.29e-24!112;CL:0002057!7.48e-24!42;CL:0002009!2.11e-22!65;CL:0002194!5.38e-22!63;CL:0000576!5.38e-22!63;CL:0000040!5.38e-22!63;CL:0000559!5.38e-22!63;CL:0000860!1.04e-20!45;CL:0000219!1.80e-08!390;CL:0000134!2.89e-08!358;CL:0002320!5.13e-08!365;CL:0000542!3.05e-07!53;CL:0000051!3.05e-07!53;CL:0000838!4.20e-07!52;CL:0002393!4.27e-07!9;CL:0002397!4.27e-07!9;CL:0000791!8.04e-07!18;CL:0000789!8.04e-07!18;CL:0002420!8.04e-07!18;CL:0002419!8.04e-07!18;CL:0000790!8.04e-07!18 | |ontology_enrichment_celltype=CL:0000738!1.17e-39!140;CL:0000037!1.11e-33!172;CL:0000566!1.11e-33!172;CL:0002032!2.19e-31!165;CL:0000837!2.19e-31!165;CL:0000988!6.65e-31!182;CL:0002031!2.55e-30!124;CL:0000766!6.90e-30!76;CL:0002087!4.56e-29!119;CL:0000557!1.04e-25!71;CL:0000839!2.54e-24!70;CL:0000763!6.29e-24!112;CL:0000049!6.29e-24!112;CL:0002057!7.48e-24!42;CL:0002009!2.11e-22!65;CL:0002194!5.38e-22!63;CL:0000576!5.38e-22!63;CL:0000040!5.38e-22!63;CL:0000559!5.38e-22!63;CL:0000860!1.04e-20!45;CL:0000219!1.80e-08!390;CL:0000134!2.89e-08!358;CL:0002320!5.13e-08!365;CL:0000542!3.05e-07!53;CL:0000051!3.05e-07!53;CL:0000838!4.20e-07!52;CL:0002393!4.27e-07!9;CL:0002397!4.27e-07!9;CL:0000791!8.04e-07!18;CL:0000789!8.04e-07!18;CL:0002420!8.04e-07!18;CL:0002419!8.04e-07!18;CL:0000790!8.04e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000576;4.67e-17;48!CL:0000860;5.79e-17;33!CL:0002057;5.79e-17;33!CL:0000766;1.21e-14;69!CL:0000473;7.20e-14;39!CL:0000234;7.20e-14;39!CL:0002087;1.77e-10;104!CL:0000738;1.33e-09;136!CL:0000763;2.33e-07;100!CL:0000988;4.70e-07;177!CL:0000791;5.77e-07;18!CL:0000789;5.77e-07;18!CL:0002419;5.77e-07;18 | |ontology_enrichment_celltype_v019=CL:0000576;4.67e-17;48!CL:0000860;5.79e-17;33!CL:0002057;5.79e-17;33!CL:0000766;1.21e-14;69!CL:0000473;7.20e-14;39!CL:0000234;7.20e-14;39!CL:0002087;1.77e-10;104!CL:0000738;1.33e-09;136!CL:0000763;2.33e-07;100!CL:0000988;4.70e-07;177!CL:0000791;5.77e-07;18!CL:0000789;5.77e-07;18!CL:0002419;5.77e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.99e-42,136;CL:0000037,6.92e-36,168;CL:0000988,7.28e-34,177;CL:0002032,1.56e-33,161;CL:0000837,1.56e-33,161;CL:0000766,2.97e-33,72;CL:0002031,9.04e-33,120;CL:0002087,1.66e-31,115;CL:0000557,7.45e-29,67;CL:0000839,2.31e-27,66;CL:0000763,3.81e-26,108;CL:0000049,3.81e-26,108;CL:0002009,2.04e-25,61;CL:0002194,4.91e-25,59;CL:0000576,4.91e-25,59;CL:0000040,4.91e-25,59;CL:0000559,4.91e-25,59;CL:0000860,4.74e-24,42;CL:0002057,4.74e-24,42;CL:0000473,8.89e-23,48;CL:0000234,8.89e-23,48;CL:0000219,1.77e-09,386;CL:0000134,2.83e-09,354;CL:0002320,5.31e-09,361;CL:0000542,2.58e-07,53;CL:0000051,2.58e-07,53;CL:0000838,3.56e-07,52;CL:0002393,3.81e-07,9;CL:0002397,3.81e-07,9;CL:0000791,7.22e-07,18;CL:0000789,7.22e-07,18;CL:0002420,7.22e-07,18;CL:0002419,7.22e-07,18;CL:0000790,7.22e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.60e-17;42!CL:0000049;2.76e-07;108!CL:0000790;5.77e-07;18 | |ontology_enrichment_development_v019=CL:0002057;1.60e-17;42!CL:0000049;2.76e-07;108!CL:0000790;5.77e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.91e-32!102;UBERON:0003061!7.91e-32!102;UBERON:0002193!8.84e-27!112;UBERON:0002371!1.90e-22!80;UBERON:0001474!7.40e-20!86;UBERON:0004765!5.68e-17!101;UBERON:0001434!5.68e-17!101;UBERON:0002405!5.00e-14!115;UBERON:0007023!9.09e-10!115;UBERON:0000178!4.05e-09!15;UBERON:0000179!4.05e-09!15;UBERON:0000463!4.05e-09!15;UBERON:0002384!2.06e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!7.91e-32!102;UBERON:0003061!7.91e-32!102;UBERON:0002193!8.84e-27!112;UBERON:0002371!1.90e-22!80;UBERON:0001474!7.40e-20!86;UBERON:0004765!5.68e-17!101;UBERON:0001434!5.68e-17!101;UBERON:0002405!5.00e-14!115;UBERON:0007023!9.09e-10!115;UBERON:0000178!4.05e-09!15;UBERON:0000179!4.05e-09!15;UBERON:0000463!4.05e-09!15;UBERON:0002384!2.06e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.96e-09;15!UBERON:0000179;2.96e-09;15!UBERON:0000463;2.96e-09;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.96e-09;15!UBERON:0000179;2.96e-09;15!UBERON:0000463;2.96e-09;15 | ||
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| ||
|short_description=p1@LYST | |short_description=p1@LYST | ||
}} | }} |
Latest revision as of 13:14, 16 September 2015
Short description: | p1@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LYST_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000468626_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.41e-34 | 98 |
blood island | 1.41e-34 | 98 |
hemolymphoid system | 6.87e-29 | 108 |
bone marrow | 6.20e-25 | 76 |
bone element | 5.05e-22 | 82 |
immune system | 2.61e-21 | 93 |
skeletal element | 6.13e-20 | 90 |
skeletal system | 3.36e-18 | 100 |
adult organism | 1.07e-09 | 114 |
blood | 3.47e-09 | 15 |
haemolymphatic fluid | 3.47e-09 | 15 |
organism substance | 3.47e-09 | 15 |
connective tissue | 2.56e-08 | 371 |