FFCP PHASE1:Hg19::chr1:12185949..12185968,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=943 | |EntrezGene=943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11923 | |HGNC=11923 | ||
|TSSclassifier=strong | |||
|UniProt=P28908 | |UniProt=P28908 | ||
|association_with_transcript=0bp_to_ENST00000413146,NM_152942,uc001atr.2,uc001ats.2_5end | |association_with_transcript=0bp_to_ENST00000413146,NM_152942,uc001atr.2,uc001ats.2_5end | ||
|cluster_id=chr1:12185949..12185968,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_7_at_TNFRSF8_5end | |description=CAGE_peak_7_at_TNFRSF8_5end | ||
|id=chr1:12185949..12185968,+ | |id=chr1:12185949..12185968,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.27e-54!42;CL:0000766!6.10e-52!76;CL:0000860!4.77e-50!45;CL:0002194!1.05e-47!63;CL:0000576!1.05e-47!63;CL:0000040!1.05e-47!63;CL:0000559!1.05e-47!63;CL:0002009!9.06e-46!65;CL:0000839!2.07e-41!70;CL:0000557!1.30e-40!71;CL:0000763!3.35e-38!112;CL:0000049!3.35e-38!112;CL:0000738!6.78e-32!140;CL:0002087!3.76e-26!119;CL:0000037!2.91e-25!172;CL:0000566!2.91e-25!172;CL:0002032!4.65e-25!165;CL:0000837!4.65e-25!165;CL:0000988!8.61e-23!182;CL:0002031!3.41e-22!124;CL:0000094!3.09e-10!8;CL:0002393!2.13e-07!9;CL:0002397!2.13e-07!9;CL:0000081!4.69e-07!11;CL:0000875!9.66e-07!3;CL:0002396!9.66e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.27e-54!42;CL:0000766!6.10e-52!76;CL:0000860!4.77e-50!45;CL:0002194!1.05e-47!63;CL:0000576!1.05e-47!63;CL:0000040!1.05e-47!63;CL:0000559!1.05e-47!63;CL:0002009!9.06e-46!65;CL:0000839!2.07e-41!70;CL:0000557!1.30e-40!71;CL:0000763!3.35e-38!112;CL:0000049!3.35e-38!112;CL:0000738!6.78e-32!140;CL:0002087!3.76e-26!119;CL:0000037!2.91e-25!172;CL:0000566!2.91e-25!172;CL:0002032!4.65e-25!165;CL:0000837!4.65e-25!165;CL:0000988!8.61e-23!182;CL:0002031!3.41e-22!124;CL:0000094!3.09e-10!8;CL:0002393!2.13e-07!9;CL:0002397!2.13e-07!9;CL:0000081!4.69e-07!11;CL:0000875!9.66e-07!3;CL:0002396!9.66e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.14e-78;33!CL:0002057;3.14e-78;33!CL:0000473;2.44e-67;39!CL:0000234;2.44e-67;39!CL:0000576;2.57e-62;48!CL:0000766;4.21e-47;69!CL:0000763;1.33e-22;100!CL:0000094;1.13e-15;8!CL:0000738;5.87e-14;136!CL:0002087;1.57e-13;104!CL:0000875;1.77e-12;3!CL:0002396;1.77e-12;3!CL:0000775;1.06e-11;3!CL:0000081;3.23e-11;11!CL:0000771;3.29e-08;2!CL:0000988;1.10e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.08e-101,48;CL:0000234,5.08e-101,48;CL:0000860,3.43e-99,42;CL:0002057,3.43e-99,42;CL:0000766,1.81e-95,72;CL:0002194,9.78e-88,59;CL:0000576,9.78e-88,59;CL:0000040,9.78e-88,59;CL:0000559,9.78e-88,59;CL:0002009,1.36e-84,61;CL:0000839,1.48e-77,66;CL:0000557,2.84e-76,67;CL:0000763,1.77e-60,108;CL:0000049,1.77e-60,108;CL:0000738,3.25e-48,136;CL:0002087,5.90e-43,115;CL:0002031,8.98e-41,120;CL:0002032,3.93e-39,161;CL:0000837,3.93e-39,161;CL:0000037,4.53e-37,168;CL:0000988,1.17e-34,177;CL:0000094,7.36e-16,8;CL:0002393,4.94e-15,9;CL:0002397,4.94e-15,9;CL:0000875,1.74e-12,3;CL:0002396,1.74e-12,3;CL:0000134,4.60e-12,354;CL:0000775,8.88e-12,3;CL:0002320,1.26e-11,361;CL:0000081,2.38e-11,11;CL:0000219,4.38e-10,386;CL:0000771,2.80e-08,2;CL:0000048,3.29e-08,427;CL:0000723,5.95e-08,433;CL:0000034,1.28e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.80e-70;42!CL:0000049;5.25e-23;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-45!102;UBERON:0003061!1.12e-45!102;UBERON:0002193!2.48e-41!112;UBERON:0002371!2.44e-34!80;UBERON:0001474!6.80e-31!86;UBERON:0004765!2.67e-25!101;UBERON:0001434!2.67e-25!101;UBERON:0002405!1.04e-24!115;UBERON:0003081!3.61e-20!216;UBERON:0007023!1.23e-16!115;UBERON:0002204!8.12e-12!167;UBERON:0000178!8.70e-12!15;UBERON:0000179!8.70e-12!15;UBERON:0000463!8.70e-12!15 | |ontology_enrichment_uberon=UBERON:0002390!1.12e-45!102;UBERON:0003061!1.12e-45!102;UBERON:0002193!2.48e-41!112;UBERON:0002371!2.44e-34!80;UBERON:0001474!6.80e-31!86;UBERON:0004765!2.67e-25!101;UBERON:0001434!2.67e-25!101;UBERON:0002405!1.04e-24!115;UBERON:0003081!3.61e-20!216;UBERON:0007023!1.23e-16!115;UBERON:0002204!8.12e-12!167;UBERON:0000178!8.70e-12!15;UBERON:0000179!8.70e-12!15;UBERON:0000463!8.70e-12!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.09e-14;15!UBERON:0000179;9.09e-14;15!UBERON:0000463;9.09e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.13e-74,98;UBERON:0003061,6.13e-74,98;UBERON:0002371,3.19e-66,76;UBERON:0002193,3.54e-66,108;UBERON:0001474,9.84e-61,82;UBERON:0004765,1.54e-54,90;UBERON:0002405,1.73e-52,93;UBERON:0001434,3.54e-48,100;UBERON:0003081,2.32e-30,203;UBERON:0002204,4.20e-25,167;UBERON:0000926,8.92e-16,315;UBERON:0004120,8.92e-16,315;UBERON:0006603,8.92e-16,315;UBERON:0000178,9.11e-14,15;UBERON:0000179,9.11e-14,15;UBERON:0000463,9.11e-14,15;UBERON:0002384,8.22e-12,371 | |||
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|short_description=p7@TNFRSF8 | |short_description=p7@TNFRSF8 | ||
}} | }} |
Latest revision as of 13:25, 16 September 2015
Short description: | p7@TNFRSF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNFRSF8_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000413146, NM_152942, uc001atr.2, uc001ats.2_5end |
EntrezGene: | TNFRSF8 |
HGNC: | 11923 |
UniProt: | P28908 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.13e-74 | 98 |
blood island | 6.13e-74 | 98 |
bone marrow | 3.19e-66 | 76 |
hemolymphoid system | 3.54e-66 | 108 |
bone element | 9.84e-61 | 82 |
skeletal element | 1.54e-54 | 90 |
immune system | 1.73e-52 | 93 |
skeletal system | 3.54e-48 | 100 |
lateral plate mesoderm | 2.32e-30 | 203 |
musculoskeletal system | 4.20e-25 | 167 |
mesoderm | 8.92e-16 | 315 |
mesoderm-derived structure | 8.92e-16 | 315 |
presumptive mesoderm | 8.92e-16 | 315 |
blood | 9.11e-14 | 15 |
haemolymphatic fluid | 9.11e-14 | 15 |
organism substance | 9.11e-14 | 15 |
connective tissue | 8.22e-12 | 371 |