FFCP PHASE1:Hg19::chr19:18111890..18111902,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:18111890..18111902,+
|short_description=p5@ARRDC2
|description=CAGE_peak_5_at_ARRDC2_5end
|association_with_transcript=-41bp_to_ENST00000379656,NM_0010256...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27106 | |EntrezGene=27106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25225 | |HGNC=25225 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TBH0 | |UniProt=Q8TBH0 | ||
|association_with_transcript=-41bp_to_ENST00000379656,NM_001025604,uc002nhu.2_5end | |||
|cluster_id=chr19:18111890..18111902,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_5_at_ARRDC2_5end | |||
|id=chr19:18111890..18111902,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.87e-23!172;CL:0000566!1.87e-23!172;CL:0002032!8.95e-23!165;CL:0000837!8.95e-23!165;CL:0002031!6.95e-21!124;CL:0000860!9.77e-21!45;CL:0000738!1.65e-20!140;CL:0000988!2.32e-20!182;CL:0002087!2.48e-20!119;CL:0002057!2.27e-19!42;CL:0000763!2.72e-19!112;CL:0000049!2.72e-19!112;CL:0000839!1.37e-18!70;CL:0002194!8.41e-18!63;CL:0000576!8.41e-18!63;CL:0000040!8.41e-18!63;CL:0000559!8.41e-18!63;CL:0000766!1.69e-17!76;CL:0002009!2.24e-17!65;CL:0000557!2.66e-16!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.00e-28;33!CL:0002057;3.00e-28;33!CL:0000473;2.00e-20;39!CL:0000234;2.00e-20;39!CL:0000576;9.26e-20;48!CL:0000766;3.50e-13;69!CL:0002087;9.83e-10;104!CL:0000623;8.51e-08;3!CL:0000738;5.22e-07;136!CL:0000764;5.56e-07;2!CL:0000558;5.56e-07;2!CL:0000763;8.23e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.61e-32,42;CL:0002057,1.61e-32,42;CL:0000473,3.69e-30,48;CL:0000234,3.69e-30,48;CL:0000839,4.15e-29,66;CL:0002031,1.24e-27,120;CL:0002194,1.56e-24,59;CL:0000576,1.56e-24,59;CL:0000040,1.56e-24,59;CL:0000559,1.56e-24,59;CL:0000037,1.68e-24,168;CL:0002087,2.43e-24,115;CL:0000557,3.65e-24,67;CL:0000738,6.69e-24,136;CL:0000766,1.11e-23,72;CL:0002032,1.17e-23,161;CL:0000837,1.17e-23,161;CL:0002009,1.72e-23,61;CL:0000988,1.35e-22,177;CL:0000763,5.41e-21,108;CL:0000049,5.41e-21,108;CL:0000623,1.73e-08,3;CL:0000825,1.73e-08,3;CL:0000764,5.62e-07,2;CL:0000765,5.62e-07,2;CL:0000050,5.62e-07,2;CL:0000038,5.62e-07,2;CL:0000558,5.62e-07,2;CL:0000547,5.62e-07,2;CL:0000549,5.62e-07,2;CL:0000550,5.62e-07,2;CL:0000552,5.62e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.87e-24;42!CL:0000049;4.21e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.99e-17!102;UBERON:0003061!3.99e-17!102;UBERON:0002193!2.28e-14!112;UBERON:0001474!6.17e-14!86;UBERON:0002371!1.69e-13!80;UBERON:0004765!2.05e-10!101;UBERON:0001434!2.05e-10!101;UBERON:0002405!5.50e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.87e-13;15!UBERON:0000179;3.87e-13;15!UBERON:0000463;3.87e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.07e-29,98;UBERON:0003061,1.07e-29,98;UBERON:0002193,5.83e-26,108;UBERON:0002371,2.22e-20,76;UBERON:0001474,7.99e-20,82;UBERON:0004765,2.37e-17,90;UBERON:0002405,1.21e-16,93;UBERON:0001434,7.90e-15,100;UBERON:0000178,6.70e-13,15;UBERON:0000179,6.70e-13,15;UBERON:0000463,6.70e-13,15;UBERON:0003081,2.32e-11,203;UBERON:0002204,3.18e-07,167 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0.767658796194425,0.464448369948228,0.919421224478927,0,0,0.542270404062111,0.142169232487422,0.587200878669695,1.10799081706375,0.601633342410425,1.73608696572681,0.895661896959697,1.29557466407592,0.257575567634187,6.25212426752128,3.77875943688809,7.03493777444667,3.25400651667958,7.40102198439286,2.78735733805593,0.28769239232215,0.512321413058201,0.47296445977717,0.344745680736619,1.29096936716765,0,5.83551252582075,5.73102915121476,5.39336362668203,4.89734227793444,1.92557416245656,3.19668562899521,0.989553900560148,2.19410023383795,1.70489900213078,1.16083695451434,3.40431134814684,0,1.7587406567972,2.08593167368081,1.3031330682307,0.605399502633369,1.10483290796269,0.632924774881769,0.845021145247767,0.850417199860174,0.838634582033504,0.44931452458598,0.150176892841506,0.16072558669708,1.71007646244749,0.79566670879636,1.82664153764634,1.75996244461323,1.09227722252426,0,0.426730222566507,0.800791974072025,0.574752439954483,0.661044872784862,0,0,0.587237189370939,1.52909291250092,0,0.560508562981536,0,0.590129310341499,1.57204305099666,0.822405995998037,0.167186495390678,0.651844533267181,0,0,0.668462741311041,0.294605907474837,0.664601683750863,0.812411591295047,0.128091319725675,0.260118695119756,0.493313713811028,0.552700035571697,0.289803085735052,0.889719378972363,0.802622484269139,0,0.453237370790265,0,1.03088233644789,0.253019692019503,0.318565414324097,1.30216690771284,0,0.752875595388864,0.639933055772092,0,1.18388626022008,0,1.20964045934839,1.33720097891754,1.15859523106239,2.43806866313962,0,0,0,0,0.724232594804119,0.795285947051099,0,0,0,0,0.327447688744282,0,0,0.324547393654683,0,0.26591592103773,0,0,1.11437250398869,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,1.53316637465883,0,0.366403487860815,1.31780417436063,0,0,0.496971951695318,0,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0.74000264525148,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0,0.413303124703062,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.226864366320042,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0.772921620136887,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.609868530647977,0.530119073285941,0.348581828608555,0.207322110030741,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0.591534000199219,0.337169380156203,0.482022059766964,0.441175890929576,0.871517776369625,0.71181185733329,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0.738651018262192,0,0.148631162288728,0.93733833986777,0,0,0,0,0,0,1.23267807618516,0,0.144119953416961,1.00993946741104,0,0,0,0,0.205654985406647,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,4.21667878966063,0,0,0,0.434343920002738,0.205476322550383,0.716243852959582,0.784596007954691,1.97030760201927,1.72502059887614,1.92514554419623,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0,0.391602314925481,0,0.206768026122887,0.431428401637234,1.06727557803444,1.5156378572313,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0.483437798366489,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.3808234705552,43.6597203211584,0,0,0.325378394664303,0.412164046590889,0.0915694648183434,0.330037999682352,0,0,0,0,0.308097234229289,0,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,3.55213326462519,5.35246044999663,5.12682468456746,1.19115887728894,0.411362273086194,2.59389324477087,4.32025149790492,7.13812658664843,0.320472213382419,0,0,0,0.144269212976445,0.497992903438899,0.318852545457645,0.399158742865633,0.957526850661834,0.423347165447766,0.973865820823666,0.280797178113459,1.82587743226554,0.313359791546046,2.50634477090067,0,0.1605880751037,0.605399121573143,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.976940477010201,0.556812347790485,0,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0,0.66866030566487,0.568272293612826,0.23874448473769,0.296964680832639,0,0,0.281338832821026,0.222617410045812,0.16480387422676,0,0.796991953004279,0.276283915531148,0,0.306806047506464,0,0,0.179736702294654,0.179021174675609,0,0.394573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| ||
|short_description=p5@ARRDC2 | |||
}} | }} |
Latest revision as of 13:31, 16 September 2015
Short description: | p5@ARRDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARRDC2_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -41bp_to_ENST00000379656, NM_001025604, uc002nhu.2_5end |
EntrezGene: | ARRDC2 |
HGNC: | 25225 |
UniProt: | Q8TBH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.07e-29 | 98 |
blood island | 1.07e-29 | 98 |
hemolymphoid system | 5.83e-26 | 108 |
bone marrow | 2.22e-20 | 76 |
bone element | 7.99e-20 | 82 |
skeletal element | 2.37e-17 | 90 |
immune system | 1.21e-16 | 93 |
skeletal system | 7.90e-15 | 100 |
blood | 6.70e-13 | 15 |
haemolymphatic fluid | 6.70e-13 | 15 |
organism substance | 6.70e-13 | 15 |
lateral plate mesoderm | 2.32e-11 | 203 |
musculoskeletal system | 3.18e-07 | 167 |