FFCP PHASE1:Hg19::chr11:125648690..125648734,-: Difference between revisions
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|id=chr11:125648690..125648734,-
|short_description=p1@PATE2
|description=CAGE_peak_1_at_PATE2_5end
|association_with_transcript=0bp_to_ENST00000358524,ENST00000436...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=399967 | |EntrezGene=399967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32249 | |HGNC=32249 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UY27 | |UniProt=Q6UY27 | ||
|association_with_transcript=0bp_to_ENST00000358524,ENST00000436890,NM_212555,uc001qcu.2,uc010sbj.1_5end | |||
|cluster_id=chr11:125648690..125648734,- | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_1_at_PATE2_5end | |||
|id=chr11:125648690..125648734,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.51e-57;2!UBERON:0005754;1.33e-29;1!UBERON:0009847;1.14e-10;3!UBERON:0003353;1.14e-10;3!UBERON:0006603;1.71e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0006947!5.09e-29!3;UBERON:0004054!5.09e-29!3;UBERON:0005904!6.19e-22!4;UBERON:0003135!3.02e-21!11;UBERON:0002148!5.44e-19!2;UBERON:0009662!5.44e-19!2;UBERON:0003101!6.49e-15!22;UBERON:0000079!6.49e-15!22;UBERON:0000988!5.47e-13!3;UBERON:0006331!5.47e-13!3;UBERON:0000473!4.32e-11!8;UBERON:0001301!6.73e-11!1;UBERON:0001000!7.40e-11!1;UBERON:0005352!7.40e-11!1;UBERON:0000998!8.14e-11!1;UBERON:0006868!8.14e-11!1;UBERON:0002308!1.54e-09!9;UBERON:0000125!1.54e-09!9;UBERON:0007023!6.47e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.28e-85;3!UBERON:0004054;2.28e-85;3!UBERON:0005904;2.61e-64;4!UBERON:0003135;1.21e-41;11!UBERON:0003101;1.96e-32;22!UBERON:0000079;1.96e-32;22!UBERON:0001301;7.48e-30;1!UBERON:0001000;9.99e-30;1!UBERON:0005352;9.99e-30;1!UBERON:0000998;1.33e-29;1!UBERON:0006868;1.33e-29;1!UBERON:0000058;2.55e-26;10!UBERON:0001255;2.55e-15;2!UBERON:0001556;2.55e-15;2!UBERON:0000473;3.53e-15;8!UBERON:0004175;5.82e-13;21!UBERON:0003937;2.08e-10;12!UBERON:0005399;2.08e-10;12!UBERON:0005156;2.97e-08;59!UBERON:0000990;2.97e-08;59!UBERON:0003133;3.56e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.28e-85,3;UBERON:0004054,2.28e-85,3;UBERON:0005904,2.61e-64,4;UBERON:0003135,1.21e-41,11;UBERON:0003101,2.03e-32,22;UBERON:0000079,2.03e-32,22;UBERON:0001301,7.48e-30,1;UBERON:0001000,9.99e-30,1;UBERON:0005352,9.99e-30,1;UBERON:0000998,1.33e-29,1;UBERON:0006868,1.33e-29,1;UBERON:0003064,1.21e-16,28;UBERON:0001255,2.37e-15,2;UBERON:0001556,2.37e-15,2;UBERON:0000473,3.53e-15,8;UBERON:0000058,3.02e-14,19;UBERON:0000080,1.08e-13,9;UBERON:0002120,1.08e-13,9;UBERON:0004875,1.08e-13,9;UBERON:0005721,1.08e-13,9;UBERON:0005754,1.08e-13,9;UBERON:0007297,1.08e-13,9;UBERON:0005156,2.28e-12,59;UBERON:0000990,2.28e-12,59;UBERON:0004876,2.18e-11,11;UBERON:0004175,5.28e-11,25;UBERON:0003887,1.60e-10,12;UBERON:0003937,2.13e-10,12;UBERON:0005399,2.13e-10,12;UBERON:0006554,3.97e-10,47;UBERON:0003133,5.35e-10,48;UBERON:0001008,6.31e-10,48;UBERON:0007023,3.55e-09,114;UBERON:0000162,5.36e-09,14;UBERON:0001353,5.36e-09,14;UBERON:0000163,5.36e-09,14;UBERON:0006866,5.36e-09,14;UBERON:0000164,5.36e-09,14;UBERON:0000931,5.36e-09,14;UBERON:0000489,5.85e-09,31;UBERON:0003886,6.69e-09,54;UBERON:0004122,1.85e-08,15;UBERON:0002553,6.28e-08,61;UBERON:0001046,7.18e-07,19 | |||
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|short_description=p1@PATE2 | |||
}} | }} |
Latest revision as of 13:35, 16 September 2015
Short description: | p1@PATE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PATE2_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 0bp_to_ENST00000358524, ENST00000436890, NM_212555, uc001qcu.2, uc010sbj.1_5end |
EntrezGene: | PATE2 |
HGNC: | 32249 |
UniProt: | Q6UY27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.26e-08 | 4 |