FFCP PHASE1:Hg19::chr10:118031730..118031758,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=2674 | |EntrezGene=2674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4243 | |HGNC=4243 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_ENST00000369236_5end | |association_with_transcript=35bp_to_ENST00000369236_5end | ||
|cluster_id=chr10:118031730..118031758,- | |||
|coexpression_cluster_id=C1565 | |coexpression_cluster_id=C1565 | ||
|description=CAGE_peak_1_at_GFRA1_5end | |description=CAGE_peak_1_at_GFRA1_5end | ||
Latest revision as of 13:47, 16 September 2015
| Short description: | p1@GFRA1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_GFRA1_5end |
| Coexpression cluster: | C1565_MCF7_normal_mesothelioma_Smooth_breast_thyroid_bone |
| Association with transcript: | 35bp_to_ENST00000369236_5end |
| EntrezGene: | GFRA1 |
| HGNC: | 4243 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@GFRA1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| kidney cell | 6.44e-07 | 17 |
| kidney epithelial cell | 6.44e-07 | 17 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 7.53e-22 | 114 |
| neural plate | 7.45e-14 | 82 |
| presumptive neural plate | 7.45e-14 | 82 |
| neurectoderm | 2.00e-12 | 86 |
| pre-chordal neural plate | 1.83e-11 | 61 |
| neural tube | 8.11e-11 | 56 |
| neural rod | 8.11e-11 | 56 |
| future spinal cord | 8.11e-11 | 56 |
| neural keel | 8.11e-11 | 56 |
| ecto-epithelium | 3.10e-10 | 104 |
Showing 1 to 10 of 33 entries
