FFCP PHASE1:Hg19::chr17:57970074..57970117,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51174 | |EntrezGene=51174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16811 | |HGNC=16811 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCA7 | |UniProt=E9PCA7 | ||
|association_with_transcript=101bp_to_ENST00000394239_5end | |association_with_transcript=101bp_to_ENST00000394239_5end | ||
|cluster_id=chr17:57970074..57970117,- | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_2_at_TUBD1_5end | |description=CAGE_peak_2_at_TUBD1_5end | ||
|id=chr17:57970074..57970117,- | |id=chr17:57970074..57970117,- | ||
|ontology_enrichment_celltype=CL:0000542!6.28e-10!53;CL:0000051!6.28e-10!53;CL:0000838!1.19e-09!52;CL:0000037!5.41e-08!172;CL:0000566!5.41e-08!172;CL:0000988!6.23e-08!182;CL:0002032!7.12e-08!165;CL:0000837!7.12e-08!165;CL:0002087!2.17e-07!119;CL:0002031!2.59e-07!124 | |ontology_enrichment_celltype=CL:0000542!6.28e-10!53;CL:0000051!6.28e-10!53;CL:0000838!1.19e-09!52;CL:0000037!5.41e-08!172;CL:0000566!5.41e-08!172;CL:0000988!6.23e-08!182;CL:0002032!7.12e-08!165;CL:0000837!7.12e-08!165;CL:0002087!2.17e-07!119;CL:0002031!2.59e-07!124 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.12e-10,53;CL:0000051,5.12e-10,53;CL:0000838,1.01e-09,52;CL:0000037,8.08e-07,168;CL:0000988,8.46e-07,177;CL:0002032,9.12e-07,161;CL:0000837,9.12e-07,161 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.81e-07;29 | |||
|ontology_enrichment_disease=DOID:162!2.15e-16!235;DOID:14566!1.69e-15!239;DOID:0050687!4.14e-11!143;DOID:305!1.02e-10!106;DOID:0050686!4.40e-09!137 | |ontology_enrichment_disease=DOID:162!2.15e-16!235;DOID:14566!1.69e-15!239;DOID:0050687!4.14e-11!143;DOID:305!1.02e-10!106;DOID:0050686!4.40e-09!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.39e-18,235;DOID:14566,4.55e-17,239;DOID:0050687,4.43e-12,143;DOID:305,2.44e-11,106;DOID:0050686,1.20e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.74e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.82e-08;9!UBERON:0001557;6.82e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.44e-07,9 | |||
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| ||
|short_description=p2@TUBD1 | |short_description=p2@TUBD1 | ||
}} | }} |
Latest revision as of 13:54, 16 September 2015
Short description: | p2@TUBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TUBD1_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 101bp_to_ENST00000394239_5end |
EntrezGene: | TUBD1 |
HGNC: | 16811 |
UniProt: | E9PCA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.12e-10 | 53 |
common lymphoid progenitor | 5.12e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.01e-09 | 52 |
hematopoietic stem cell | 8.08e-07 | 168 |
hematopoietic cell | 8.46e-07 | 177 |
hematopoietic oligopotent progenitor cell | 9.12e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.12e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.44e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.39e-18 | 235 |
disease of cellular proliferation | 4.55e-17 | 239 |
cell type cancer | 4.43e-12 | 143 |
carcinoma | 2.44e-11 | 106 |
organ system cancer | 1.20e-09 | 137 |