FFCP PHASE1:Hg19::chr12:11463289..11463293,-: Difference between revisions
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|id=chr12:11463289..11463293,-
|short_description=p6@PRB4
|description=CAGE_peak_6_at_PRB4_5end
|association_with_transcript=60bp_to_BC130386_5end
|EntrezGene=5545...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5545 | |EntrezGene=5545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9340 | |HGNC=9340 | ||
|TSSclassifier=strong | |||
|UniProt=P10163 | |UniProt=P10163 | ||
|association_with_transcript=60bp_to_BC130386_5end | |||
|cluster_id=chr12:11463289..11463293,- | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_6_at_PRB4_5end | |||
|id=chr12:11463289..11463293,- | |||
|ontology_enrichment_celltype=CL:0000080!2.74e-12!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;5.42e-195;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001831!1.23e-66!1;UBERON:0001567!1.23e-66!1;UBERON:0008801!1.23e-66!1;UBERON:0001829!3.61e-34!2;UBERON:0004089!3.61e-34!2;UBERON:0001723!3.27e-23!3;UBERON:0001033!3.27e-23!3;UBERON:0010056!3.27e-23!3;UBERON:0000078!8.40e-16!18;UBERON:0000166!1.02e-13!21;UBERON:0001044!2.19e-12!6;UBERON:0003293!2.19e-12!6;UBERON:0003294!2.19e-12!6;UBERON:0010047!2.19e-12!6;UBERON:0000167!2.19e-12!6;UBERON:0000165!1.40e-10!28;UBERON:0000930!1.40e-10!28;UBERON:0000161!1.09e-08!35;UBERON:0003408!5.73e-08!10;UBERON:0001042!6.13e-08!10;UBERON:0009145!6.13e-08!10;UBERON:0002331!6.56e-08!10;UBERON:0000358!6.56e-08!10;UBERON:0000307!6.56e-08!10;UBERON:0000091!6.56e-08!10;UBERON:0000087!6.56e-08!10;UBERON:0007806!6.56e-08!10;UBERON:0008780!6.56e-08!10;UBERON:0005728!6.56e-08!10;UBERON:0006562!2.47e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;5.42e-195;1!UBERON:0001567;5.42e-195;1!UBERON:0001829;1.55e-98;2!UBERON:0004089;1.55e-98;2!UBERON:0001044;4.27e-34;6!UBERON:0003293;4.27e-34;6!UBERON:0003294;4.27e-34;6!UBERON:0010047;4.27e-34;6!UBERON:0003408;4.27e-34;6!UBERON:0000167;4.27e-34;6!UBERON:0001041;1.43e-15;14!UBERON:0000161;6.95e-12;19!UBERON:0000166;6.95e-12;19!UBERON:0001456;6.74e-11;21!UBERON:0000165;1.52e-08;28!UBERON:0002365;4.53e-08;31!UBERON:0002330;4.53e-08;31!UBERON:0004921;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,5.42e-195,1;UBERON:0001567,5.42e-195,1;UBERON:0008801,5.42e-195,1;UBERON:0001829,1.55e-98,2;UBERON:0004089,1.55e-98,2;UBERON:0001044,4.27e-34,6;UBERON:0003293,4.27e-34,6;UBERON:0003294,4.27e-34,6;UBERON:0010047,4.27e-34,6;UBERON:0000167,4.27e-34,6;UBERON:0003408,3.81e-21,10;UBERON:0000166,1.80e-10,22;UBERON:0001456,1.80e-10,22;UBERON:0000165,2.67e-08,29;UBERON:0000930,2.67e-08,29;UBERON:0002365,7.41e-08,31;UBERON:0002330,7.41e-08,31;UBERON:0000161,5.81e-07,36 | |||
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|short_description=p6@PRB4 | |||
}} | }} |
Latest revision as of 13:55, 16 September 2015
Short description: | p6@PRB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRB4_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 60bp_to_BC130386_5end |
EntrezGene: | PRB4 |
HGNC: | 9340 |
UniProt: | P10163 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 5.42e-195 | 1 |
cheek | 5.42e-195 | 1 |
parotid gland primordium | 5.42e-195 | 1 |
major salivary gland | 1.55e-98 | 2 |
midface | 1.55e-98 | 2 |
saliva-secreting gland | 4.27e-34 | 6 |
gland of oral region | 4.27e-34 | 6 |
gland of foregut | 4.27e-34 | 6 |
oral gland | 4.27e-34 | 6 |
oral cavity | 4.27e-34 | 6 |
gland of gut | 3.81e-21 | 10 |
oral opening | 1.80e-10 | 22 |
face | 1.80e-10 | 22 |
mouth | 2.67e-08 | 29 |
stomodeum | 2.67e-08 | 29 |
exocrine gland | 7.41e-08 | 31 |
exocrine system | 7.41e-08 | 31 |
orifice | 5.81e-07 | 36 |