FFCP PHASE1:Hg19::chr13:111837416..111837427,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8874 | |EntrezGene=8874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15607 | |HGNC=15607 | ||
|TSSclassifier=strong | |||
|UniProt=C9JDI6 | |UniProt=C9JDI6 | ||
|association_with_transcript=131bp_to_ENST00000467053_5end | |association_with_transcript=131bp_to_ENST00000467053_5end | ||
|cluster_id=chr13:111837416..111837427,+ | |||
|coexpression_cluster_id=C3353 | |||
|description=CAGE_peak_26_at_ARHGEF7_5end | |description=CAGE_peak_26_at_ARHGEF7_5end | ||
|id=chr13:111837416..111837427,+ | |id=chr13:111837416..111837427,+ | ||
|ontology_enrichment_celltype=CL:0000945!6.49e-61!24;CL:0000826!6.49e-61!24;CL:0000236!6.70e-32!14;CL:0000542!1.94e-30!53;CL:0000051!1.94e-30!53;CL:0000838!4.58e-28!52;CL:0000738!2.52e-14!140;CL:0000037!1.16e-13!172;CL:0000566!1.16e-13!172;CL:0000817!6.69e-13!3;CL:0002087!1.27e-12!119;CL:0000988!1.66e-12!182;CL:0000784!2.39e-11!3;CL:0002032!2.51e-10!165;CL:0000837!2.51e-10!165;CL:0002031!1.28e-09!124;CL:0000785!4.19e-09!2;CL:0000955!4.19e-09!2;CL:0000818!4.19e-09!2;CL:0000954!4.19e-09!2;CL:0000816!4.19e-09!2 | |ontology_enrichment_celltype=CL:0000945!6.49e-61!24;CL:0000826!6.49e-61!24;CL:0000236!6.70e-32!14;CL:0000542!1.94e-30!53;CL:0000051!1.94e-30!53;CL:0000838!4.58e-28!52;CL:0000738!2.52e-14!140;CL:0000037!1.16e-13!172;CL:0000566!1.16e-13!172;CL:0000817!6.69e-13!3;CL:0002087!1.27e-12!119;CL:0000988!1.66e-12!182;CL:0000784!2.39e-11!3;CL:0002032!2.51e-10!165;CL:0000837!2.51e-10!165;CL:0002031!1.28e-09!124;CL:0000785!4.19e-09!2;CL:0000955!4.19e-09!2;CL:0000818!4.19e-09!2;CL:0000954!4.19e-09!2;CL:0000816!4.19e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.76e-83;24!CL:0000236;4.58e-39;13!CL:0000542;1.79e-33;53!CL:0000817;4.29e-12;1!CL:0000785;4.29e-12;1!CL:0000819;4.29e-12;1!CL:0002032;1.07e-11;1!CL:0000946;1.07e-11;1!CL:0000557;1.07e-11;1!CL:0000786;1.07e-11;1!CL:0002087;2.33e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.11e-83,24;CL:0000826,1.11e-83,24;CL:0000542,1.72e-48,53;CL:0000051,1.72e-48,53;CL:0000236,2.91e-47,14;CL:0000838,3.04e-43,52;CL:0000817,1.57e-32,3;CL:0000785,3.93e-22,2;CL:0000955,3.93e-22,2;CL:0000818,3.93e-22,2;CL:0000954,3.93e-22,2;CL:0000816,3.93e-22,2;CL:0002087,5.45e-21,115;CL:0002032,1.19e-18,161;CL:0000837,1.19e-18,161;CL:0000037,8.83e-18,168;CL:0000738,1.99e-17,136;CL:0002031,2.14e-17,120;CL:0000988,9.26e-17,177;CL:0000819,4.06e-12,1;CL:0000946,8.64e-12,1;CL:0000786,8.64e-12,1;CL:0000980,8.64e-12,1;CL:0000134,4.00e-07,354;CL:0002320,6.20e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000051;1.79e-33;53!CL:0000954;5.12e-22;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.83e-18!10;DOID:2531!2.22e-08!51;DOID:0060083!2.22e-08!51 | |ontology_enrichment_disease=DOID:0060058!3.83e-18!10;DOID:2531!2.22e-08!51;DOID:0060083!2.22e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:630;4.29e-12;1!DOID:0050177;4.29e-12;1!DOID:0060073;4.29e-12;1!DOID:8675;4.29e-12;1!DOID:12603;4.29e-12;1!DOID:0050427;4.29e-12;1!DOID:0060058;2.74e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,3.65e-12,1;DOID:0060073,4.06e-12,1;DOID:8675,4.06e-12,1;DOID:630,5.05e-12,1;DOID:0050177,5.05e-12,1;DOID:0050427,5.05e-12,1;DOID:0060058,2.74e-10,10;DOID:2531,1.52e-09,51;DOID:0060083,1.52e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!8.40e-13!7;UBERON:0002106!1.49e-11!3;UBERON:0004854!1.49e-11!3;UBERON:0009034!1.49e-11!3;UBERON:0002095!1.49e-11!3;UBERON:0004782!1.49e-11!3;UBERON:0003281!1.49e-11!3;UBERON:0009664!1.49e-11!3;UBERON:0002296!1.49e-11!3;UBERON:0005602!1.49e-11!3;UBERON:0001179!1.49e-11!3;UBERON:0006293!1.49e-11!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.64201178899891,1.33808328233255,0,0,0.154816123316076,0,0,0,3.48602402611357,2.27470771979874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18455444504853,4.44754626931777,1.70692089026603,1.60158394814405,0.574752439954483,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,2.60124445176006,2.8853842595289,0,0,0,0,0,0,0,1.36940807419915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37191225980366,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,1.27746588066972,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,1.09578409555081,0.599646935549574,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.322944549180031,0.682821857254437,0,0,0,0,0,0.606168477131288,0,0,0,0,0,0,0,0,0,0,0,2.24397944612263 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.64201178899891,1.33808328233255,0,0,0.154816123316076,0,0,0,3.48602402611357,2.27470771979874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18455444504853,4.44754626931777,1.70692089026603,1.60158394814405,0.574752439954483,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,2.60124445176006,2.8853842595289,0,0,0,0,0,0,0,1.36940807419915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37191225980366,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,1.27746588066972,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,1.09578409555081,0.599646935549574,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.322944549180031,0.682821857254437,0,0,0,0,0,0.606168477131288,0,0,0,0,0,0,0,0,0,0,0,2.24397944612263 | ||
|short_description=p26@ARHGEF7 | |short_description=p26@ARHGEF7 | ||
}} | }} |
Latest revision as of 14:02, 16 September 2015
Short description: | p26@ARHGEF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_ARHGEF7_5end |
Coexpression cluster: | C3353_Burkitt_acute_CD19_plasma_diffuse_B_xeroderma |
Association with transcript: | 131bp_to_ENST00000467053_5end |
EntrezGene: | ARHGEF7 |
HGNC: | 15607 |
UniProt: | C9JDI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.11e-83 | 24 |
pro-B cell | 1.11e-83 | 24 |
lymphocyte | 1.72e-48 | 53 |
common lymphoid progenitor | 1.72e-48 | 53 |
B cell | 2.91e-47 | 14 |
lymphoid lineage restricted progenitor cell | 3.04e-43 | 52 |
precursor B cell | 1.57e-32 | 3 |
mature B cell | 3.93e-22 | 2 |
pre-B-II cell | 3.93e-22 | 2 |
transitional stage B cell | 3.93e-22 | 2 |
small pre-B-II cell | 3.93e-22 | 2 |
immature B cell | 3.93e-22 | 2 |
nongranular leukocyte | 5.45e-21 | 115 |
hematopoietic oligopotent progenitor cell | 1.19e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-18 | 161 |
hematopoietic stem cell | 8.83e-18 | 168 |
leukocyte | 1.99e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 2.14e-17 | 120 |
hematopoietic cell | 9.26e-17 | 177 |
B-1 B cell | 4.06e-12 | 1 |
antibody secreting cell | 8.64e-12 | 1 |
plasma cell | 8.64e-12 | 1 |
plasmablast | 8.64e-12 | 1 |
mesenchymal cell | 4.00e-07 | 354 |
connective tissue cell | 6.20e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 3.65e-12 | 1 |
lymphatic system cancer | 4.06e-12 | 1 |
lymphosarcoma | 4.06e-12 | 1 |
genetic disease | 5.05e-12 | 1 |
monogenic disease | 5.05e-12 | 1 |
xeroderma pigmentosum | 5.05e-12 | 1 |
lymphoma | 2.74e-10 | 10 |
hematologic cancer | 1.52e-09 | 51 |
immune system cancer | 1.52e-09 | 51 |