FFCP PHASE1:Hg19::chr13:111837441..111837451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8874 | |EntrezGene=8874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15607 | |HGNC=15607 | ||
|TSSclassifier=strong | |||
|UniProt=C9JDI6 | |UniProt=C9JDI6 | ||
|association_with_transcript=156bp_to_ENST00000467053_5end | |association_with_transcript=156bp_to_ENST00000467053_5end | ||
|cluster_id=chr13:111837441..111837451,+ | |||
|coexpression_cluster_id=C3353 | |||
|description=CAGE_peak_31_at_ARHGEF7_5end | |description=CAGE_peak_31_at_ARHGEF7_5end | ||
|id=chr13:111837441..111837451,+ | |id=chr13:111837441..111837451,+ | ||
|ontology_enrichment_celltype=CL:0000945!7.06e-91!24;CL:0000826!7.06e-91!24;CL:0000236!1.71e-51!14;CL:0000542!1.12e-46!53;CL:0000051!1.12e-46!53;CL:0000838!2.86e-43!52;CL:0002087!1.11e-17!119;CL:0000817!1.15e-16!3;CL:0002032!2.77e-15!165;CL:0000837!2.77e-15!165;CL:0002031!4.62e-15!124;CL:0000037!1.97e-14!172;CL:0000566!1.97e-14!172;CL:0000738!2.83e-14!140;CL:0000988!2.49e-13!182;CL:0000785!1.53e-11!2;CL:0000955!1.53e-11!2;CL:0000818!1.53e-11!2;CL:0000954!1.53e-11!2;CL:0000816!1.53e-11!2 | |ontology_enrichment_celltype=CL:0000945!7.06e-91!24;CL:0000826!7.06e-91!24;CL:0000236!1.71e-51!14;CL:0000542!1.12e-46!53;CL:0000051!1.12e-46!53;CL:0000838!2.86e-43!52;CL:0002087!1.11e-17!119;CL:0000817!1.15e-16!3;CL:0002032!2.77e-15!165;CL:0000837!2.77e-15!165;CL:0002031!4.62e-15!124;CL:0000037!1.97e-14!172;CL:0000566!1.97e-14!172;CL:0000738!2.83e-14!140;CL:0000988!2.49e-13!182;CL:0000785!1.53e-11!2;CL:0000955!1.53e-11!2;CL:0000818!1.53e-11!2;CL:0000954!1.53e-11!2;CL:0000816!1.53e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.73e-93;24!CL:0000236;7.30e-57;13!CL:0000542;4.84e-33;53!CL:0000817;2.05e-13;1!CL:0002032;5.37e-13;1!CL:0000946;5.37e-13;1!CL:0000785;5.37e-13;1!CL:0000557;5.37e-13;1!CL:0000819;5.37e-13;1!CL:0000786;5.37e-13;1!CL:0002087;2.67e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.34e-93,24;CL:0000826,4.34e-93,24;CL:0000236,3.65e-66,14;CL:0000542,1.08e-47,53;CL:0000051,1.08e-47,53;CL:0000838,3.82e-42,52;CL:0000817,9.82e-36,3;CL:0000785,4.23e-24,2;CL:0000955,4.23e-24,2;CL:0000818,4.23e-24,2;CL:0000954,4.23e-24,2;CL:0000816,4.23e-24,2;CL:0002087,7.76e-21,115;CL:0000738,2.35e-17,136;CL:0002031,3.93e-17,120;CL:0002032,1.45e-16,161;CL:0000837,1.45e-16,161;CL:0000037,8.48e-16,168;CL:0000988,6.72e-15,177;CL:0000946,3.33e-13,1;CL:0000786,3.33e-13,1;CL:0000980,3.33e-13,1;CL:0000819,1.09e-12,1 | |||
|ontology_enrichment_development_v019=CL:0000051;4.84e-33;53!CL:0000954;3.33e-24;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.05e-17!10;DOID:2531!3.81e-08!51;DOID:0060083!3.81e-08!51;DOID:12603!8.34e-07!1 | |ontology_enrichment_disease=DOID:0060058!1.05e-17!10;DOID:2531!3.81e-08!51;DOID:0060083!3.81e-08!51;DOID:12603!8.34e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:12603;2.05e-13;1!DOID:630;5.37e-13;1!DOID:0050177;5.37e-13;1!DOID:0060073;5.37e-13;1!DOID:8675;5.37e-13;1!DOID:0050427;5.37e-13;1!DOID:0060058;4.46e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.06e-13,1;DOID:630,4.23e-13,1;DOID:0050177,4.23e-13,1;DOID:0050427,4.23e-13,1;DOID:0060073,1.09e-12,1;DOID:8675,1.09e-12,1;DOID:0060058,4.46e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.49e-17!7;UBERON:0002106!3.66e-15!3;UBERON:0004854!3.66e-15!3;UBERON:0009034!3.66e-15!3;UBERON:0002095!3.66e-15!3;UBERON:0004782!3.66e-15!3;UBERON:0003281!3.66e-15!3;UBERON:0009664!3.66e-15!3;UBERON:0002296!3.66e-15!3;UBERON:0005602!3.66e-15!3;UBERON:0001179!3.66e-15!3;UBERON:0006293!3.66e-15!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p31@ARHGEF7 | |short_description=p31@ARHGEF7 | ||
}} | }} |
Latest revision as of 14:02, 16 September 2015
Short description: | p31@ARHGEF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_ARHGEF7_5end |
Coexpression cluster: | C3353_Burkitt_acute_CD19_plasma_diffuse_B_xeroderma |
Association with transcript: | 156bp_to_ENST00000467053_5end |
EntrezGene: | ARHGEF7 |
HGNC: | 15607 |
UniProt: | C9JDI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.34e-93 | 24 |
pro-B cell | 4.34e-93 | 24 |
B cell | 3.65e-66 | 14 |
lymphocyte | 1.08e-47 | 53 |
common lymphoid progenitor | 1.08e-47 | 53 |
lymphoid lineage restricted progenitor cell | 3.82e-42 | 52 |
precursor B cell | 9.82e-36 | 3 |
mature B cell | 4.23e-24 | 2 |
pre-B-II cell | 4.23e-24 | 2 |
transitional stage B cell | 4.23e-24 | 2 |
small pre-B-II cell | 4.23e-24 | 2 |
immature B cell | 4.23e-24 | 2 |
nongranular leukocyte | 7.76e-21 | 115 |
leukocyte | 2.35e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 3.93e-17 | 120 |
hematopoietic oligopotent progenitor cell | 1.45e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-16 | 161 |
hematopoietic stem cell | 8.48e-16 | 168 |
hematopoietic cell | 6.72e-15 | 177 |
antibody secreting cell | 3.33e-13 | 1 |
plasma cell | 3.33e-13 | 1 |
plasmablast | 3.33e-13 | 1 |
B-1 B cell | 1.09e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.06e-13 | 1 |
genetic disease | 4.23e-13 | 1 |
monogenic disease | 4.23e-13 | 1 |
xeroderma pigmentosum | 4.23e-13 | 1 |
lymphatic system cancer | 1.09e-12 | 1 |
lymphosarcoma | 1.09e-12 | 1 |
lymphoma | 4.46e-11 | 10 |