FFCP PHASE1:Hg19::chr12:114843562..114843576,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6910 | |EntrezGene=6910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11604 | |HGNC=11604 | ||
|TSSclassifier=strong | |||
|UniProt=Q99593 | |UniProt=Q99593 | ||
|association_with_transcript=312bp_to_ENST00000405440,NM_181486,uc001tvo.2_5end | |association_with_transcript=312bp_to_ENST00000405440,NM_181486,uc001tvo.2_5end | ||
|cluster_id=chr12:114843562..114843576,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_8_at_TBX5_5end | |description=CAGE_peak_8_at_TBX5_5end | ||
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|ontology_enrichment_celltype=CL:0002620!1.72e-19!23;CL:0000057!6.15e-17!75;CL:0002334!3.61e-11!12;CL:0002580!1.69e-07!3 | |ontology_enrichment_celltype=CL:0002620!1.72e-19!23;CL:0000057!6.15e-17!75;CL:0002334!3.61e-11!12;CL:0002580!1.69e-07!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.32e-13;1!UBERON:0004140;2.78e-13;1!UBERON:0005062;6.25e-13;4!UBERON:0007284;6.25e-13;4!UBERON:0010227;6.82e-13;1!UBERON:0010226;6.82e-13;1 | |ontology_enrichment_development_v019=UBERON:0000358;2.32e-13;1!UBERON:0004140;2.78e-13;1!UBERON:0005062;6.25e-13;4!UBERON:0007284;6.25e-13;4!UBERON:0010227;6.82e-13;1!UBERON:0010226;6.82e-13;1 | ||
|ontology_enrichment_disease=DOID:17!2.23e-11!5;DOID:450!2.23e-11!5;DOID:66!2.23e-11!5;DOID:423!2.23e-11!5;DOID:0080000!2.23e-11!5;DOID:11722!2.23e-11!5 | |ontology_enrichment_disease=DOID:17!2.23e-11!5;DOID:450!2.23e-11!5;DOID:66!2.23e-11!5;DOID:423!2.23e-11!5;DOID:0080000!2.23e-11!5;DOID:11722!2.23e-11!5 | ||
|ontology_enrichment_disease_v019=DOID:114;5.25e-25;2!DOID:178;2.78e-13;1!DOID:326;2.78e-13;1!DOID:3978;2.78e-13;1!DOID:3394;2.78e-13;1!DOID:5844;2.78e-13;1!DOID:1287;5.23e-13;4 | |ontology_enrichment_disease_v019=DOID:114;5.25e-25;2!DOID:178;2.78e-13;1!DOID:326;2.78e-13;1!DOID:3978;2.78e-13;1!DOID:3394;2.78e-13;1!DOID:5844;2.78e-13;1!DOID:1287;5.23e-13;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,4.95e-25,2;DOID:178,2.62e-13,1;DOID:326,2.62e-13,1;DOID:3978,2.62e-13,1;DOID:3394,2.62e-13,1;DOID:5844,2.62e-13,1;DOID:1287,5.08e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!8.79e-18!27;UBERON:0002199!5.53e-14!45;UBERON:0002416!5.53e-14!45;UBERON:0002097!6.85e-13!40;UBERON:0000948!2.17e-12!24;UBERON:0005498!2.17e-12!24;UBERON:0004140!2.17e-12!24;UBERON:0009881!2.17e-12!24;UBERON:0004141!2.17e-12!24;UBERON:0003084!2.17e-12!24;UBERON:0007005!2.17e-12!24;UBERON:0004139!2.17e-12!24;UBERON:0004291!2.17e-12!24;UBERON:0003103!2.72e-07!69 | |ontology_enrichment_uberon=UBERON:0007100!8.79e-18!27;UBERON:0002199!5.53e-14!45;UBERON:0002416!5.53e-14!45;UBERON:0002097!6.85e-13!40;UBERON:0000948!2.17e-12!24;UBERON:0005498!2.17e-12!24;UBERON:0004140!2.17e-12!24;UBERON:0009881!2.17e-12!24;UBERON:0004141!2.17e-12!24;UBERON:0003084!2.17e-12!24;UBERON:0007005!2.17e-12!24;UBERON:0004139!2.17e-12!24;UBERON:0004291!2.17e-12!24;UBERON:0003103!2.72e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.92e-29;25!UBERON:0003978;6.47e-17;3!UBERON:0000946;6.47e-17;3!UBERON:0004151;2.38e-16;3!UBERON:0002146;1.82e-13;1!UBERON:0005623;1.82e-13;1!UBERON:0000948;2.48e-13;22!UBERON:0002135;3.54e-13;1!UBERON:0002084;6.82e-13;1!UBERON:0002079;6.82e-13;1!UBERON:0002082;6.82e-13;1!UBERON:0002133;3.18e-07;2!UBERON:0002081;4.42e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0007100;1.92e-29;25!UBERON:0003978;6.47e-17;3!UBERON:0000946;6.47e-17;3!UBERON:0004151;2.38e-16;3!UBERON:0002146;1.82e-13;1!UBERON:0005623;1.82e-13;1!UBERON:0000948;2.48e-13;22!UBERON:0002135;3.54e-13;1!UBERON:0002084;6.82e-13;1!UBERON:0002079;6.82e-13;1!UBERON:0002082;6.82e-13;1!UBERON:0002133;3.18e-07;2!UBERON:0002081;4.42e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.72e-27,27;UBERON:0003978,6.74e-17,3;UBERON:0009751,6.74e-17,3;UBERON:0000946,6.74e-17,3;UBERON:0002523,6.74e-17,3;UBERON:0005983,6.74e-17,3;UBERON:0002165,6.74e-17,3;UBERON:0002062,6.74e-17,3;UBERON:0007280,6.74e-17,3;UBERON:0004151,1.49e-16,3;UBERON:0002146,1.82e-13,1;UBERON:0005623,1.82e-13,1;UBERON:0002135,3.76e-13,1;UBERON:0002084,4.23e-13,1;UBERON:0002082,4.23e-13,1;UBERON:0010226,4.23e-13,1;UBERON:0002079,5.38e-13,1;UBERON:0000948,2.87e-12,24;UBERON:0005498,2.87e-12,24;UBERON:0004140,2.87e-12,24;UBERON:0009881,2.87e-12,24;UBERON:0004141,2.87e-12,24;UBERON:0003084,2.87e-12,24;UBERON:0007005,2.87e-12,24;UBERON:0004139,2.87e-12,24;UBERON:0004291,2.87e-12,24;UBERON:0003103,2.42e-10,68;UBERON:0004797,9.24e-08,7;UBERON:0002133,3.28e-07,2;UBERON:0002081,3.93e-07,2;UBERON:0010227,3.93e-07,2 | |||
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|phase1_expression=0.54503513781167,0.428201047781966,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.283604451492204,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.103052529238439,0.772921620136887,0,0.675105328965065,1.07180705677318,0.252433774244115,0.184099797284599,0,1.06502877754984,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,7.56229399238556,0,3.39454300848285,8.58452096273142,6.02562935093056,3.15762320687613,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.579684114443301,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160972,1.31570429747224,0.530067437837643,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.862598491173454,0,0,0.33946505990805,0.637724760305049,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98981115411355,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,1.19370465096821,0.118920090777569,0,0,0.905777061400041,0,0,0,1.22574160876953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,4.69281884806909,0.122241444182866,0,0,0,0 | ||
|short_description=p8@TBX5 | |short_description=p8@TBX5 | ||
}} | }} |
Latest revision as of 14:08, 16 September 2015
Short description: | p8@TBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TBX5_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 312bp_to_ENST00000405440, NM_181486, uc001tvo.2_5end |
EntrezGene: | TBX5 |
HGNC: | 11604 |
UniProt: | Q99593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.72e-27 | 27 |
valve | 6.74e-17 | 3 |
cardiac mesenchyme | 6.74e-17 | 3 |
cardial valve | 6.74e-17 | 3 |
tunica intima | 6.74e-17 | 3 |
heart layer | 6.74e-17 | 3 |
endocardium | 6.74e-17 | 3 |
endocardial cushion | 6.74e-17 | 3 |
presumptive endocardium | 6.74e-17 | 3 |
cardiac chamber | 1.49e-16 | 3 |
pulmonary valve | 1.82e-13 | 1 |
semi-lunar valve | 1.82e-13 | 1 |
mitral valve | 3.76e-13 | 1 |
heart left ventricle | 4.23e-13 | 1 |
cardiac ventricle | 4.23e-13 | 1 |
future cardiac ventricle | 4.23e-13 | 1 |
left cardiac atrium | 5.38e-13 | 1 |
heart | 2.87e-12 | 24 |
primitive heart tube | 2.87e-12 | 24 |
primary heart field | 2.87e-12 | 24 |
anterior lateral plate mesoderm | 2.87e-12 | 24 |
heart tube | 2.87e-12 | 24 |
heart primordium | 2.87e-12 | 24 |
cardiac mesoderm | 2.87e-12 | 24 |
cardiogenic plate | 2.87e-12 | 24 |
heart rudiment | 2.87e-12 | 24 |
compound organ | 2.42e-10 | 68 |
blood vessel layer | 9.24e-08 | 7 |
atrioventricular valve | 3.28e-07 | 2 |
cardiac atrium | 3.93e-07 | 2 |
future cardiac atrium | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.95e-25 | 2 |
vascular disease | 2.62e-13 | 1 |
ischemia | 2.62e-13 | 1 |
extrinsic cardiomyopathy | 2.62e-13 | 1 |
myocardial ischemia | 2.62e-13 | 1 |
myocardial infarction | 2.62e-13 | 1 |
cardiovascular system disease | 5.08e-13 | 4 |