FFCP PHASE1:Hg19::chr12:114845834..114845848,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:114845834..114845848,- to FFCP PHASE1:Hg19::chr12:114845834..114845848,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6910 | |EntrezGene=6910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11604 | |HGNC=11604 | ||
|TSSclassifier=strong | |||
|UniProt=E7ENS7 | |UniProt=E7ENS7 | ||
|association_with_transcript=0bp_to_ENST00000448888_5end | |||
|cluster_id=chr12:114845834..114845848,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_5_at_TBX5_5end | |||
|id=chr12:114845834..114845848,- | |||
|ontology_enrichment_celltype=CL:0002620!6.81e-22!23;CL:0000057!8.55e-13!75;CL:0002580!1.48e-09!3;CL:0002334!7.40e-08!12;CL:0000055!4.86e-07!180;CL:0000569!5.70e-07!4;CL:0000011!5.70e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002598;5.33e-18;2!CL:0002620;1.36e-17;23!CL:0002574;3.71e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002598,5.82e-18,2;CL:0002620,1.09e-17,23;CL:0002574,4.06e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.89e-10;1!UBERON:0004140;2.59e-10;1 | |||
|ontology_enrichment_disease=DOID:17!9.68e-15!5;DOID:450!9.68e-15!5;DOID:66!9.68e-15!5;DOID:423!9.68e-15!5;DOID:0080000!9.68e-15!5;DOID:11722!9.68e-15!5;DOID:114!1.96e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.95e-18;2!DOID:17;6.41e-16;5!DOID:450;6.41e-16;5!DOID:66;6.41e-16;5!DOID:423;6.41e-16;5!DOID:0080000;6.41e-16;5!DOID:11722;6.41e-16;5!DOID:178;7.22e-10;1!DOID:326;7.22e-10;1!DOID:3978;7.22e-10;1!DOID:3394;7.22e-10;1!DOID:5844;7.22e-10;1!DOID:6193;7.22e-10;1!DOID:1287;1.10e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.31e-18,2;DOID:17,5.36e-16,5;DOID:450,5.36e-16,5;DOID:66,5.36e-16,5;DOID:423,5.36e-16,5;DOID:0080000,5.36e-16,5;DOID:11722,5.36e-16,5;DOID:178,5.30e-10,1;DOID:326,5.30e-10,1;DOID:3978,5.30e-10,1;DOID:3394,5.30e-10,1;DOID:5844,5.30e-10,1;DOID:1287,9.02e-10,4;DOID:6193,1.07e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.38e-13!27;UBERON:0002097!6.08e-13!40;UBERON:0002199!1.11e-12!45;UBERON:0002416!1.11e-12!45;UBERON:0003103!3.19e-09!69;UBERON:0000915!5.50e-09!52;UBERON:0000948!3.13e-08!24;UBERON:0005498!3.13e-08!24;UBERON:0004140!3.13e-08!24;UBERON:0009881!3.13e-08!24;UBERON:0004141!3.13e-08!24;UBERON:0003084!3.13e-08!24;UBERON:0007005!3.13e-08!24;UBERON:0004139!3.13e-08!24;UBERON:0004291!3.13e-08!24;UBERON:0003102!4.33e-07!95;UBERON:0000310!5.00e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.89e-10;1!UBERON:0002135;1.89e-10;1!UBERON:0002171;2.59e-10;1!UBERON:0006518;2.59e-10;1!UBERON:0008949;2.59e-10;1!UBERON:0000101;2.59e-10;1!UBERON:0002167;2.59e-10;1!UBERON:0007100;8.95e-09;25!UBERON:0002097;7.77e-08;41!UBERON:0002185;9.54e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,1.80e-10,1;UBERON:0002079,1.98e-10,1;UBERON:0002171,2.84e-10,1;UBERON:0006518,2.84e-10,1;UBERON:0008949,2.84e-10,1;UBERON:0000101,2.84e-10,1;UBERON:0002167,2.84e-10,1;UBERON:0002097,1.32e-09,41;UBERON:0002199,1.77e-08,46;UBERON:0002416,1.77e-08,46;UBERON:0007100,3.74e-08,27;UBERON:0002185,9.88e-08,5 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.587172493218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79389635688862,0.213557388818567,0.423863802319124,1.20036438433761,1.23663035086127,0,0,0.337552664482532,0.389748020644795,3.5340728394176,1.47279837827679,0,2.84007674013291,0.906768884048762,1.52604533079439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,2.08520674723399,0,0,0,0,0,0,0,0,0.496215615637554,1.07423381301644,0.841980283299221,0,0.511707249066704,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.34444334449382,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02359116524534,1.71175595213568,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0319161948297,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58564802544508,0.229160424011684,0,1.59743200399193,3.86303443322914,0.89268582976749,3.89664140423012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00286728461357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28144895081234,3.14408610199332,3.31391244277756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.907385542579434,0.466311601748341,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47997066212368,0,0,0,34.4371370564726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0.665320713092027,0,0,0,0,0,0,0,0,0.402547587182052,0 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|phase1_expression=0.181678379270557,0.856402095563933,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.587172493218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79389635688862,0.213557388818567,0.423863802319124,1.20036438433761,1.23663035086127,0,0,0.337552664482532,0.389748020644795,3.5340728394176,1.47279837827679,0,2.84007674013291,0.906768884048762,1.52604533079439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,2.08520674723399,0,0,0,0,0,0,0,0,0.496215615637554,1.07423381301644,0.841980283299221,0,0.511707249066704,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.34444334449382,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02359116524534,1.71175595213568,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0319161948297,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58564802544508,0.229160424011684,0,1.59743200399193,3.86303443322914,0.89268582976749,3.89664140423012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00286728461357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28144895081234,3.14408610199332,3.31391244277756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.907385542579434,0.466311601748341,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47997066212368,0,0,0,34.4371370564726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0.665320713092027,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p5@TBX5 | |||
}} | }} |
Latest revision as of 14:15, 16 September 2015
Short description: | p5@TBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TBX5_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 0bp_to_ENST00000448888_5end |
EntrezGene: | TBX5 |
HGNC: | 11604 |
UniProt: | E7ENS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 5.82e-18 | 2 |
skin fibroblast | 1.09e-17 | 23 |
stromal cell of pancreas | 4.06e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 1.80e-10 | 1 |
left cardiac atrium | 1.98e-10 | 1 |
lower lobe of right lung | 2.84e-10 | 1 |
right lung lobe | 2.84e-10 | 1 |
lower lobe of lung | 2.84e-10 | 1 |
lobe of lung | 2.84e-10 | 1 |
right lung | 2.84e-10 | 1 |
skin of body | 1.32e-09 | 41 |
integument | 1.77e-08 | 46 |
integumental system | 1.77e-08 | 46 |
primary circulatory organ | 3.74e-08 | 27 |
bronchus | 9.88e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.31e-18 | 2 |
musculoskeletal system disease | 5.36e-16 | 5 |
myotonic disease | 5.36e-16 | 5 |
muscle tissue disease | 5.36e-16 | 5 |
myopathy | 5.36e-16 | 5 |
muscular disease | 5.36e-16 | 5 |
myotonic dystrophy | 5.36e-16 | 5 |
vascular disease | 5.30e-10 | 1 |
ischemia | 5.30e-10 | 1 |
extrinsic cardiomyopathy | 5.30e-10 | 1 |
myocardial ischemia | 5.30e-10 | 1 |
myocardial infarction | 5.30e-10 | 1 |
cardiovascular system disease | 9.02e-10 | 4 |
epithelioid sarcoma | 1.07e-09 | 1 |