FFCP PHASE1:Hg19::chr4:166300153..166300168,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1363 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2303 | |||
|TSSclassifier=strong | |||
|UniProt=P16870 | |||
|association_with_transcript=-43bp_to_ENST00000261510_5end | |||
|cluster_id=chr4:166300153..166300168,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CPE_5end | |||
|id=chr4:166300153..166300168,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.37e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.86e-12;82!UBERON:0003104;8.76e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.55e-40!115;UBERON:0005743!8.63e-39!86;UBERON:0001017!2.43e-38!82;UBERON:0000073!6.24e-38!94;UBERON:0001016!6.24e-38!94;UBERON:0001049!2.34e-34!57;UBERON:0005068!2.34e-34!57;UBERON:0006241!2.34e-34!57;UBERON:0007135!2.34e-34!57;UBERON:0002616!2.53e-33!59;UBERON:0000955!3.71e-33!69;UBERON:0006238!3.71e-33!69;UBERON:0002346!7.07e-31!90;UBERON:0003075!2.61e-30!86;UBERON:0007284!2.61e-30!86;UBERON:0003080!3.43e-26!42;UBERON:0002780!7.59e-26!41;UBERON:0001890!7.59e-26!41;UBERON:0006240!7.59e-26!41;UBERON:0000924!1.72e-25!173;UBERON:0006601!1.72e-25!173;UBERON:0000153!5.23e-25!129;UBERON:0007811!5.23e-25!129;UBERON:0000033!7.63e-25!123;UBERON:0004121!9.95e-25!169;UBERON:0003056!1.07e-21!61;UBERON:0002020!2.04e-21!34;UBERON:0003528!2.04e-21!34;UBERON:0001893!2.28e-21!34;UBERON:0002791!1.03e-20!33;UBERON:0001869!3.31e-20!32;UBERON:0000475!4.41e-20!365;UBERON:0000481!2.26e-17!347;UBERON:0000477!1.63e-16!286;UBERON:0002619!4.94e-16!22;UBERON:0000956!1.94e-15!25;UBERON:0000203!1.94e-15!25;UBERON:0000468!7.44e-15!659;UBERON:0001950!1.34e-14!20;UBERON:0000119!1.37e-14!312;UBERON:0000025!1.48e-14!194;UBERON:0000483!4.12e-14!309;UBERON:0004111!6.93e-13!241;UBERON:0000062!7.77e-13!511;UBERON:0000064!2.65e-12!219;UBERON:0000922!3.84e-12!612;UBERON:0002050!1.04e-10!605;UBERON:0005423!1.04e-10!605;UBERON:0000923!2.16e-10!604;UBERON:0005291!2.16e-10!604;UBERON:0006598!2.16e-10!604;UBERON:0002532!2.16e-10!604;UBERON:0000467!7.42e-10!625;UBERON:0000480!1.17e-09!626;UBERON:0003076!3.29e-09!15;UBERON:0003057!3.29e-09!15;UBERON:0002420!1.14e-07!9;UBERON:0007245!1.14e-07!9;UBERON:0010009!1.14e-07!9;UBERON:0010011!1.14e-07!9;UBERON:0000454!1.14e-07!9;UBERON:0004732!1.27e-07!13;UBERON:0002308!1.76e-07!9;UBERON:0000125!1.76e-07!9;UBERON:0004733!1.77e-07!12;UBERON:0002028!1.77e-07!12;UBERON:0007277!1.77e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.20e-21;41!UBERON:0001890;1.20e-21;41!UBERON:0000073;2.28e-21;53!UBERON:0002616;2.28e-21;53!UBERON:0003528;5.59e-21;34!UBERON:0002020;5.59e-21;34!UBERON:0001893;6.05e-21;34!UBERON:0001869;8.74e-21;32!UBERON:0002791;9.63e-21;32!UBERON:0002619;8.02e-19;22!UBERON:0000956;2.03e-17;25!UBERON:0000203;2.03e-17;25!UBERON:0001950;4.12e-17;20!UBERON:0001017;1.96e-16;75!UBERON:0000955;8.81e-16;68!UBERON:0001016;1.62e-14;83!UBERON:0007023;5.80e-14;114!UBERON:0002420;7.63e-09;9!UBERON:0007245;7.63e-09;9!UBERON:0010009;7.63e-09;9!UBERON:0010011;7.63e-09;9!UBERON:0000454;7.63e-09;9!UBERON:0004732;8.85e-09;13!UBERON:0000125;1.28e-08;9!UBERON:0002308;1.28e-08;9!UBERON:0004733;1.35e-08;12!UBERON:0002028;1.35e-08;12!UBERON:0011216;2.91e-08;132!UBERON:0009663;3.93e-07;7!UBERON:0001871;9.47e-07;6!UBERON:0001894;9.83e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.70e-48,114;UBERON:0001017,9.99e-41,81;UBERON:0001016,1.25e-39,89;UBERON:0001049,1.46e-39,56;UBERON:0005068,1.46e-39,56;UBERON:0006241,1.46e-39,56;UBERON:0007135,1.46e-39,56;UBERON:0000073,2.47e-37,53;UBERON:0002616,2.47e-37,53;UBERON:0002346,6.34e-37,86;UBERON:0003075,1.09e-36,82;UBERON:0007284,1.09e-36,82;UBERON:0000955,2.96e-35,68;UBERON:0006238,2.96e-35,68;UBERON:0011216,7.22e-33,223;UBERON:0002780,7.69e-30,41;UBERON:0001890,7.69e-30,41;UBERON:0003080,7.69e-30,41;UBERON:0006240,7.69e-30,41;UBERON:0010371,3.61e-26,104;UBERON:0003056,6.81e-25,61;UBERON:0004121,1.03e-24,171;UBERON:0000924,1.03e-24,171;UBERON:0006601,1.03e-24,171;UBERON:0003528,1.45e-24,34;UBERON:0002020,1.45e-24,34;UBERON:0010314,1.51e-24,132;UBERON:0001893,1.65e-24,34;UBERON:0001869,4.00e-23,32;UBERON:0002791,4.85e-23,32;UBERON:0002619,8.48e-19,22;UBERON:0000956,1.85e-17,25;UBERON:0000203,1.85e-17,25;UBERON:0001950,4.34e-17,20;UBERON:0000025,2.57e-13,192;UBERON:0004111,3.81e-11,240;UBERON:0003076,1.14e-10,15;UBERON:0003057,1.14e-10,15;UBERON:0000119,9.16e-10,309;UBERON:0000483,2.45e-09,306;UBERON:0002420,7.72e-09,9;UBERON:0007245,7.72e-09,9;UBERON:0010009,7.72e-09,9;UBERON:0010011,7.72e-09,9;UBERON:0000454,7.72e-09,9;UBERON:0004732,8.75e-09,13;UBERON:0000125,1.30e-08,9;UBERON:0002308,1.30e-08,9;UBERON:0004733,1.30e-08,12;UBERON:0002028,1.30e-08,12;UBERON:0007277,1.30e-08,12;UBERON:0000922,1.79e-08,592;UBERON:0005423,9.68e-08,581;UBERON:0000923,2.26e-07,560;UBERON:0010316,2.26e-07,560;UBERON:0005291,2.26e-07,560;UBERON:0006598,2.26e-07,560;UBERON:0010317,2.26e-07,560;UBERON:0002532,2.26e-07,560;UBERON:0002050,2.77e-07,564;UBERON:0009663,3.96e-07,7;UBERON:0001871,9.78e-07,6;UBERON:0001894,9.87e-07,7;UBERON:0006222,9.87e-07,7 | |||
|phase1_expression=12.8991649282095,17.5562429590606,20.5793429980118,12.0087958023756,17.4314826826642,54.0849884942229,2.53299878168311,3.79031924056099,2.35067065379855,0.737201809504527,0,0,0,6.43585035392242,7.95353701746998,1.34465029290355,0,2.92124036154949,0,6.03293184576261,1.63200552995402,5.01527554364941,3.14859585844162,0.547497700291537,1.75759695432724,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,1.91793842765295,0.722878304769133,3.50936537445123,2.75208386025565,2.3858578411533,0.486634870302636,3.40325341790644,1.77383517970051,2.0202000709419,30.1906769022228,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,0.714397826272638,1.34717623575702,1.57656072676651,0,0.949265659568129,0,0,0,0.436094052142534,2.98183171017191,1.8994576749687,4.10468460520978,14.0549944166919,2.12801029319014,3.92474320099615,1.06748995729705,2.71334303258876,2.17847724779836,0.134710672069688,0.490385709340376,17.557461606812,13.25204626304,0.70296429550139,0.312160076830321,0,0.597794722207204,0.23486899728753,0.161872944368132,0.140450806702248,0.408308342509787,0.737005903870608,0.516628905878827,0,0,0.910161361938026,0,1.34668891163253,0.250237039743928,0.277064115484183,0,0.919463387397059,0.751190294532984,1.02088964844019,1.07633781413317,11.5320989962026,1.05965950579781,0,0.103052529238439,0.257640540045629,0.37223371266318,0,0.0974370051611986,0.252433774244115,1.01254888506529,6.46584227275248,2.13005755509969,0.403008392910561,0.339121184620975,0.57978255948989,0.272746120590835,0.286804595389004,0.975789649036763,1.59035721985782,1.62671520017326,8.29288440122964,1.51392510525377,1.09493207722749,0,3.21620469096443,1.38134921352481,0.928735856063958,0,0.828147600278907,1.34867752062481,2.16909926895134,1.32352767278873,0.871517776369625,1.66089433377768,1.75280700608214,1.37355025587742,1.92373578473195,0,0,3.7041661019826,1.47008711385542,0,0,2.36315962672562,0,0.860919069801795,1.3725424823882,0.109750285408626,0,0,0.740707561268237,0.651616610620649,0,0,4.17349457910277,7.51415643109259,0,0,0,0,3.43394464837949,0.246217006087397,0,0,0,0,0,0.895585227028483,0.871901815541886,0.383382679165211,0,0,0.621984346622316,0.144119953416961,0.37872730027914,0.126995788584338,0,0,3.4214489204541,0,0,0,2.46688385559794,4.79556075716608,1.68678057388185,0.904902010304444,0,0,0.531876233169741,0,0.257207374262142,0,0,2.43062589218851,0,0,0.977208552881205,1.06617584622764,0,6.63166629531089,10.4584015032035,5.19859554146697,0,0,0,0.718874566474748,2.29723871668228,0,0.723906533337896,0.61642896765115,0.537182889719687,0,0,0,0,10.9260688415659,27.3293693101006,30.9315525111078,39.7013548842407,17.8622850462886,0,0,0,13.4960640891054,6.5022167737758,2.98391526069709,2.07970861530807,3.21172179834891,1.73472656537328,0.819989904948992,19.5614964823017,11.3703752027992,3.10419213877515,3.98535359121262,1.29058417979192,0,6.65723935373318,9.60801586670397,0,0,0,0,0,0.30239029332968,13.6459294300327,8.74733247741956,9.82310330515758,13.3264715225929,13.816095724801,15.4419764297863,13.3576259800492,0.308419387605311,0.710246901252508,0.246381468041427,0.519254429183621,0.464841513839837,0.725156697549733,0.40101294060657,1.28913384510255,0,0,0,0,0.616122696835318,0.784349769176855,0,1.89992932007176,0,0,0.431831832204279,0,0.541892875087706,1.00337954770971,0,0,0.223874754722178,0,0,1.28225062558195,1.31205858279882,2.92840555197873,3.29731237272711,37.6350500403391,46.6178674551322,0,0.650060246036521,9.64103579064957,0.48335359146061,0.924291702687866,1.84204409671355,0.413509717453592,1.39646318328756,1.0151168573996,0.681813019328807,1.78064071293475,0,0.192190067365106,0.127612712494584,0,1.39453664789186,9.75918275174984,0,0,0,0.869932992075073,0.37064843820784,1.28812398067792,4.83805880167568,3.48017367190598,0.953150969619124,0.511795582622668,2.56763392820352,0,0.78494864019923,1.2591072030832,3.84351841630477,1.29593642580255,0,0,0.842516912477962,0.48763373908959,0.243713489631284,0,0,0.141405431953713,2.26016233240486,0.551365343546124,0,0.876901770507525,1.73632660280006,2.62357900818653,0.405820753925408,0.30982349809975,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0.422215270595328,1.31717957183961,0.379473173765715,1.39973888097993,0,0,0,2.7301702225266,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,4.91390727186376,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894704431569664,0,0,0,0,0,0,0,0,13.1857361344705,1.45632626099416,0,0,0,2.37571744666111,0,199.823677201026,244.342776305061,0.556543525114529,0,0,66.1503320993552,4.42054264849836,42.0727688916641,0.20453736500431,0,2.17727711363265,0.629078458031288,0.895105873378046,0,9.37112353550869,0,0,110.503933054855,86.088795094198,37.9266216202269,0.520855522170466,0,13.0499923578263,0.910347586283997,2.79679015322043,1.89110145414349,6.55012409158783,4.95727842751532,30.5579991082594,182.462725477651,228.409654756523,180.046448854158,194.066601179299,96.0529761599029,103.549907456675,3.05027697853172,0.83654246567162,14.5435988572176,10.1408429703831,0,0,0,0.638002319463839,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,6.20284671004761,0,1.73110911793673,3.98104772431402,7.96118080530053,12.8316330436061,0,0,0,55.6059347090586,34.5108388338479,84.5694649068474,0,0.782658475728359,0.728341138602278,13.8104540997287,13.308978765353,44.9926959596821,21.4202504940574,1.65355761355942,2.38482840213668,0,0.330991955875499,0.313932918407225,1.19472429772959,2.27687636823834,0,1.38847790668105,0.195984794828755,0.0870592065804026,32.6738869612596,0,0.290268993867255,0,0,10.183846731284,0,51.7495896387419,0.548167698587004,0,100.537543977935,1.56441106187842,0.561111741760736,19.6376755160204,11.7887669653457,0,0,22.6505397177793,0.14405479798815,0.49701014226173,1.88555227693436,0.271808412147228,0.523014231561666,0.713987523454252,4.04530825862126,98.4689273484055,89.5361177953635,0,74.3494213656526,0.525774708558629,14.5226848661572,22.9160424011684,13.6395874669595,5.19165401297377,4.72148652950228,12.0512587018611,16.4599507592479,1.44119953416961,2.32991899054908,21.6653751344865,22.6643610548208,24.2652757875066,0,0,177.336220827475,285.618542615974,0.803765742325096,1.51293380256957,1.24632101408756,0,0,123.078601789158,0,6.14684516933746,10.8056451558096,0.316801009558219,0.35857467866569,0,15.7232971802141,5.95882773328889,6.86525051667825,1.08599920350743,0.864221491201268,0.979762080328227,1.19730191562487,0.082092520749339,0.681552087141687,0.566560457600628,1.46552233678082,2.65013777824443,70.0713623479604,104.860453181953,0.855434189421647,0,5.76652027865551,18.7073123068602,6.62782488555513,4.96166021811951,0,0,3.83004754662109,26.1128545617348,21.3086409919295,29.7155209460558,16.3936315354902,29.6832241912943,108.100317955972,107.50513937863,127.068794667097,72.249558656949,105.271669908473,73.0874662620083,13.9732121285593,0.124980407962107,0.151649117541648,0,0.235265819698172,3.74667924645505,13.9124187466392,0.149254802886874,2.10341978862502,1.10961172300523,0.378806010550178,0.50313580350515,0,0.457680136793847,0.756154618816195,0.310874401165561,0.443565449968902,1.27437413730962,5.84744045812686,1.08684069813382,0.829412415681711,4.51930914748591,7.30443086536427,20.8858076506134,9.52013030421988,2.44122439922797,0.181848659202559,4.40383283874203,6.03243887842042,2.78667122089031,0,1.71697852591396,0.336749488765919,0,0,0,0,0,0.463044948647668,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0.303859956177382,128.718604057261,0,0,0,7.8626363723139,0.491545817507439,0.422624246717254,0,0.213383459388282,0,0.567515953566836,0.184105950251841,0.279759015438889,0,9.46418347647022,6.46948868380091,2.35898912783845,19.4393155981785,0.33946505990805,4.03892348193197,10.2866684334972,1.11728983594649,0.954013051960256,0,65.6468013594085,55.3701231594374,0.3062454773532,119.851734029993,69.4313223995366,102.00603593752,75.0725893121163,27.2237431919456,85.7549930556302,106.089499180126,4.28308260777463,0,0.11796972334774,0,0,5.72073143200751,0.690359926060101,81.1578186234401,12.9361764760722,3.0255760305528,14.0672522021957,0,0,0,92.7291036810559,85.1375127489094,134.553104522271,91.1285192486441,32.8184885410932,11.5134131040008,11.4128571029538,9.67291843977913,0.383287282918786,66.4270276489076,69.6107304992966,89.2239438227848,88.3329302443035,1.33053555243958,0,32.5827217931095,65.1829739247816,84.7153323489496,0.827356886187777,1.89093383216518,31.0832647688036,172.041570958022,0,18.2631744101899,2.59113109462346,0,20.8711508995837,2.05417695252545,0,1.21700790611806,0.801711364730253,2.27937780579341,4.95083583572455,1.38251932362818,13.3370481234286,0,0,7.19757985324579,1.14553434272025,2.48165108531456,0,0.559277158988962,0,0.121917924982269,2.58971534875158,9.23965261706223,9.27851545070559,22.8284166737796,4.2109103423179,0,1.07028081699812,1.1294608203896,5.49702583727146,38.4955251095018,2.31522474323834,11.1465375857018,84.1867960487126,4.6578181133242,34.1730993297358,52.6106691868053,90.0050592991071,52.4093102203416,0.509781344063451,0.751871343838829,2.12711030312805,0,0.357107877211315,1.05868461514708,0,15.3370641531769,11.009502801709,58.769229092095,7.88857810965923,105.862750227254,37.9625100596128,22.2191273016468,0.743990036333503,0,2.16313281061895,0.630832124175395,0.98339014767326,13.1766441051894,0.509944148709909,0,0.18378979906969,0.250707539292375,29.1747988140222,22.7769510632752,101.158671613971,96.1926861515626,15.7793146606726,37.8522446027347,2.90650094262028,6.51784500106508,2.01837352645104,30.7415774483536,61.2415082543404,9.14410341167238,22.2451645705433,10.5069202702757,14.5596076947133,48.568412055718,0.244209805832924,0.853818767021724,3.8614456457388,0.269475606319761,14.0784565442073,20.6588040669044,32.9585904435748,15.3124058062668,24.7566766116962,0 | |||
|short_description=p2@CPE | |||
}} |
Latest revision as of 14:26, 16 September 2015
Short description: | p2@CPE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CPE_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -43bp_to_ENST00000261510_5end |
EntrezGene: | CPE |
HGNC: | 2303 |
UniProt: | P16870 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data