FFCP PHASE1:Hg19::chr12:11546616..11546637,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=653247 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9338 | |||
|TSSclassifier=strong | |||
|UniProt=P02812 | |||
|association_with_transcript=-103bp_to_K03208_5end | |||
|cluster_id=chr12:11546616..11546637,- | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_5_at_PRB2_5end | |||
|id=chr12:11546616..11546637,- | |||
|ontology_enrichment_celltype=CL:0002379!2.21e-40!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;9.37e-99;1!UBERON:0008814;4.52e-50;2!UBERON:0010056;4.52e-50;2 | |||
|ontology_enrichment_disease=DOID:3620!2.21e-40!1;DOID:3565!2.21e-40!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001831!6.62e-41!1;UBERON:0001567!6.62e-41!1;UBERON:0008801!6.62e-41!1;UBERON:0001154!1.48e-40!1;UBERON:0001153!1.48e-40!1;UBERON:0001829!3.11e-21!2;UBERON:0004089!3.11e-21!2;UBERON:0003127!6.96e-21!2;UBERON:0001723!1.40e-14!3;UBERON:0001033!1.40e-14!3;UBERON:0010056!1.40e-14!3;UBERON:0000078!6.79e-10!18;UBERON:0004907!2.97e-09!5;UBERON:0000166!1.27e-08!21;UBERON:0001044!5.54e-08!6;UBERON:0003293!5.54e-08!6;UBERON:0003294!5.54e-08!6;UBERON:0010047!5.54e-08!6;UBERON:0000167!5.54e-08!6;UBERON:0003126!6.39e-07!7;UBERON:0001005!6.39e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;9.37e-99;1!UBERON:0001567;9.37e-99;1!UBERON:0001829;2.74e-50;2!UBERON:0004089;2.74e-50;2!UBERON:0001723;5.96e-34;3!UBERON:0001033;5.96e-34;3!UBERON:0001044;7.67e-18;6!UBERON:0003293;7.67e-18;6!UBERON:0003294;7.67e-18;6!UBERON:0010047;7.67e-18;6!UBERON:0003408;7.67e-18;6!UBERON:0000167;7.67e-18;6!UBERON:0000165;2.22e-15;28!UBERON:0001041;1.86e-08;14!UBERON:0007811;8.21e-08;52!UBERON:0001555;1.91e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,9.37e-99,1;UBERON:0001567,9.37e-99,1;UBERON:0008801,9.37e-99,1;UBERON:0001829,2.74e-50,2;UBERON:0004089,2.74e-50,2;UBERON:0001723,5.96e-34,3;UBERON:0001033,5.96e-34,3;UBERON:0010056,5.96e-34,3;UBERON:0000166,3.41e-19,22;UBERON:0001044,7.67e-18,6;UBERON:0003293,7.67e-18,6;UBERON:0003294,7.67e-18,6;UBERON:0010047,7.67e-18,6;UBERON:0000167,7.67e-18,6;UBERON:0000165,6.74e-15,29;UBERON:0000930,6.74e-15,29;UBERON:0000161,2.91e-12,36;UBERON:0003408,2.73e-11,10;UBERON:0001042,3.02e-11,10;UBERON:0009145,3.02e-11,10;UBERON:0006562,2.37e-10,11;UBERON:0001444,2.38e-09,49;UBERON:0000033,2.46e-08,56;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62;UBERON:0008814,7.60e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,578.411944034327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08858373948481,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@PRB2 | |||
}} |
Latest revision as of 14:52, 16 September 2015
Short description: | p5@PRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRB2_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | -103bp_to_K03208_5end |
EntrezGene: | PRB2 |
HGNC: | 9338 |
UniProt: | P02812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 9.37e-99 | 1 |
cheek | 9.37e-99 | 1 |
parotid gland primordium | 9.37e-99 | 1 |
major salivary gland | 2.74e-50 | 2 |
midface | 2.74e-50 | 2 |
tongue | 5.96e-34 | 3 |
gustatory system | 5.96e-34 | 3 |
future tongue | 5.96e-34 | 3 |
oral opening | 3.41e-19 | 22 |
saliva-secreting gland | 7.67e-18 | 6 |
gland of oral region | 7.67e-18 | 6 |
gland of foregut | 7.67e-18 | 6 |
oral gland | 7.67e-18 | 6 |
oral cavity | 7.67e-18 | 6 |
mouth | 6.74e-15 | 29 |
stomodeum | 6.74e-15 | 29 |
orifice | 2.91e-12 | 36 |
gland of gut | 2.73e-11 | 10 |
chordate pharynx | 3.02e-11 | 10 |
pharyngeal region of foregut | 3.02e-11 | 10 |
pharynx | 2.37e-10 | 11 |
subdivision of head | 2.38e-09 | 49 |
head | 2.46e-08 | 56 |
anterior region of body | 1.20e-07 | 62 |
craniocervical region | 1.20e-07 | 62 |
pharyngeal arch system | 7.60e-07 | 18 |