FFCP PHASE1:Hg19::chr2:26492664..26492712,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:26492664..26492712,+
|short_description=p8@HADHB
|description=CAGE_peak_8_at_HADHB_5end
|association_with_transcript=-93bp_to_uc010ykx.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3032 | |EntrezGene=3032 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4803 | |HGNC=4803 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-93bp_to_uc010ykx.1_5end | |||
|cluster_id=chr2:26492664..26492712,+ | |||
|coexpression_cluster_id=C1566 | |||
|description=CAGE_peak_8_at_HADHB_5end | |||
|id=chr2:26492664..26492712,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.17e-20!42;CL:0000860!1.08e-18!45;CL:0002194!1.63e-14!63;CL:0000576!1.63e-14!63;CL:0000040!1.63e-14!63;CL:0000559!1.63e-14!63;CL:0002009!6.54e-14!65;CL:0000839!1.48e-12!70;CL:0000557!2.62e-12!71;CL:0000766!3.60e-11!76;CL:0002159!6.81e-11!13;CL:0000622!1.10e-10!5;CL:0002623!1.93e-10!3;CL:0002621!5.08e-09!3;CL:0000154!6.90e-09!6;CL:0002076!8.21e-09!43;CL:0000240!9.64e-09!6;CL:0000311!9.64e-09!6;CL:0000079!9.64e-09!6;CL:0000237!9.64e-09!6;CL:0000036!9.64e-09!6;CL:0000357!9.64e-09!6;CL:0000114!9.64e-09!6;CL:0002251!5.33e-08!21;CL:0000575!6.26e-07!2;CL:0002087!7.28e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000622;2.45e-26;5!CL:0000154;4.52e-22;6!CL:0002623;2.87e-20;3!CL:0002336;9.98e-16;1!CL:0002261;9.98e-16;1!CL:0002170;9.98e-16;1!CL:0002327;1.85e-15;4!CL:0000150;6.08e-15;9!CL:0000240;1.50e-10;6!CL:0000311;1.50e-10;6!CL:0000079;1.50e-10;6!CL:0000237;1.50e-10;6!CL:0002159;1.07e-09;14!CL:0000317;2.48e-08;2!CL:1000448;2.48e-08;2!CL:0002308;2.48e-08;2!CL:0002140;2.48e-08;2!CL:0000362;3.04e-07;9!CL:0002251;4.38e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.16e-26,5;CL:0000154,4.06e-22,6;CL:0002623,3.32e-20,3;CL:0002336,9.99e-16,1;CL:0002261,9.99e-16,1;CL:0002170,9.99e-16,1;CL:0002327,1.66e-15,4;CL:0000150,5.66e-15,9;CL:0000240,1.57e-10,6;CL:0000311,1.57e-10,6;CL:0000079,1.57e-10,6;CL:0000237,1.57e-10,6;CL:0000036,1.57e-10,6;CL:0000357,1.57e-10,6;CL:0000114,1.57e-10,6;CL:0002159,9.52e-10,14;CL:0000317,2.00e-08,2;CL:1000448,2.00e-08,2;CL:0002308,2.00e-08,2;CL:0002140,2.00e-08,2;CL:0000362,2.86e-07,9;CL:0002251,4.52e-07,20;CL:0002077,5.54e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;1.50e-10;6!CL:0000114;1.50e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-11!80;UBERON:0001474!1.78e-10!86;UBERON:0000166!1.14e-09!21;UBERON:0004765!3.43e-09!101;UBERON:0001434!3.43e-09!101;UBERON:0001949!5.08e-09!3;UBERON:0002390!5.90e-09!102;UBERON:0003061!5.90e-09!102;UBERON:0000165!1.37e-08!28;UBERON:0000930!1.37e-08!28;UBERON:0001828!2.41e-08!8;UBERON:0002193!1.09e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.85e-15;4!UBERON:0002365;1.39e-11;31!UBERON:0002330;1.39e-11;31!UBERON:0001044;1.27e-10;6!UBERON:0003293;1.27e-10;6!UBERON:0003294;1.27e-10;6!UBERON:0010047;1.27e-10;6!UBERON:0003408;1.27e-10;6!UBERON:0000167;1.27e-10;6!UBERON:0002419;2.48e-08;2!UBERON:0007771;2.48e-08;2!UBERON:0003297;2.48e-08;2!UBERON:0001821;2.48e-08;2!UBERON:0003487;2.48e-08;2!UBERON:0001820;2.48e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.66e-15,4;UBERON:0005333,1.66e-15,4;UBERON:0008425,1.66e-15,4;UBERON:0005311,1.66e-15,4;UBERON:0002365,1.24e-11,31;UBERON:0002330,1.24e-11,31;UBERON:0001044,1.36e-10,6;UBERON:0003293,1.36e-10,6;UBERON:0003294,1.36e-10,6;UBERON:0010047,1.36e-10,6;UBERON:0000167,1.36e-10,6;UBERON:0002530,1.82e-08,59;UBERON:0002419,2.00e-08,2;UBERON:0007771,2.00e-08,2;UBERON:0003297,2.00e-08,2;UBERON:0001821,2.00e-08,2;UBERON:0003487,2.00e-08,2;UBERON:0001820,2.00e-08,2;UBERON:0005089,2.00e-08,2;UBERON:0005088,2.00e-08,2;UBERON:0000076,3.26e-08,8 | |||
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|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.727752183563449,0.232429036905685,0.411167888021826,1.23882548358041,0,0,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0.272906150057846,0.674170453335254,0.306083892370903,1.28371610830437,0,0.329851300186716,0,0,0,0,0,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878002283269004,2.24803506515239,0.603173834469785,2.31471112896324,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0,4.11969204433102,2.61570544662566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,1.01289087829486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,2.37795163123056,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14432328326074,2.21934020222135,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p8@HADHB | |||
}} | }} |
Latest revision as of 14:55, 16 September 2015
Short description: | p8@HADHB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HADHB_5end |
Coexpression cluster: | C1566_Mammary_nasal_Prostate_salivary_Mallassezderived_Keratinocyte_Small |
Association with transcript: | -93bp_to_uc010ykx.1_5end |
EntrezGene: | HADHB |
HGNC: | 4803 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.16e-26 | 5 |
protein secreting cell | 4.06e-22 | 6 |
acinar cell of salivary gland | 3.32e-20 | 3 |
buccal mucosa cell | 9.99e-16 | 1 |
endothelial cell of viscerocranial mucosa | 9.99e-16 | 1 |
keratinized cell of the oral mucosa | 9.99e-16 | 1 |
mammary gland epithelial cell | 1.66e-15 | 4 |
glandular epithelial cell | 5.66e-15 | 9 |
stratified squamous epithelial cell | 1.57e-10 | 6 |
keratin accumulating cell | 1.57e-10 | 6 |
stratified epithelial cell | 1.57e-10 | 6 |
keratinizing barrier epithelial cell | 1.57e-10 | 6 |
epithelial fate stem cell | 1.57e-10 | 6 |
stratified epithelial stem cell | 1.57e-10 | 6 |
surface ectodermal cell | 1.57e-10 | 6 |
general ecto-epithelial cell | 9.52e-10 | 14 |
sebum secreting cell | 2.00e-08 | 2 |
epithelial cell of sweat gland | 2.00e-08 | 2 |
epithelial cell of skin gland | 2.00e-08 | 2 |
acinar cell of sebaceous gland | 2.00e-08 | 2 |
epidermal cell | 2.86e-07 | 9 |
epithelial cell of alimentary canal | 4.52e-07 | 20 |
ecto-epithelial cell | 5.54e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.66e-15 | 4 |
mammary bud | 1.66e-15 | 4 |
mammary ridge | 1.66e-15 | 4 |
mammary placode | 1.66e-15 | 4 |
exocrine gland | 1.24e-11 | 31 |
exocrine system | 1.24e-11 | 31 |
saliva-secreting gland | 1.36e-10 | 6 |
gland of oral region | 1.36e-10 | 6 |
gland of foregut | 1.36e-10 | 6 |
oral gland | 1.36e-10 | 6 |
oral cavity | 1.36e-10 | 6 |
gland | 1.82e-08 | 59 |
skin gland | 2.00e-08 | 2 |
epidermis gland | 2.00e-08 | 2 |
gland of integumental system | 2.00e-08 | 2 |
sebaceous gland | 2.00e-08 | 2 |
skin sebaceous gland | 2.00e-08 | 2 |
sweat gland | 2.00e-08 | 2 |
sweat gland placode | 2.00e-08 | 2 |
sebaceous gland placode | 2.00e-08 | 2 |
external ectoderm | 3.26e-08 | 8 |