FFCP PHASE1:Hg19::chr1:1289610..1289617,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:1289610..1289617,-
|short_description=p6@MXRA8
|description=CAGE_peak_6_at_MXRA8_5end
|association_with_transcript=9bp_to_ENST00000478517_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54587 | |EntrezGene=54587 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7542 | |HGNC=7542 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000478517_5end | |||
|cluster_id=chr1:1289610..1289617,- | |||
|coexpression_cluster_id=C1000 | |||
|description=CAGE_peak_6_at_MXRA8_5end | |||
|id=chr1:1289610..1289617,- | |||
|ontology_enrichment_celltype=CL:0000055!5.85e-32!180;CL:0000057!2.49e-25!75;CL:0000048!4.93e-12!430;CL:0002334!1.03e-11!12;CL:0002620!1.51e-11!23;CL:0000723!2.92e-11!436;CL:0000034!2.95e-11!444;CL:0000680!6.26e-10!57;CL:0000056!6.26e-10!57;CL:0000355!6.26e-10!57;CL:0002371!1.05e-09!591;CL:0000183!2.60e-09!59;CL:0000144!6.34e-09!625;CL:0000187!1.08e-08!54;CL:0002320!9.54e-08!365;CL:0000393!2.40e-07!60;CL:0000211!2.40e-07!60;CL:0000192!3.10e-07!42;CL:0000514!3.10e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.07e-22;12!CL:0002620;1.09e-09;23!CL:0000136;1.02e-08;13!CL:0000135;1.19e-08;3!CL:0000388;1.19e-08;3!CL:0002615;1.34e-08;3!CL:0002559;5.18e-08;5!CL:0002579;6.03e-08;3!CL:0002580;9.87e-08;3!CL:0000057;1.33e-07;73!CL:0002320;4.34e-07;188!CL:0002570;4.45e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,8.73e-23,12;CL:0000057,1.24e-21,76;CL:0002320,3.81e-12,361;CL:0000136,1.04e-11,15;CL:0000048,3.05e-11,427;CL:0000723,7.55e-11,433;CL:0000034,2.42e-10,441;CL:0000134,4.00e-10,354;CL:0002620,1.30e-09,23;CL:0000135,1.11e-08,3;CL:0000388,1.11e-08,3;CL:0002615,1.20e-08,3;CL:0002559,3.55e-08,5;CL:0002580,4.37e-08,3;CL:0000219,5.73e-08,386;CL:0002579,8.47e-08,3;CL:0002570,6.37e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.88e-07;3!DOID:127;1.88e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.89e-08,3;DOID:127,7.89e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.07e-12!83;UBERON:0002329!7.07e-12!83;UBERON:0003077!7.07e-12!83;UBERON:0003059!7.07e-12!83;UBERON:0007282!7.07e-12!83;UBERON:0009618!7.07e-12!83;UBERON:0007285!7.07e-12!83;UBERON:0004923!1.86e-10!57;UBERON:0004290!5.22e-10!70;UBERON:0002199!1.28e-09!45;UBERON:0002416!1.28e-09!45;UBERON:0002385!4.21e-09!63;UBERON:0001015!4.21e-09!63;UBERON:0000383!4.21e-09!63;UBERON:0003102!6.71e-09!95;UBERON:0005631!9.74e-09!14;UBERON:0000158!9.74e-09!14;UBERON:0000486!1.07e-08!82;UBERON:0001134!1.48e-08!61;UBERON:0002036!1.48e-08!61;UBERON:0003082!1.48e-08!61;UBERON:0002097!8.07e-08!40;UBERON:0002384!1.03e-07!375;UBERON:0003688!4.48e-07!6;UBERON:0002358!4.48e-07!6;UBERON:0003684!4.48e-07!6;UBERON:0001178!4.48e-07!6;UBERON:0000478!6.16e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.46e-17;9!UBERON:0000042;7.46e-17;9!UBERON:0003688;7.42e-15;6!UBERON:0002358;7.42e-15;6!UBERON:0003684;7.42e-15;6!UBERON:0001178;7.42e-15;6!UBERON:0001013;1.15e-09;14!UBERON:0007846;1.19e-08;3!UBERON:0000043;1.19e-08;3!UBERON:0007845;1.19e-08;3!UBERON:0002073;5.18e-08;5!UBERON:0002384;1.65e-07;198!UBERON:0002199;2.73e-07;46!UBERON:0002416;2.73e-07;46!UBERON:0004905;3.34e-07;8!UBERON:0000982;3.34e-07;8!UBERON:0004770;3.34e-07;8!UBERON:0002097;4.60e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.38e-15,6;UBERON:0002358,9.38e-15,6;UBERON:0003684,9.38e-15,6;UBERON:0001178,9.38e-15,6;UBERON:0002384,1.13e-12,371;UBERON:0004457,3.10e-12,12;UBERON:0000042,3.10e-12,12;UBERON:0002199,1.32e-11,46;UBERON:0002416,1.32e-11,46;UBERON:0001013,1.99e-09,14;UBERON:0002097,4.81e-09,41;UBERON:0007846,1.11e-08,3;UBERON:0000043,1.11e-08,3;UBERON:0007845,1.11e-08,3;UBERON:0002073,3.55e-08,5;UBERON:0005086,3.55e-08,5;UBERON:0003102,5.54e-08,99;UBERON:0004905,3.66e-07,8;UBERON:0000982,3.66e-07,8;UBERON:0004770,3.66e-07,8 | |||
|phase1_expression=2.90685406832891,8.13581990785736,2.67813367782345,10.007329835313,3.12872766099101,3.48935409640147,0,0.631719873426831,1.04474251279935,0.245733936501509,0.697801167972428,0.873765488520689,0.791300934685361,0.618831764800233,1.32558950291166,2.6893005858071,1.20538905604795,0.730310090387373,0.487932798790507,0,0.408001382488506,0.626909442956176,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0.50133791063589,2.17269778441236,0.795285947051099,0,0.283604451492204,1.33037638477538,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,0.264818361626438,0.573673241497627,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0.302714855289863,0.576175924479999,0.234321431833797,0.312160076830321,0,0.747243402759005,0.352303495931295,0,0.280901613404497,0.61246251376468,0.859840221182376,0.516628905878827,3.56400857184616,2.47266929278557,0,1.43723628363248,0.168336113954066,0.250237039743928,0,0.877955241761676,4.59731693698529,1.35214253015937,0.113432183160021,1.61450672119976,0.640672166455702,1.05965950579781,1.80054657650641,0.515262646192195,1.03056216018252,0.930584281657949,3.20675031258406,2.24105111870757,1.26216887122057,1.28869858099219,0.323292113637624,5.68015348026583,1.20902517873168,1.18692414617341,0,0,0,0,0.132529768321485,0.232387885739037,0.310983165046111,0,0,1.56449532329816,5.14592750554308,0,4.17931135228781,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.387815147273333,3.57656445851882,0,0.797814349754612,3.12022310734098,0,0,0.266422179016099,0.142977993658148,1.08524321078289,0.823240336780769,0,0,0,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,0,1.14861935834114,0,0.579125226670317,2.26023954805422,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,2.00068208423871,0.271265023699736,0.623912584592421,4.46072471992904,1.10391690523754,0.468565659970853,0.300946099727719,15.9185252839189,1.03473071292505,0.664225598535437,0.553107505625109,0.347534457872331,0.391602314925481,1.37257369524342,0,0,0,0.303127571446259,1.66435439510497,0.907170879989041,1.48864684691266,1.99500565274481,11.7877239661891,1.15325234330131,3.07024349440022,2.41280881715411,7.42090332224955,2.46735510084249,1.9531789784444,0.410635780069046,2.59627214591811,2.32420756919918,0,0.40101294060657,0,0,0.546273504020151,2.22911505431021,0,0.0770153371044148,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.103041011647722,0.27470839445503,0,0,0,0,0.386682873168488,0.462145851343933,0.460511024178389,0.551346289938122,0.537101224341368,0.580066775656914,0.596586391912706,0,0,0,0,0,0.929691098594572,1.25924938732256,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.429374660225974,0.372158369359667,0,0,1.02359116524534,0,0,0.78494864019923,0,1.09814811894422,0,0.404364963146632,0,0.421258456238981,0,0.731140468893853,1.05650146756755,0.409499734223957,1.27264888758341,0,0.551365343546124,0,1.31535265576129,1.73632660280006,0,0,0.92947049429925,0.281695602532241,0.286822704408103,0.196498082026242,0,0,2.53329162357197,2.96365403663912,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.43246690842614,0.593929361665277,1.53580351049616,0,0,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0.23056390438806,0.0897576444097721,0,0.957003479195758,0.457987967009312,0.533034776018635,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,1.62899880526114,1.72844298240254,2.61269888087527,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0.235265819698172,0,0,1.04478362020812,1.8697064787778,0.554805861502613,0.378806010550178,1.25783950876288,2.66943366478961,0.228840068396924,0.453692771289717,0.466311601748341,0.591420599958536,0,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0.450772826991655,0,0,0.181848659202559,0.429642228169954,0.92806751975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| ||
|short_description=p6@MXRA8 | |||
}} | }} |
Latest revision as of 15:00, 16 September 2015
Short description: | p6@MXRA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MXRA8_5end |
Coexpression cluster: | C1000_Osteoblast_Preadipocyte_Hair_Adipocyte_tenocyte_Mesenchymal_leiomyoma |
Association with transcript: | 9bp_to_ENST00000478517_5end |
EntrezGene: | MXRA8 |
HGNC: | 7542 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 8.73e-23 | 12 |
fibroblast | 1.24e-21 | 76 |
connective tissue cell | 3.81e-12 | 361 |
fat cell | 1.04e-11 | 15 |
multi fate stem cell | 3.05e-11 | 427 |
somatic stem cell | 7.55e-11 | 433 |
stem cell | 2.42e-10 | 441 |
mesenchymal cell | 4.00e-10 | 354 |
skin fibroblast | 1.30e-09 | 23 |
fibrocyte | 1.11e-08 | 3 |
tendon cell | 1.11e-08 | 3 |
adipocyte of omentum tissue | 1.20e-08 | 3 |
hair follicle cell | 3.55e-08 | 5 |
preadipocyte of the breast | 4.37e-08 | 3 |
motile cell | 5.73e-08 | 386 |
omentum preadipocyte | 8.47e-08 | 3 |
mesenchymal stem cell of adipose | 6.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.38e-15 | 6 |
peritoneum | 9.38e-15 | 6 |
abdominal cavity | 9.38e-15 | 6 |
visceral peritoneum | 9.38e-15 | 6 |
connective tissue | 1.13e-12 | 371 |
cavity lining | 3.10e-12 | 12 |
serous membrane | 3.10e-12 | 12 |
integument | 1.32e-11 | 46 |
integumental system | 1.32e-11 | 46 |
adipose tissue | 1.99e-09 | 14 |
skin of body | 4.81e-09 | 41 |
dense regular connective tissue | 1.11e-08 | 3 |
tendon | 1.11e-08 | 3 |
regular connective tissue | 1.11e-08 | 3 |
hair follicle | 3.55e-08 | 5 |
hair follicle placode | 3.55e-08 | 5 |
surface structure | 5.54e-08 | 99 |
articulation | 3.66e-07 | 8 |
skeletal joint | 3.66e-07 | 8 |
articular system | 3.66e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.89e-08 | 3 |
leiomyoma | 7.89e-08 | 3 |