FFCP PHASE1:Hg19::chr3:169629354..169629372,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344658 | |EntrezGene=344658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25394 | |HGNC=25394 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z3H4 | |UniProt=Q7Z3H4 | ||
|association_with_transcript=0bp_to_ENST00000335556,ENST00000428432_5end | |association_with_transcript=0bp_to_ENST00000335556,ENST00000428432_5end | ||
|cluster_id=chr3:169629354..169629372,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_1_at_SAMD7_5end | |description=CAGE_peak_1_at_SAMD7_5end | ||
|id=chr3:169629354..169629372,+ | |id=chr3:169629354..169629372,+ | ||
|ontology_enrichment_celltype=CL:0000306!1.13e-13!4;CL:0002222!1.13e-13!4;CL:0002224!1.13e-13!4 | |ontology_enrichment_celltype=CL:0000306!1.13e-13!4;CL:0002222!1.13e-13!4;CL:0002224!1.13e-13!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001882!6.58e-50!1;UBERON:0005403!6.58e-50!1;UBERON:0000970!3.95e-23!20;UBERON:0002104!4.43e-22!21;UBERON:0000020!2.97e-20!23;UBERON:0001032!1.88e-19!24;UBERON:0004456!1.88e-19!24;UBERON:0010077!1.13e-13!4;UBERON:0005389!1.13e-13!4;UBERON:0000484!1.13e-13!4;UBERON:0002546!1.13e-13!4;UBERON:0000965!1.13e-13!4;UBERON:0001803!1.13e-13!4;UBERON:0003073!1.13e-13!4;UBERON:0005426!1.13e-13!4;UBERON:0000369!1.29e-13!4;UBERON:0002435!1.29e-13!4;UBERON:0000204!1.29e-13!4;UBERON:0010082!1.29e-13!4;UBERON:0000019!1.63e-11!19;UBERON:0000047!1.63e-11!19;UBERON:0004088!1.63e-11!19;UBERON:0003072!1.63e-11!19;UBERON:0003071!1.63e-11!19;UBERON:0004128!1.63e-11!19;UBERON:0000966!2.66e-11!5;UBERON:0005388!2.66e-11!5;UBERON:0001802!2.66e-11!5;UBERON:0000349!3.60e-11!5;UBERON:0001456!1.61e-10!21;UBERON:0009663!2.35e-08!7;UBERON:0003056!4.50e-08!61;UBERON:0005085!6.67e-08!29;UBERON:0000076!1.69e-07!8;UBERON:0002308!8.85e-07!9;UBERON:0002420!8.85e-07!9;UBERON:0000125!8.85e-07!9;UBERON:0007245!8.85e-07!9;UBERON:0010009!8.85e-07!9;UBERON:0010011!8.85e-07!9;UBERON:0000454!8.85e-07!9 | |ontology_enrichment_uberon=UBERON:0001882!6.58e-50!1;UBERON:0005403!6.58e-50!1;UBERON:0000970!3.95e-23!20;UBERON:0002104!4.43e-22!21;UBERON:0000020!2.97e-20!23;UBERON:0001032!1.88e-19!24;UBERON:0004456!1.88e-19!24;UBERON:0010077!1.13e-13!4;UBERON:0005389!1.13e-13!4;UBERON:0000484!1.13e-13!4;UBERON:0002546!1.13e-13!4;UBERON:0000965!1.13e-13!4;UBERON:0001803!1.13e-13!4;UBERON:0003073!1.13e-13!4;UBERON:0005426!1.13e-13!4;UBERON:0000369!1.29e-13!4;UBERON:0002435!1.29e-13!4;UBERON:0000204!1.29e-13!4;UBERON:0010082!1.29e-13!4;UBERON:0000019!1.63e-11!19;UBERON:0000047!1.63e-11!19;UBERON:0004088!1.63e-11!19;UBERON:0003072!1.63e-11!19;UBERON:0003071!1.63e-11!19;UBERON:0004128!1.63e-11!19;UBERON:0000966!2.66e-11!5;UBERON:0005388!2.66e-11!5;UBERON:0001802!2.66e-11!5;UBERON:0000349!3.60e-11!5;UBERON:0001456!1.61e-10!21;UBERON:0009663!2.35e-08!7;UBERON:0003056!4.50e-08!61;UBERON:0005085!6.67e-08!29;UBERON:0000076!1.69e-07!8;UBERON:0002308!8.85e-07!9;UBERON:0002420!8.85e-07!9;UBERON:0000125!8.85e-07!9;UBERON:0007245!8.85e-07!9;UBERON:0010009!8.85e-07!9;UBERON:0010011!8.85e-07!9;UBERON:0000454!8.85e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24 | |||
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|short_description=p1@SAMD7 | |short_description=p1@SAMD7 | ||
}} | }} |
Latest revision as of 15:07, 16 September 2015
Short description: | p1@SAMD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SAMD7_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000335556, ENST00000428432_5end |
EntrezGene: | SAMD7 |
HGNC: | 25394 |
UniProt: | Q7Z3H4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |